tRNA genes clustered and arranged according to each identical group

Ant fungus garden metagenome, Atta colombica fungus garden

Anticodon = GTC

HIT: 4 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.270805 (99 seq.)
>W1711183518 LWLC01000001 Actinomycetota Saccharothrix sp. CB00851 [LWLC] 573832 573756 - Asp GTC [ENA] ¡û
>W1711343468 MCIJ01000001 Actinomycetota Pseudonocardia sp. Ae150A_Ps1 [MCIJ] 3923319 3923393 + Asp GTC [ENA] ¡û
>W1711343520 MCIK01000001 Actinomycetota Pseudonocardia sp. Ae168_Ps1 [MCIK] 3926384 3926458 + Asp GTC [ENA] ¡û
>W1711343596 MCIL01000001 Actinomycetota Pseudonocardia sp. Ae263_Ps1 [MCIL] 1545383 1545309 - Asp GTC [ENA] ¡û
>W1711343620 MCIM01000001 Actinomycetota Pseudonocardia sp. Ae331_Ps2 [MCIM] 2693309 2693383 + Asp GTC [ENA] ¡û
>W1711343690 MCIN01000001 Actinomycetota Pseudonocardia sp. Ae356_Ps1 [MCIN] 5563867 5563941 + Asp GTC [ENA] ¡û
>W1711343767 MCIO01000001 Actinomycetota Pseudonocardia sp. Ae406_Ps2 [MCIO] 3381888 3381814 - Asp GTC [ENA] ¡û
>W1711343784 MCIP01000001 Actinomycetota Pseudonocardia sp. Ae505_Ps2 [MCIP] 2072741 2072815 + Asp GTC [ENA] ¡û
>W1711343875 MCIQ01000001 Actinomycetota Pseudonocardia sp. Ae706_Ps2 [MCIQ] 3385226 3385152 - Asp GTC [ENA] ¡û
>W1711343890 MCIR01000001 Actinomycetota Pseudonocardia sp. Ae707_Ps1 [MCIR] 501368 501442 + Asp GTC [ENA] ¡û
>W1711343938 MCIS01000001 Actinomycetota Pseudonocardia sp. Ae717_Ps2 [MCIS] 191214 191288 + Asp GTC [ENA] ¡û
>W1711386167 MEEZ01000194 Actinomycetota Pseudonocardia sp. SCN 72-51 [MEEZ] 15494 15420 - Asp GTC [ENA] ¡û
>W1711386193 MEFA01000070 Actinomycetota Pseudonocardia sp. SCN 72-86 [MEFA] 101 175 + Asp GTC [ENA] ¡û
>W1711387144 MEGH01000057 Actinomycetota Pseudonocardia sp. SCN 73-27 [MEGH] 37478 37552 + Asp GTC [ENA] ¡û
>W1711427802 MIFY01000024 Actinomycetota Pseudonocardia autotrophica [MIFY] 94376 94302 - Asp GTC [ENA] ¡û
>W1711427983 MIGB01000053 Actinomycetota Pseudonocardia autotrophica [MIGB] 8355 8281 - Asp GTC [ENA] ¡û
>W1711491745 MKJV01000074 Actinomycetota Pseudonocardia sp. CNS-004 [MKJV] 37374 37448 + Asp GTC [ENA] ¡û
>W1711491824 MKJX01000051 Actinomycetota Pseudonocardia sp. CNS-139 [MKJX] 601 527 - Asp GTC [ENA] ¡û
>W1711505770 MKVV01000024 Actinomycetota Pseudonocardia sp. 73-21 [MKVV] 135064 135138 + Asp GTC [ENA] ¡û
>W1711694663 MSIE01000037 Actinomycetota Actinophytocola xanthii 11-183 [MSIE] 11100 11174 + Asp GTC [ENA] ¡û
>W1711694728 MSIF01000044 Actinomycetota Actinophytocola xinjiangensis [MSIF] 36188 36114 - Asp GTC [ENA] ¡û
>W1711724902 MTQO01000053 Actinomycetota Actinosynnema sp. ALI-1.44 [MTQO] 644183 644259 + Asp GTC [ENA] ¡û
>W1711724961 MTQP01000068 Actinomycetota Saccharothrix sp. ALI-22-I [MTQP] 842352 842428 + Asp GTC [ENA] ¡û
>W1711749181 MUMH01000064 Actinomycetota Allokutzneria sp. NRRL B-24872 [MUMH] 99282 99358 + Asp GTC [ENA] ¡û
>W1711766528 MUYM01000056 Actinomycetota Lentzea kentuckyensis [MUYM] 62998 62924 - Asp GTC [ENA] ¡û
>C171050991 CP016793 Actinomycetota Lentzea guizhouensis DHS C013 [CP016793] 3301827 3301901 + Asp GTC - ¡û
>W131165113 ARBI01000002 Actinomycetota Actinomycetospora chiangmaiensis DSM 45062 [ARBI] 469896 469970 + Asp GTC [ENA] ¡û
>W131222183 AUBB01000016 Actinomycetota Pseudonocardia spinosispora DSM 44797 [AUBB] 161454 161528 + Asp GTC [ENA] ¡û
>W131231269 AUII01000015 Actinomycetota Pseudonocardia asaccharolytica DSM 44247 [AUII] 92914 92840 - Asp GTC [ENA] ¡û
>W141000349 ACQP01000285 Actinomycetota Kutzneria sp. 744 [ACQP] 34053 34129 + Asp GTC [ENA] ¡û
>WENV180691853 OCZS010240003 [OCZS] soil metagenome; soil 174 99 - Asp GTC [ENA] ¢þ
>WENV181292190 OFHD01052730 [OFHD] soil metagenome; Clay 181 107 - Asp GTC [ENA] ¢þ
>C181081526 CP023445 Actinomycetota Actinosynnema pretiosum X47 [CP023445] 7798244 7798170 - Asp GTC - ¡û
>C191005721 AP018920 Actinomycetota Pseudonocardia autotrophica NBRC 12743 [AP018920] 688260 688334 + Asp GTC - ¡û
>C191064798 CP029607 Actinomycetota Actinosynnema pretiosum subsp. pretiosum ATCC 31280 [CP029607] 8019940 8019866 - Asp GTC - ¡û
>W141563887 JIAI01000005 Actinomycetota Pseudonocardia acaciae DSM 45401 [JIAI] 460290 460364 + Asp GTC [ENA] ¡û
>W09108154 ABTA01000040 Actinomycetota Actinosynnema mirum DSM 43827 [ABTA] 32395 32471 + Asp GTC [ENA] ¡û
>W141756290 JNXC01000001 Actinomycetota Saccharothrix sp. NRRL B-16314 [JNXC] 597506 597582 + Asp GTC [ENA] ¡û
>W141757603 JNYA01000153 Actinomycetota Actinosynnema pretiosum subsp. auranticum [JNYA] 2903 2979 + Asp GTC [ENA] ¡û
>W141757791 JNYD01000029 Actinomycetota Pseudonocardia autotrophica [JNYD] 32431 32357 - Asp GTC [ENA] ¡û
>W141758271 JNYM01001205 Actinomycetota Kibdelosporangium aridum subsp. largum [JNYM] 2776 2702 - Asp GTC [ENA] ¡û
>W141758713 JNYU01000579 Actinomycetota Umezawaea tangerina [JNYU] 7763 7839 + Asp GTC [ENA] ¡û
>W141760439 JOAA01000019 Actinomycetota Rhodococcus rhodnii [JOAA] 229776 229700 - Asp GTC [ENA] ¡û
>W141766506 JOEA01000011 Actinomycetota Lentzea albidocapillata [JOEA] 191571 191645 + Asp GTC [ENA] ¡û
>W141768652 JOFI01000053 Actinomycetota Lentzea aerocolonigenes [JOFI] 62772 62698 - Asp GTC [ENA] ¡û
>W141771441 JOHE01000034 Actinomycetota Lentzea aerocolonigenes [JOHE] 1471 1545 + Asp GTC [ENA] ¡û
>W1910038444 BEGX01000128 Actinomycetota Pseudonocardia sp. N23 [BEGX] 272849 272775 - Asp GTC [ENA] ¡û
>W1910182894 BJNG01000030 Actinomycetota Pseudonocardia hydrocarbonoxydans NBRC 14498 [BJNG] 39041 39115 + Asp GTC [ENA] ¡û
>W1910182962 BJNH01000118 Actinomycetota Pseudonocardia saturnea NBRC 14499 [BJNH] 8713 8787 + Asp GTC [ENA] ¡û
>C09100638 CP001630 Actinomycetota Actinosynnema mirum DSM 43827 [CP001630] 7929869 7929793 - Asp GTC [Ensembl] ¡û
>W1910994828 NKYF01000001 Actinomycetota Pseudonocardia sp. MH-G8 [NKYF] 1378366 1378292 - Asp GTC [ENA] ¡û
>W1911679497 QHKI01000017 Actinomycetota Kibdelosporangium aridum A82846 [QHKI] 121692 121768 + Asp GTC [ENA] ¡û
>W1810121464 PHUJ01000003 Actinomycetota Pseudonocardia alni DSM 44104 [PHUJ] 3856304 3856378 + Asp GTC [ENA] ¡û
>W1810176383 PJPW02000019 Actinomycetota Pseudonocardia dioxanivorans BERK-1 [PJPW] 2127 2201 + Asp GTC [ENA] ¡û
>W1810364413 PVTF01000003 Actinomycetota Umezawaea tangerina DSM 44720 [PVTF] 71467 71541 + Asp GTC [ENA] ¡û
>W1810393092 PYAX01000006 Actinomycetota Saccharothrix carnea CGMCC 4.7097 [PYAX] 513991 513917 - Asp GTC [ENA] ¡û
>W1810573624 QEKW01000005 Actinomycetota Actinomycetospora cinnamomea DSM 45771 [QEKW] 80512 80586 + Asp GTC [ENA] ¡û
>W1810592225 QFWW01000035 Actinomycetota Lentzea terrae NEAU-LZS 42 [QFWW] 157099 157025 - Asp GTC [ENA] ¡û
>W1810597149 QGHB01000001 Actinomycetota Lentzea atacamensis DSM 45480 [QGHB] 262408 262334 - Asp GTC [ENA] ¡û
>W1810696991 QLTT01000002 Actinomycetota Lentzea atacamensis DSM 45479 [QLTT] 557229 557303 + Asp GTC [ENA] ¡û
>W1810763027 QQAU01000005 Actinomycetota Lentzea flaviverrucosa DSM 44664 [QQAU] 322257 322331 + Asp GTC [ENA] ¡û
>C151075007 CP010989 Actinomycetota Pseudonocardia sp. EC080625-04 [CP010989] 5103266 5103192 - Asp GTC - ¡û
>C151087147 CP011862 Actinomycetota Pseudonocardia sp. AL041005-10 [CP011862] 4077820 4077894 + Asp GTC - ¡û
>C151087203 CP011868 Actinomycetota Pseudonocardia sp. HH130629-09 [CP011868] 4839407 4839333 - Asp GTC - ¡û
>C151105072 LN850107 Actinomycetota Alloactinosynnema sp. L-07 [LN850107] 5499710 5499634 - Asp GTC - ¡û
>W1510013170 BBOJ01000037 Actinomycetota Lentzea aerocolonigenes NBRC 13195 [BBOJ] 64299 64225 - Asp GTC [ENA] ¡û
>W1510073598 CDME01000001 Actinomycetota Kibdelosporangium sp. MJ126-NF4 [CDME] 698 622 - Asp GTC [ENA] ¡û
>W10118426 ADUJ01000853 Actinomycetota Pseudonocardia sp. P1 [ADUJ] 2408 2334 - Asp GTC [ENA] ¡û
>W10128099 AEGE01000215 Actinomycetota Pseudonocardia sp. P2 [AEGE] 6839 6913 + Asp GTC [ENA] ¡û
>WENV11100186 ADWX01329114 Ant fungus garden metagenome, Atta colombica fungus garden 78 152 + Asp GTC [ENA] ¡û
>C11117067 CP002593 Actinomycetota Pseudonocardia dioxanivorans CB1190 [CP002593] 619031 619105 + Asp GTC [Ensembl] ¡û
>W11123501 ADUJ01000853 Actinomycetota Pseudonocardia sp. P1 [ADUJ] 2408 2334 - Asp GTC [ENA] ¡û
>W11136811 AEGE01000215 Actinomycetota Pseudonocardia sp. P2 [AEGE] 6839 6913 + Asp GTC [ENA] ¡û
>W1511529123 JYJG01000006 Actinomycetota Lentzea aerocolonigenes NRRL B-16140 [JYJG] 4315 4389 + Asp GTC [ENA] ¡û
>W1511697492 LGDY01000177 Actinomycetota Nocardia sp. NRRL S-836 [LGDY] 7925 7851 - Asp GTC [ENA] ¡û
>W1511697761 LGED01000262 Actinomycetota Saccharothrix sp. NRRL B-16348 [LGED] 29585 29661 + Asp GTC [ENA] ¡û
>C161040366 CP012181 Actinomycetota Pseudonocardia sp. EC080610-09 [CP012181] 594346 594272 - Asp GTC - ¡û
>C161040414 CP012184 Actinomycetota Pseudonocardia sp. EC080619-01 [CP012184] 2299323 2299249 - Asp GTC [Ensembl] ¡û
>C161045526 CP012752 Actinomycetota Kibdelosporangium phytohabitans KLBMP1111 [CP012752] 11367906 11367830 - Asp GTC [Ensembl] ¡û
>C161061315 CP013854 Actinomycetota Pseudonocardia sp. HH130630-07 [CP013854] 1703874 1703800 - Asp GTC [Ensembl] ¡û
>W1610050379 BBFU01000534 Actinomycetota Pseudonocardia tetrahydrofuranoxydans JCM 14745 [BBFU] 483 557 + Asp GTC [ENA] ¡û
>W1610051181 BBGP01000598 Actinomycetota Pseudonocardia chloroethenivorans JCM 12679 [BBGP] 998 1072 + Asp GTC [ENA] ¡û
>C131019814 HE804045 Actinomycetota Saccharothrix espanaensis DSM 44229 type strain: DSM 44229 [HE804045] 8967711 8967635 - Asp GTC [Ensembl] ¡û
>W1710046778 BBFU01000534 Actinomycetota Pseudonocardia tetrahydrofuranoxydans JCM 14745 [BBFU] 483 557 + Asp GTC [ENA] ¡û
>W1710047580 BBGP01000598 Actinomycetota Pseudonocardia chloroethenivorans JCM 12679 [BBGP] 998 1072 + Asp GTC [ENA] ¡û
>W1710514725 FNBE01000009 Actinomycetota Pseudonocardia oroxyli [FNBE] 40858 40932 + Asp GTC [ENA] ¡û
>W1710515768 FNCC01000002 Actinomycetota Lentzea fradiae [FNCC] 321501 321575 + Asp GTC [ENA] ¡û
>W1710518158 FNDV01000006 Actinomycetota Actinokineospora alba album [FNDV] 329852 329926 + Asp GTC [ENA] ¡û
>W1710519481 FNET01000012 Actinomycetota Lentzea albidocapillata violacea [FNET] 69594 69520 - Asp GTC [ENA] ¡û
>W1710524641 FNIX01000001 Actinomycetota Lentzea jiangxiensis [FNIX] 31597 31671 + Asp GTC [ENA] ¡û
>W1710524864 FNJB01000006 Actinomycetota Actinokineospora alba album [FNJB] 129256 129182 - Asp GTC [ENA] ¡û
>W1710550898 FOFR01000001 Actinomycetota Lentzea xinjiangensis [FOFR] 555378 555452 + Asp GTC [ENA] ¡û
>W1710551016 FOFT01000005 Actinomycetota Lentzea flaviverrucosa [FOFT] 213259 213185 - Asp GTC [ENA] ¡û
>W1710551137 FOFV01000008 Actinomycetota Lentzea albida [FOFV] 321308 321382 + Asp GTC [ENA] ¡û
>W1710570169 FOUY01000044 Actinomycetota Pseudonocardia ammonioxydans [FOUY] 43161 43235 + Asp GTC [ENA] ¡û
>W1710574767 FOYL01000019 Actinomycetota Lentzea waywayandensis [FOYL] 25237 25311 + Asp GTC [ENA] ¡û
>W1710589975 FRAP01000020 Actinomycetota Pseudonocardia thermophila [FRAP] 97864 97790 - Asp GTC [ENA] ¡û
>W1710606462 FWXV01000002 Actinomycetota Kibdelosporangium aridum [FWXV] 970052 969978 - Asp GTC [ENA] ¡û
>W1710606830 FWYC01000009 Actinomycetota Lentzea albidocapillata [FWYC] 60110 60036 - Asp GTC [ENA] ¡û
Identical group No.297529 (30 seq.)
>CHL1810000647 AP014632 Viridiplantae Ananas comosus (AP014632) 33094 33019 - Asp GTC [ENA] ¡û
>CHL1810002622 GU456628 Viridiplantae Anthriscus cerefolium (GU456628) 31212 31136 - Asp GTC [ENA] ¡û
>CHL1810003455 HQ207704 Viridiplantae Corynocarpus laevigatus (HQ207704) 32690 32615 - Asp GTC [ENA] ¡û
>CHL1810003770 HQ337793 Viridiplantae Acidosasa purpurea (HQ337793) 17538 17611 + Asp GTC [ENA] ¡û
>CHL1810006452 JX513422 Viridiplantae Indosasa sinica (JX513422) 17546 17619 + Asp GTC [ENA] ¡û
>CHL1810006481 JX513423 Viridiplantae Oligostachyum shiuyingianum (JX513423) 17534 17607 + Asp GTC [ENA] ¡û
>CHL1810006510 JX513424 Viridiplantae Pleioblastus maculatus (JX513424) 17546 17619 + Asp GTC [ENA] ¡û
>CHL1810010500 KF572029 Viridiplantae Lagerstroemia subcostata (KF572029) 29546 29470 - Asp GTC [ENA] ¡û
>CHL1810011381 KJ206533 Viridiplantae Paeonia obovata (KJ206533) 31342 31269 - Asp GTC [ENA] ¡û
>CHL1810012867 KJ788285 Viridiplantae Trifolium glanduliferum (KJ788285) 31434 31510 + Asp GTC [ENA] ¡û
>CHL1810012890 KJ788292 Viridiplantae Trifolium strictum (KJ788292) 31571 31647 + Asp GTC [ENA] ¡û
>CHL1810020910 KT358807 Viridiplantae Lagerstroemia fauriei (KT358807) 29577 29501 - Asp GTC [ENA] ¡û
>CHL1810023371 KT894821 Viridiplantae Paeonia veitchii (KT894821) 31299 31226 - Asp GTC [ENA] ¡û
>CHL1810027733 KU821692 Viridiplantae Lagerstroemia speciosa (KU821692) 29807 29731 - Asp GTC [ENA] ¡û
>CHL1810027982 KU885923 Viridiplantae Lagerstroemia guilinensis (KU885923) 29671 29595 - Asp GTC [ENA] ¡û
>CHL1810032679 KX263727 Viridiplantae Lagerstroemia indica (KX263727) 29665 29589 - Asp GTC [ENA] ¡û
>CHL1810035360 KX765488 Viridiplantae Lagerstroemia floribunda (KX765488) 29451 29375 - Asp GTC [ENA] ¡û
>CHL1810037044 KX852427 Viridiplantae Lagerstroemia intermedia (KX852427) 29827 29751 - Asp GTC [ENA] ¡û
>CHL1810038465 KX931465 Viridiplantae Schoenolirion croceum (KX931465) 30615 30540 - Asp GTC [ENA] ¡û
>CHL1810044798 KY635883 Viridiplantae Punica granatum (KY635883) 32380 32304 - Asp GTC [ENA] ¡û
>CHL1810045758 KY817591 Viridiplantae Paeonia delavayi (KY817591) 32795 32722 - Asp GTC [ENA] ¡û
>CHL1810045786 KY817592 Viridiplantae Paeonia ludlowii (KY817592) 31240 31167 - Asp GTC [ENA] ¡û
>CHL1810048304 LC361351 Viridiplantae Arabis flagellosa Kifune (LC361351) 29859 29784 - Asp GTC [ENA] ¡û
>CHL1810052973 MF488719 Viridiplantae Paeonia rockii (MF488719) 31373 31300 - Asp GTC [ENA] ¡û
>CHL1810054705 MF926268 Viridiplantae Dalbergia hainanensis (MF926268) 31567 31642 + Asp GTC [ENA] ¡û
>CHL1810055792 MG162586 Viridiplantae Impatiens piufanensis (MG162586) 30128 30052 - Asp GTC [ENA] ¡û
>CHL1810058235 MG585274 Viridiplantae Paeonia ostii (MG585274) 31377 31304 - Asp GTC [ENA] ¡û
>CHL1810060734 MH191384 Viridiplantae Paeonia suffruticosa (MH191384) 31314 31241 - Asp GTC [ENA] ¡û
>CHL090101145 AP009369 Viridiplantae Arabis hirsuta 29878 29803 - Asp GTC [ENA] ¡û
>WENV11100143 ADWX01238173 Ant fungus garden metagenome, Atta colombica fungus garden 4249 4173 - Asp GTC [ENA] ¡û
Identical group No.363892 (1 seq.)
>WENV11100074 ADWX01058012 Ant fungus garden metagenome, Atta colombica fungus garden 191 118 - Asp GTC [ENA] ¡û
Identical group No.714698 (1 seq.)
>WENV11100177 ADWX01303330 Ant fungus garden metagenome, Atta colombica fungus garden 203 131 - Asp GTC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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