Home | tRNADB-CE : tRNA gene database curated manually by experts

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tRNA genes clustered and arranged according to each identical group

Ant fungus garden metagenome, Atta colombica fungus garden

Anticodon = AGG

HIT: 1 Group(s).

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Sort by the number of tRNAs in the Identical group

Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision
Identical group No.687894 (21 seq.)
	>WENV170660083	JXWS01135110	[JXWS] soil metagenome; rice field; elevated CO2		336	265	-	Pro	AGG	[ENA]	◯
	>R05100007	AP008207	Plant	Oryza sativa Japonica Group	3733988	3734062	+	Pro	AGG	[RAP-DB]	○
	>R05100095	AP008217	Plant	Oryza sativa Japonica Group	26316075	26316149	+	Pro	AGG	[RAP-DB]	○
	>R05100098	AP008217	Plant	Oryza sativa Japonica Group	29565875	29565949	+	Pro	AGG	[RAP-DB]	○
	>R05100108	AP008217	Plant	Oryza sativa Japonica Group	2852729	2852655	-	Pro	AGG	[RAP-DB]	○
	>R05100125	AP008218	Plant	Oryza sativa Japonica Group	17758961	17759035	+	Pro	AGG	[RAP-DB]	○
	>R05100133	AP008218	Plant	Oryza sativa Japonica Group	21377829	21377903	+	Pro	AGG	[RAP-DB]	○
	>R05100135	AP008218	Plant	Oryza sativa Japonica Group	23120813	23120887	+	Pro	AGG	[RAP-DB]	○
	>R05100166	AP008218	Plant	Oryza sativa Japonica Group	3076246	3076172	-	Pro	AGG	[RAP-DB]	○
	>R05100377	AP008211	Plant	Oryza sativa Japonica Group	4262330	4262404	+	Pro	AGG	[RAP-DB]	○
	>R05100439	AP008212	Plant	Oryza sativa Japonica Group	24739183	24739109	-	Pro	AGG	[RAP-DB]	○
	>AD01000039	NC_003070	Plant	Arabidopsis thaliana	10099425	10099496	+	Pro	AGG	[TAIR]	○
	>AD01000090	NC_003070	Plant	Arabidopsis thaliana	25829654	25829725	+	Pro	AGG	[TAIR]	○
	>AD01000187	NC_003071	Plant	Arabidopsis thaliana	14353143	14353215	+	Pro	AGG	[TAIR]	○
	>AD01000191	NC_003071	Plant	Arabidopsis thaliana	14356055	14356126	+	Pro	AGG	[TAIR]	○
	>AD01000232	NC_003074	Plant	Arabidopsis thaliana	259634	259706	+	Pro	AGG	[TAIR]	○
	>AD01000259	NC_003074	Plant	Arabidopsis thaliana	11075578	11075649	+	Pro	AGG	[TAIR]	○
	>AD01000295	NC_003074	Plant	Arabidopsis thaliana	19392745	19392674	-	Pro	AGG	[TAIR]	○
	>AD01000316	NC_003075	Plant	Arabidopsis thaliana	1390895	1390966	+	Pro	AGG	[TAIR]	○
	>AD01000455	NC_003076	Plant	Arabidopsis thaliana	15827097	15827026	-	Pro	AGG	[TAIR]	○
	>WENV11100049	ADWX01006057	Ant fungus garden metagenome, Atta colombica fungus garden		227	299	+	Pro	AGG	[ENA]	○
Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision

Download Sequence	Representative sequence of each cluster
View ClustalW result

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