tRNA genes clustered and arranged according to each identical group

Alphaproteobacteria

Anticodon = TCC

HIT: 4 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.328273 (7 seq.)
>PL171000283 CP000662 Alphaproteobacteria Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01 865180 865105 - Gly TCC [Ensembl] ¡û
>PL171001698 CP023549 Alphaproteobacteria Rhodobacter sp. CZR27 plasmid:unnamed1 255960 256035 + Gly TCC [ENA] ¡û
>CL171400002 CP000662 Alphaproteobacteria Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01 865180 865105 - Gly TCC [Ensembl] ¡û
>C191079681 CP031751 Alphaproteobacteria Cereibacter sphaeroides EBL0706 [CP031750, CP031751] 888485 888410 - Gly TCC - ¡û
>W09104752 AAME01000078 Alphaproteobacteria Cereibacter sphaeroides ATCC 17025 [AAME] 2777 2852 + Gly TCC [ENA] ¡û
>W1810119949 PHSI01000038 Alphaproteobacteria Cereibacter azotoformans YLK20 [PHSI] 71432 71507 + Gly TCC [ENA] ¡û
>W1810477374 QAOT01000010 Alphaproteobacteria Cereibacter azotoformans KA25 [QAOT] 117396 117321 - Gly TCC [ENA] ¡û
Identical group No.475175 (1 seq.)
>PL191000895 CP031358 Alphaproteobacteria Erythrobacter sp. YH-07 plasmid:unnamed (CP031358) 218415 218341 - Gly TCC [ENA] ¡û
Identical group No.488318 (159 seq.)
>W131184832 ARTG01000003 Alphaproteobacteria Hyphomicrobium zavarzinii ATCC 27496 [ARTG] 100446 100373 - Gly TCC [ENA] ¡û
>W131214653 ATUJ01000003 Alphaproteobacteria Paracoccus zeaxanthinifaciens ATCC 21588 [ATUJ] 315381 315454 + Gly TCC [ENA] ¡û
>W131227861 AUFM01000018 Alphaproteobacteria Nisaea denitrificans DSM 18348 [AUFM] 636 563 - Gly TCC [ENA] ¡û
>W1711642833 MPZQ01000002 Alphaproteobacteria Thioclava sp. F28-4 [MPZQ] 595998 595925 - Gly TCC [ENA] ¡û
>W1711642873 MPZR01000002 Alphaproteobacteria Thioclava sp. F36-7 [MPZR] 194964 195037 + Gly TCC [ENA] ¡û
>W1711642924 MPZS01000001 Alphaproteobacteria Thioclava marina 11.10-0-13 [MPZS] 1258196 1258123 - Gly TCC [ENA] ¡û
>W1711642966 MPZT01000002 Alphaproteobacteria Thioclava sp. DLFJ4-1 [MPZT] 366501 366428 - Gly TCC [ENA] ¡û
>W1711643034 MPZU01000005 Alphaproteobacteria Thioclava sp. DLFJ5-1 [MPZU] 22601 22528 - Gly TCC [ENA] ¡û
>W1711643063 MPZV01000002 Alphaproteobacteria Thioclava sediminum TAW-CT134 [MPZV] 420229 420156 - Gly TCC [ENA] ¡û
>W1711643098 MPZW01000001 Alphaproteobacteria Thioclava sp. L04-15 [MPZW] 394169 394096 - Gly TCC [ENA] ¡û
>W1711643156 MPZX01000002 Alphaproteobacteria Thioclava sp. F36-6 [MPZX] 852571 852498 - Gly TCC [ENA] ¡û
>W1711947205 NBNX01000003 Alphaproteobacteria Thioclava sp. IC9 [NBNX] 294184 294111 - Gly TCC [ENA] ¡û
>W1711947248 NBNY01000002 Alphaproteobacteria Thioclava sp. F1Mire-8 [NBNY] 333165 333238 + Gly TCC [ENA] ¡û
>W1711947283 NBNZ01000002 Alphaproteobacteria Thioclava sp. F42-5 [NBNZ] 308436 308509 + Gly TCC [ENA] ¡û
>W1711947325 NBOA01000002 Alphaproteobacteria Thioclava sp. F34-6 [NBOA] 308325 308398 + Gly TCC [ENA] ¡û
>W1711947394 NBOB01000006 Alphaproteobacteria Thioclava sp. JM3 [NBOB] 325842 325915 + Gly TCC [ENA] ¡û
>W1711958983 NBXF01000002 Alphaproteobacteria Thioclava electrotropha ElOx9 [NBXF] 4939 5012 + Gly TCC [ENA] ¡û
>W1712104739 NIPZ01000009 Alphaproteobacteria Paracoccus yeei [NIPZ] 1157 1084 - Gly TCC [ENA] ¡û
>C171094358 CP019437 Alphaproteobacteria Thioclava nitratireducens 25B10_4 [CP019437] 3467429 3467356 - Gly TCC - ¡û
>C016043 CP000489 Alphaproteobacteria Paracoccus denitrificans PD1222 [CP000489, CP000490] 506176 506103 - Gly TCC [Ensembl] ¡û
>WENV180101797 OAOW01019925 [OAOW] marine metagenome; ENVO.00002110 298 225 - Gly TCC [ENA] ¢þ
>WENV180210185 OBAL01146826 [OBAL] marine metagenome; ENVO:00002019, 'BRACKISH WATER 185 258 + Gly TCC [ENA] ¢þ
>WENV180360240 OBNT01027901 [OBNT] marine metagenome; Sea Water 438 365 - Gly TCC [ENA] ¢þ
>WENV180364695 OBOA01084944 [OBOA] marine metagenome; Deep Chlorophyll Maximum 199 272 + Gly TCC [ENA] ¢þ
>WENV180376899 OBOM01136978 [OBOM] marine metagenome; Seawater 229 302 + Gly TCC [ENA] ¢þ
>W141065843 AQRC01000001 Alphaproteobacteria Thioclava atlantica 13D2W-2 [AQRC] 200700 200773 + Gly TCC [ENA] ¡û
>W141082597 AUND01000023 Alphaproteobacteria Thioclava pacifica DSM 10166 [AUND] 341382 341455 + Gly TCC [ENA] ¡û
>WENV181169802 OEIV010010513 [OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 2370 2297 - Gly TCC [ENA] ¢þ
>WENV181226749 OFDN01000035 [OFDN] hot springs metagenome; Water 130035 129962 - Gly TCC [ENA] ¢þ
>W141199840 AYXI01000063 Alphaproteobacteria Defluviimonas sp. 20V17 [AYXI] 956 1029 + Gly TCC [ENA] ¡û
>W141277364 JAEN01000012 Alphaproteobacteria Paracoccus sp. J39 [JAEN] 62948 63021 + Gly TCC [ENA] ¡û
>W141278386 JAFM01000001 Alphaproteobacteria Hyphomicrobium sp. 802 [JAFM] 2139105 2139178 + Gly TCC [ENA] ¡û
>W141279569 JAGK01000003 Alphaproteobacteria Paracoccus pantotrophus J40 [JAGK] 61020 61093 + Gly TCC [ENA] ¡û
>WENV183360377 OLXI01017164 [OLXI] human gut metagenome; feces 312 385 + Gly TCC [ENA] ¢þ
>WENV183698728 OZSS01003703 [OZSS] metagenome; Seawater sample 1570 1643 + Gly TCC [ENA] ¢þ
>WENV183725114 PJQE01157630 [PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane 364 291 - Gly TCC [ENA] ¢þ
>WENV183729358 PJTQ01027371 [PJTQ] soil metagenome; Soil (3) enriched on wood chips 606 679 + Gly TCC [ENA] ¢þ
>WENV170000048 AERA01003072 [AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant 4102 4029 - Gly TCC [ENA] ¢þ
>WENV170014042 AVFP01003277 [AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh 1779 1706 - Gly TCC [ENA] ¢þ
>WENV170113340 CENF01059276 [CENF] marine metagenome genome assembly TARA_004_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 378 305 - Gly TCC [ENA] ¢þ
>WENV170122210 CENN01056466 [CENN] marine metagenome genome assembly TARA_023_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 218 291 + Gly TCC [ENA] ¢þ
>WENV170126373 CENP01110692 [CENP] marine metagenome genome assembly TARA_030_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1605 1678 + Gly TCC [ENA] ¢þ
>WENV170126746 CENP01146971 [CENP] marine metagenome genome assembly TARA_030_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 258 185 - Gly TCC [ENA] ¢þ
>WENV170133923 CENU01062426 [CENU] marine metagenome genome assembly TARA_025_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2489 2416 - Gly TCC [ENA] ¢þ
>WENV170157625 CEOJ01076508 [CEOJ] marine metagenome genome assembly TARA_034_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 182 255 + Gly TCC [ENA] ¢þ
>WENV170178513 CEOV01050269 [CEOV] marine metagenome genome assembly TARA_062_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 328 255 - Gly TCC [ENA] ¢þ
>WENV170188675 CEPB01069090 [CEPB] marine metagenome genome assembly TARA_057_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 217 144 - Gly TCC [ENA] ¢þ
>WENV170206995 CEPU01031501 [CEPU] marine metagenome genome assembly TARA_041_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2349 2276 - Gly TCC [ENA] ¢þ
>WENV170223086 CEQD01103105 [CEQD] marine metagenome genome assembly TARA_042_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 212 285 + Gly TCC [ENA] ¢þ
>WENV170232587 CEQI01077706 [CEQI] marine metagenome genome assembly TARA_076_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 465 538 + Gly TCC [ENA] ¢þ
>WENV170236997 CEQM01024270 [CEQM] marine metagenome genome assembly TARA_078_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 205 278 + Gly TCC [ENA] ¢þ
>WENV170242792 CEQO01084780 [CEQO] marine metagenome genome assembly TARA_078_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 248 175 - Gly TCC [ENA] ¢þ
>WENV170250167 CEQS01072002 [CEQS] marine metagenome genome assembly TARA_072_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 119 192 + Gly TCC [ENA] ¢þ
>WENV170256220 CEQX01061908 [CEQX] marine metagenome genome assembly TARA_070_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 103 176 + Gly TCC [ENA] ¢þ
>WENV170278756 CERQ01125270 [CERQ] marine metagenome genome assembly TARA_065_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 7361 7288 - Gly TCC [ENA] ¢þ
>WENV170285277 CERV01153990 [CERV] marine metagenome genome assembly TARA_068_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 356 429 + Gly TCC [ENA] ¢þ
>WENV170296098 CESD01139861 [CESD] marine metagenome genome assembly TARA_098_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 320 247 - Gly TCC [ENA] ¢þ
>WENV170311665 CESM01169508 [CESM] marine metagenome genome assembly TARA_102_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 289 216 - Gly TCC [ENA] ¢þ
>WENV170311866 CESM01195760 [CESM] marine metagenome genome assembly TARA_102_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 344 271 - Gly TCC [ENA] ¢þ
>WENV170331821 CESW01097494 [CESW] marine metagenome genome assembly TARA_096_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3605 3678 + Gly TCC [ENA] ¢þ
>WENV170355828 CETI01434383 [CETI] marine metagenome genome assembly TARA_111_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1 74 + Gly TCC [ENA] ¢þ
>WENV170364610 CETM01363414 [CETM] marine metagenome genome assembly TARA_122_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 640 713 + Gly TCC [ENA] ¢þ
>WENV170369822 CETR01037184 [CETR] marine metagenome genome assembly TARA_112_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1992 2065 + Gly TCC [ENA] ¢þ
>WENV170375588 CETU01004508 [CETU] marine metagenome genome assembly TARA_142_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 190 117 - Gly TCC [ENA] ¢þ
>WENV170376884 CETU01106774 [CETU] marine metagenome genome assembly TARA_142_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1210 1137 - Gly TCC [ENA] ¢þ
>WENV170380460 CETW01043332 [CETW] marine metagenome genome assembly TARA_052_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2228 2301 + Gly TCC [ENA] ¢þ
>WENV170402843 CEUF01002176 [CEUF] marine metagenome genome assembly TARA_138_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1681 1754 + Gly TCC [ENA] ¢þ
>WENV170437200 CEUU01019916 [CEUU] marine metagenome genome assembly TARA_122_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 186 113 - Gly TCC [ENA] ¢þ
>WENV170440940 CEUV01139522 [CEUV] marine metagenome genome assembly TARA_123_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1081 1154 + Gly TCC [ENA] ¢þ
>WENV170469734 CEVF01138231 [CEVF] marine metagenome genome assembly TARA_124_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 367 440 + Gly TCC [ENA] ¢þ
>WENV170470717 CEVG01005346 [CEVG] marine metagenome genome assembly TARA_140_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1046 973 - Gly TCC [ENA] ¢þ
>WENV170476474 CEVI01115069 [CEVI] marine metagenome genome assembly TARA_142_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 539 466 - Gly TCC [ENA] ¢þ
>WENV170486692 CEVN01350061 [CEVN] marine metagenome genome assembly TARA_142_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 977 904 - Gly TCC [ENA] ¢þ
>WENV170488605 CEVO01242154 [CEVO] marine metagenome genome assembly TARA_152_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 421 494 + Gly TCC [ENA] ¢þ
>WENV170494799 CEVR01129306 [CEVR] marine metagenome genome assembly TARA_148_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 193 266 + Gly TCC [ENA] ¢þ
>WENV170517137 CEWE01012525 [CEWE] marine metagenome genome assembly TARA_124_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1433 1360 - Gly TCC [ENA] ¢þ
>WENV170564873 CZPY01000014 [CZPY] metagenome; PAHs-polluted Soil 278967 279040 + Gly TCC [ENA] ¢þ
>WENV170579717 FUFK010040522 [FUFK] metagenome; unknown 43162 43089 - Gly TCC [ENA] ¢þ
>WENV170585115 FUFK010262117 [FUFK] metagenome; unknown 1205 1132 - Gly TCC [ENA] ¢þ
>WENV170588587 FUFK010574519 [FUFK] metagenome; unknown 416 489 + Gly TCC [ENA] ¢þ
>WENV170590512 FUFK010721095 [FUFK] metagenome; unknown 4853 4926 + Gly TCC [ENA] ¢þ
>WENV170591896 FUFK010792128 [FUFK] metagenome; unknown 6116 6189 + Gly TCC [ENA] ¢þ
>WENV170592398 FUFK010806140 [FUFK] metagenome; unknown 427 500 + Gly TCC [ENA] ¢þ
>WENV170592427 FUFK010806443 [FUFK] metagenome; unknown 5381 5308 - Gly TCC [ENA] ¢þ
>WENV170593559 FUFK010910198 [FUFK] metagenome; unknown 180 107 - Gly TCC [ENA] ¢þ
>WENV170594501 FUFK011337132 [FUFK] metagenome; unknown 238 165 - Gly TCC [ENA] ¢þ
>WENV170647067 JQIA01009265 [JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead 4936 4863 - Gly TCC [ENA] ¢þ
>WENV170747449 LUMC01006349 [LUMC] marine metagenome; Red Sea water column Station 91 - depth 10m 688 615 - Gly TCC [ENA] ¢þ
>WENV170772397 LXNI01029838 [LXNI] sponge metagenome; marine sponge reef 391 318 - Gly TCC [ENA] ¢þ
>WENV170803025 MDSW01023472 [MDSW] marine metagenome; seawater 13170 13097 - Gly TCC [ENA] ¢þ
>WENV170832470 MDSZ01063104 [MDSZ] marine metagenome; seawater 85 158 + Gly TCC [ENA] ¢þ
>WENV170874997 MDTC01014552 [MDTC] marine metagenome; seawater 465 538 + Gly TCC [ENA] ¢þ
>WENV170877840 MDTC01065444 [MDTC] marine metagenome; seawater 2327 2254 - Gly TCC [ENA] ¢þ
>WENV170889420 MDTC01274510 [MDTC] marine metagenome; seawater 3586 3659 + Gly TCC [ENA] ¢þ
>WENV170908767 MDTE01068933 [MDTE] marine metagenome; seawater 2491 2418 - Gly TCC [ENA] ¢þ
>WENV170959252 MKWU01003749 [MKWU] sponge metagenome; 11517 11444 - Gly TCC [ENA] ¢þ
>WENV170959495 MKWU01005444 [MKWU] sponge metagenome; 13436 13363 - Gly TCC [ENA] ¢þ
>WENV170960267 MKWU01021876 [MKWU] sponge metagenome; 1857 1930 + Gly TCC [ENA] ¢þ
>PL191000072 CP000489 Alphaproteobacteria Paracoccus denitrificans PD1222 plasmid:phage/plasmid primase, P4 family (CP000489) 506176 506103 - Gly TCC [Ensembl] ¡û
>C181117191 CP025430 Alphaproteobacteria Paracoccus zhejiangensis J6 [CP025430] 3828921 3828848 - Gly TCC - ¡û
>C181119695 CP025583 Alphaproteobacteria Paracoccus jeotgali CBA4604 [CP025583] 282426 282353 - Gly TCC - ¡û
>C191134387 CP035090 Alphaproteobacteria Paracoccus denitrificans ATCC 19367 [CP035090, CP035091] 2100575 2100502 - Gly TCC - ¡û
>W141558886 JHWH01000033 Alphaproteobacteria Paracoccus yeei ATCC BAA-599 [JHWH] 1457 1384 - Gly TCC [ENA] ¡û
>W09103048 AAIT01000005 Alphaproteobacteria Paracoccus denitrificans PD1222 [AAIT] 160284 160357 + Gly TCC [ENA] ¡û
>W09135221 ACVL01000013 Alphaproteobacteria Hyphomicrobium denitrificans ATCC 51888 [ACVL] 35493 35566 + Gly TCC [ENA] ¡û
>WENV025053 AACY020857361 Marine microbial communities from Global Ocean Sampling (GOS) 421 494 + Gly TCC [ENA]
>C141006331 CP006650 Alphaproteobacteria Paracoccus aminophilus JCM 7686 [CP006650] 2707431 2707504 + Gly TCC [Ensembl] ¡û
>W1910547056 FZNM01000001 Alphaproteobacteria Paracoccus sediminis DSM 26170 [FZNM] 563980 564053 + Gly TCC [ENA] ¡û
>W1910549857 FZQB01000002 Alphaproteobacteria Paracoccus seriniphilus DSM 14827 [FZQB] 294933 295006 + Gly TCC [ENA] ¡û
>W1910693595 MDGM01000012 Alphaproteobacteria Amylibacter kogurei 4G11 [MDGM] 569247 569320 + Gly TCC [ENA] ¡û
>W1911397910 NWMQ01000008 Alphaproteobacteria Paracoccus sp. SY [NWMQ] 124549 124476 - Gly TCC [ENA] ¡û
>W1911575822 PDJO01000001 Alphaproteobacteria Thioclava sp. ES.031 [PDJO] 3353424 3353351 - Gly TCC [ENA] ¡û
>W1911698491 QNRC01000004 Alphaproteobacteria Paracoccus siganidrum M26 [QNRC] 191918 191845 - Gly TCC [ENA] ¡û
>W1911810947 QZCG01000001 Alphaproteobacteria Paracoccus onubensis 1011MAR3C25 [QZCG] 401345 401272 - Gly TCC [ENA] ¡û
>W1810120340 PHSN01000007 Alphaproteobacteria Acidimangrovimonas sediminis MS2-2 [PHSN] 164134 164207 + Gly TCC [ENA] ¡û
>W1810235971 PPGA01000002 Alphaproteobacteria Paracoccus denitrificans ISTOD1 [PPGA] 76306 76233 - Gly TCC [ENA] ¡û
>W1810385259 PXNQ01000003 Alphaproteobacteria Paracoccus methylarcula VKM B-2159 [PXNQ] 383344 383417 + Gly TCC [ENA] ¡û
>W1810584514 QFBB01000001 Alphaproteobacteria Thioclava sp. NG1 [QFBB] 321403 321330 - Gly TCC [ENA] ¡û
>W1810750753 QOZU01000103 Alphaproteobacteria Paracoccus pantotrophus KS1 [QOZU] 491 564 + Gly TCC [ENA] ¡û
>W1810759490 QPJL01000017 Alphaproteobacteria Paracoccus lutimaris CECT 8525 [QPJL] 35207 35134 - Gly TCC [ENA] ¡û
>W1810789274 QRGC01000005 Alphaproteobacteria Oceanicella sp. SM1341 [QRGC] 69856 69783 - Gly TCC [ENA] ¡û
>W1810862272 QTUJ01000004 Alphaproteobacteria Paracoccus versutus DSM 17099 [QTUJ] 358161 358234 + Gly TCC [ENA] ¡û
>W1810884833 QUMX01000001 Alphaproteobacteria Paracoccus versutus DSM 582 [QUMX] 236830 236903 + Gly TCC [ENA] ¡û
>WENV003078 AACY020084046 Marine microbial communities from Global Ocean Sampling (GOS) 649 576 - Gly TCC [ENA]
>WENV031863 AACY021399954 Marine microbial communities from Global Ocean Sampling (GOS) 214 141 - Gly TCC [ENA]
>WENV032449 AACY021448010 Marine microbial communities from Global Ocean Sampling (GOS) 258 185 - Gly TCC [ENA]
>WENV032796 AACY021475577 Marine microbial communities from Global Ocean Sampling (GOS) 785 858 + Gly TCC [ENA]
>WENV003351 AACY020091265 Marine microbial communities from Global Ocean Sampling (GOS) 1179 1106 - Gly TCC [ENA]
>W1510072664 CDHO01000003 Alphaproteobacteria Hyphomicrobium sp. GJ21 [CDHO] 102764 102691 - Gly TCC [ENA] ¡û
>WENV036176 AACY021755774 Marine microbial communities from Global Ocean Sampling (GOS) 132 205 + Gly TCC [ENA]
>C10107524 CP002083 Alphaproteobacteria Hyphomicrobium denitrificans ATCC 51888 [CP002083] 1054511 1054584 + Gly TCC [Ensembl] ¡û
>WENV037012 AACY021825794 Marine microbial communities from Global Ocean Sampling (GOS) 703 628 - Gly TCC [ENA]
>WENV11100406 AERA01003072 [AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant 4102 4029 - Gly TCC [ENA] ¡û
>WENV038133 AACY021909991 Marine microbial communities from Global Ocean Sampling (GOS) 430 355 - Gly TCC [ENA]
>C11111372 FQ859181 Alphaproteobacteria Hyphomicrobium sp. MC1 [FQ859181] 1565335 1565408 + Gly TCC [Ensembl] ¡û
>W1511348538 JRKN01000001 Alphaproteobacteria Paracoccus halophilus JCM 14014 [JRKN] 164749 164676 - Gly TCC [ENA] ¡û
>W1511348696 JRKQ01000044 Alphaproteobacteria Paracoccus sanguinis 5503 [JRKQ] 4399 4472 + Gly TCC [ENA] ¡û
>W1511348742 JRKR01000059 Alphaproteobacteria Paracoccus sanguinis 10990 [JRKR] 14930 14857 - Gly TCC [ENA] ¡û
>W1511348814 JRKT01000008 Alphaproteobacteria Paracoccus sanguinis 4681 [JRKT] 35836 35909 + Gly TCC [ENA] ¡û
>W11143035 AEPN01000004 Alphaproteobacteria Paracoccus sp. TRP [AEPN] 28440 28513 + Gly TCC [ENA] ¡û
>WENV045650 AACY022537865 Marine microbial communities from Global Ocean Sampling (GOS) 669 742 + Gly TCC [ENA]
>WENV048688 AACY022746798 Marine microbial communities from Global Ocean Sampling (GOS) 462 537 + Gly TCC [ENA]
>W11181124 AGIS01000009 Alphaproteobacteria Hyphomicrobium denitrificans 1NES1 [AGIS] 4059 4132 + Gly TCC [ENA] ¡û
>WENV005081 AACY020141797 Marine microbial communities from Global Ocean Sampling (GOS) 333 408 + Gly TCC [ENA]
>WENV059643 AACY023371820 Marine microbial communities from Global Ocean Sampling (GOS) 483 556 + Gly TCC [ENA]
>WENV068107 AACY023715035 Marine microbial communities from Global Ocean Sampling (GOS) 1248 1321 + Gly TCC [ENA]
>WENV070347 AACY023805815 Marine microbial communities from Global Ocean Sampling (GOS) 284 357 + Gly TCC [ENA]
>C131015828 CP005587 Alphaproteobacteria Hyphomicrobium denitrificans 1NES1 [CP005587] 2015078 2015005 - Gly TCC [Ensembl] ¡û
>WENV073054 AACY023908668 Marine microbial communities from Global Ocean Sampling (GOS) 240 313 + Gly TCC [ENA]
>W1710518464 FNEA01000011 Alphaproteobacteria Paracoccus denitrificans [FNEA] 27439 27512 + Gly TCC [ENA] ¡û
>W1710528213 FNNA01000002 Alphaproteobacteria Paracoccus sanguinis [FNNA] 855643 855570 - Gly TCC [ENA] ¡û
>W1710553402 FOHO01000005 Alphaproteobacteria Paracoccus homiensis [FOHO] 82503 82576 + Gly TCC [ENA] ¡û
>W1710555537 FOJO01000002 Alphaproteobacteria Paracoccus halophilus [FOJO] 194999 195072 + Gly TCC [ENA] ¡û
>W1710571553 FOWA01000004 Alphaproteobacteria Paracoccus pantotrophus [FOWA] 131232 131159 - Gly TCC [ENA] ¡û
>W1710574685 FOYK01000011 Alphaproteobacteria Paracoccus denitrificans [FOYK] 27152 27225 + Gly TCC [ENA] ¡û
>W1710579371 FPCH01000004 Alphaproteobacteria Hyphomicrobium facile [FPCH] 188072 187999 - Gly TCC [ENA] ¡û
>W1710581749 FPKI01000002 Alphaproteobacteria Paracoccus pantotrophus [FPKI] 235878 235951 + Gly TCC [ENA] ¡û
>W1710592387 FRCK01000007 Alphaproteobacteria Paracoccus solventivorans [FRCK] 45630 45557 - Gly TCC [ENA] ¡û
>W1710596184 FTMK01000005 Alphaproteobacteria Paracoccus thiocyanatus [FTMK] 32868 32795 - Gly TCC [ENA] ¡û
Identical group No.507729 (58 seq.)
>W1710785585 LJHZ01000046 Alphaproteobacteria Novosphingobium sp. AAP93 [LJHZ] 18525 18452 - Gly TCC [ENA] ¡û
>W1710856884 LLZS01000003 Alphaproteobacteria Novosphingobium fuchskuhlense [LLZS] 640923 640850 - Gly TCC [ENA] ¡û
>W1710869706 LMJY01000001 Alphaproteobacteria Novosphingobium sp. Leaf2 [LMJY] 245695 245768 + Gly TCC [ENA] ¡û
>W131058778 ANFX01000019 Alphaproteobacteria Porphyrobacter sp. AAP82 [ANFX] 73667 73594 - Gly TCC [ENA] ¡û
>W1711051697 LRSE01000005 Alphaproteobacteria Croceicoccus bisphenolivorans H4 [LRSE] 36481 36554 + Gly TCC [ENA] ¡û
>W1711072903 LSIA01000159 Alphaproteobacteria Novosphingobium sp. CCH12-A3 [LSIA] 12702 12775 + Gly TCC [ENA] ¡û
>W1711073913 LSJB01000029 Alphaproteobacteria Erythrobacter donghaensis [LSJB] 10785 10858 + Gly TCC [ENA] ¡û
>W1711074329 LSJK01000252 Alphaproteobacteria Erythrobacter donghaensis [LSJK] 19816 19889 + Gly TCC [ENA] ¡û
>W1711075226 LSKF01000107 Alphaproteobacteria Erythrobacteraceae bacterium CCH12-C2 [LSKF] 12870 12943 + Gly TCC [ENA] ¡û
>W1711075514 LSKM01000015 Alphaproteobacteria Erythrobacter donghaensis [LSKM] 32640 32567 - Gly TCC [ENA] ¡û
>W1711220332 LXQI01000024 Alphaproteobacteria Erythrobacter sp. ANT-B3C2 [LXQI] 8838 8765 - Gly TCC [ENA] ¡û
>W1711284869 LZRP01000002 Alphaproteobacteria Erythrobacter sp. QSSC1-22B [LZRP] 252157 252084 - Gly TCC [ENA] ¡û
>W1711292840 LZYB01000004 Alphaproteobacteria Erythrobacter dokdonensis DSW-74 [LZYB] 19788 19861 + Gly TCC [ENA] ¡û
>W1711705047 MSQB01000024 Alphaproteobacteria Novosphingobium panipatense [MSQB] 58642 58715 + Gly TCC [ENA] ¡û
>W1711766350 MUYH01000010 Alphaproteobacteria Erythrobacter sanguineus [MUYH] 64023 64096 + Gly TCC [ENA] ¡û
>W1711766394 MUYI01000001 Alphaproteobacteria Erythrobacter dokdonensis [MUYI] 874782 874709 - Gly TCC [ENA] ¡û
>W1711766433 MUYJ01000008 Alphaproteobacteria Erythrobacter tepidarius [MUYJ] 81162 81235 + Gly TCC [ENA] ¡û
>W1712049870 NFUS01000001 Alphaproteobacteria Sphingomonas sp. IBVSS1 [NFUS] 60331 60404 + Gly TCC [ENA] ¡û
>C171056580 CP017075 Alphaproteobacteria Novosphingobium resinovorum SA1 [CP017075] 3208217 3208290 + Gly TCC - ¡û
>WENV180019005 FTBF01000132 [FTBF] metagenome; soil 10275 10348 + Gly TCC [ENA] ¢þ
>WENV180019081 FTBG01000549 [FTBG] metagenome; soil 10698 10769 + Gly TCC [ENA] ¢þ
>WENV180689820 OCZB010100520 [OCZB] metagenome; Oyster Gut Contents 588 658 + Gly TCC [ENA] ¢þ
>WENV181223005 OFDC01001066 [OFDC] hot springs metagenome; Water 8698 8625 - Gly TCC [ENA] ¢þ
>WENV181223070 OFDC01001682 [OFDC] hot springs metagenome; Water 2719 2792 + Gly TCC [ENA] ¢þ
>WENV181223660 OFDC01062248 [OFDC] hot springs metagenome; Water 8 81 + Gly TCC [ENA] ¢þ
>WENV181226928 OFDN01000451 [OFDN] hot springs metagenome; Water 1459 1532 + Gly TCC [ENA] ¢þ
>WENV183734021 PJTZ01000020 [PJTZ] soil metagenome; Soil enriched (2) on filter paper 235609 235682 + Gly TCC [ENA] ¢þ
>WENV183738296 PJUD01152784 [PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment 91 18 - Gly TCC [ENA] ¢þ
>WENV183738676 PJUE01000086 [PJUE] feces metagenome; Chicken feces (3) enriched on wood chips: alkali lignin treatment 35741 35668 - Gly TCC [ENA] ¢þ
>WENV183739143 PJUE01002264 [PJUE] feces metagenome; Chicken feces (3) enriched on wood chips: alkali lignin treatment 2111 2038 - Gly TCC [ENA] ¢þ
>WENV183748695 PPFU01069938 [PPFU] hypolithon metagenome; Antarctic Hypolithon 1538 1609 + Gly TCC [ENA] ¢þ
>WENV183749348 PPFU01154066 [PPFU] hypolithon metagenome; Antarctic Hypolithon 1338 1411 + Gly TCC [ENA] ¢þ
>WENV170136364 CENV01026698 [CENV] marine metagenome genome assembly TARA_031_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 11360 11287 - Gly TCC [ENA] ¢þ
>WENV171003034 NKIC01007426 [NKIC] algae metagenome; Clonal culture of Asterionella formosa BG1 isolated from Esthwaite Water 39 112 + Gly TCC [ENA] ¢þ
>PL191000686 CP028348 Alphaproteobacteria Novosphingobium sp. THN1 plasmid:pTHN (CP028348) 742313 742240 - Gly TCC [ENA] ¡û
>W141484960 JFYZ01000029 Alphaproteobacteria Novosphingobium resinovorum [JFYZ] 564 491 - Gly TCC [ENA] ¡û
>C191121075 CP034179 Alphaproteobacteria Caenibius tardaugens NBRC 16725 [CP034179] 4220735 4220808 + Gly TCC - ¡û
>W141820299 JQMU01000001 Alphaproteobacteria Porphyrobacter sp. HL-46 [JQMU] 1518780 1518853 + Gly TCC [ENA] ¡û
>W1810676609 QKMD01000002 Alphaproteobacteria Novosphingobium sp. GV010 [QKMD] 380899 380826 - Gly TCC [ENA] ¡û
>W1511357019 JRVC01000014 Alphaproteobacteria Novosphingobium subterraneum DSM 12447 [JRVC] 171685 171758 + Gly TCC [ENA] ¡û
>W1511398375 JTDN01000002 Alphaproteobacteria Croceibacterium mercuriale Coronado [JTDN] 362248 362175 - Gly TCC [ENA] ¡û
>W1511519435 JXZE01000022 Alphaproteobacteria Novosphingobium sp. P6W [JXZE] 295 222 - Gly TCC [ENA] ¡û
>W1511591716 LBHU01000001 Alphaproteobacteria Aurantiacibacter marinus HWDM-33 [LBHU] 998377 998450 + Gly TCC [ENA] ¡û
>W121081089 AKFJ01000101 Alphaproteobacteria Novosphingobium sp. Rr 2-17 [AKFJ] 85186 85259 + Gly TCC [ENA] ¡û
>W121119213 ALVC01000041 Alphaproteobacteria Sphingomonas sp. LH128 [ALVC] 2456 2529 + Gly TCC [ENA] ¡û
>W1610649391 LJHZ01000046 Alphaproteobacteria Novosphingobium sp. AAP93 [LJHZ] 18525 18452 - Gly TCC [ENA] ¡û
>W1610719265 LLZS01000003 Alphaproteobacteria Novosphingobium fuchskuhlense [LLZS] 640923 640850 - Gly TCC [ENA] ¡û
>W1610732052 LMJY01000001 Alphaproteobacteria Novosphingobium sp. Leaf2 [LMJY] 245695 245768 + Gly TCC [ENA] ¡û
>W1610892826 LRSE01000005 Alphaproteobacteria Croceicoccus bisphenolivorans H4 [LRSE] 36481 36554 + Gly TCC [ENA] ¡û
>W1610912163 LSIA01000159 Alphaproteobacteria Novosphingobium sp. CCH12-A3 [LSIA] 12702 12775 + Gly TCC [ENA] ¡û
>W1610913218 LSJB01000029 Alphaproteobacteria Erythrobacter donghaensis [LSJB] 10785 10858 + Gly TCC [ENA] ¡û
>W1610913634 LSJK01000252 Alphaproteobacteria Erythrobacter donghaensis [LSJK] 19816 19889 + Gly TCC [ENA] ¡û
>W1610914531 LSKF01000107 Alphaproteobacteria Erythrobacteraceae bacterium CCH12-C2 [LSKF] 12870 12943 + Gly TCC [ENA] ¡û
>W1610914819 LSKM01000015 Alphaproteobacteria Erythrobacter donghaensis [LSKM] 32640 32567 - Gly TCC [ENA] ¡û
>W1611004804 LXQI01000024 Alphaproteobacteria Erythrobacter sp. ANT-B3C2 [LXQI] 8838 8765 - Gly TCC [ENA] ¡û
>W1611042654 LZRP01000002 Alphaproteobacteria Erythrobacter sp. QSSC1-22B [LZRP] 252157 252084 - Gly TCC [ENA] ¡û
>W1611050056 LZYB01000004 Alphaproteobacteria Erythrobacter dokdonensis DSW-74 [LZYB] 19788 19861 + Gly TCC [ENA] ¡û
>W1710593229 FRDF01000015 Alphaproteobacteria Erythrobacter sanguineus [FRDF] 32304 32377 + Gly TCC [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK