tRNA genes clustered and arranged according to each identical group

Ant fungus garden metagenome, Atta colombica fungus garden

Anticodon = TTC

HIT: 3 Group(s).
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.508860 (24 seq.)
>W1711634488 MPUA01000269 Gammaproteobacteria Escherichia coli [MPUA] 269 194 - Glu TTC [ENA] ¡û
>C171063909 CP017581 Gammaproteobacteria Pantoea stewartii subsp. stewartii DC283 [CP017581] 65680 65605 - Glu TTC - ¡û
>WENV181172456 OEIV010713908 [OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 128 203 + Glu TTC [ENA] ¢þ
>WENV181834923 OGVH01000070 [OGVH] freshwater metagenome; freshwater 4982 4907 - Glu TTC [ENA] ¢þ
>WENV181841323 OGVR01008427 [OGVR] freshwater metagenome; freshwater 613 688 + Glu TTC [ENA] ¢þ
>W141215784 AZUK01000001 Gammaproteobacteria Tolumonas lignilytica BRL6-1 [AZUK] 1975745 1975820 + Glu TTC [ENA] ¡û
>W141215792 AZUK01000001 Gammaproteobacteria Tolumonas lignilytica BRL6-1 [AZUK] 2661139 2661214 + Glu TTC [ENA] ¡û
>W141215812 AZUK01000001 Gammaproteobacteria Tolumonas lignilytica BRL6-1 [AZUK] 1520866 1520791 - Glu TTC [ENA] ¡û
>W141215820 AZUK01000001 Gammaproteobacteria Tolumonas lignilytica BRL6-1 [AZUK] 1196942 1196867 - Glu TTC [ENA] ¡û
>W09122216 ACFZ01000017 Gammaproteobacteria Tolumonas auensis DSM 9187 [ACFZ] 906 831 - Glu TTC [ENA] ¡û
>C09109542 CP000857 Gammaproteobacteria Salmonella enterica subsp. enterica serovar Paratyphi C str. RKS4594 [CP000857] 4076335 4076410 + Glu TTC [Ensembl] ¡û
>C09109549 CP000857 Gammaproteobacteria Salmonella enterica subsp. enterica serovar Paratyphi C str. RKS4594 [CP000857] 4171279 4171354 + Glu TTC [Ensembl] ¡û
>C09110499 CP001616 Gammaproteobacteria Tolumonas auensis DSM 9187 [CP001616] 207055 207130 + Glu TTC [Ensembl] ¡û
>C09110500 CP001616 Gammaproteobacteria Tolumonas auensis DSM 9187 [CP001616] 367070 367145 + Glu TTC [Ensembl] ¡û
>C09110504 CP001616 Gammaproteobacteria Tolumonas auensis DSM 9187 [CP001616] 911795 911870 + Glu TTC [Ensembl] ¡û
>C09110530 CP001616 Gammaproteobacteria Tolumonas auensis DSM 9187 [CP001616] 3255080 3255005 - Glu TTC [Ensembl] ¡û
>W1911573791 PDEG01000003 Gammaproteobacteria Pantoea agglomerans FDAARGOS_407 [PDEG] 2133083 2133008 - Glu TTC [ENA] ¡û
>C151081476 CP011365 Gammaproteobacteria Salmonella enterica subsp. enterica serovar Typhimurium FORC_015 [CP011365] 4286952 4287027 + Glu TTC [Ensembl] ¡û
>WENV11100135 ADWX01222576 Ant fungus garden metagenome, Atta colombica fungus garden 617 692 + Glu TTC [ENA] ¡û
>W1511357469 JRWI01000053 Gammaproteobacteria Pantoea stewartii M009 [JRWI] 296 221 - Glu TTC [ENA] ¡û
>W1610629027 LIHC01000012 Gammaproteobacteria Pantoea stewartii [LIHC] 791070 790995 - Glu TTC [ENA] ¡û
>W1610630848 LIIU01000024 Gammaproteobacteria Pantoea stewartii [LIIU] 364 289 - Glu TTC [ENA] ¡û
>W1710760160 LIHC01000012 Gammaproteobacteria Pantoea stewartii [LIHC] 791070 790995 - Glu TTC [ENA] ¡û
>W1710762187 LIIU01000024 Gammaproteobacteria Pantoea stewartii [LIIU] 364 289 - Glu TTC [ENA] ¡û
Identical group No.681141 (10 seq.)
>WENV181981920 OHAG01010545 [OHAG] human gut metagenome; faeces 1763 1834 + Glu TTC [ENA] ¢þ
>WENV182640201 OJLB01000675 [OJLB] metagenome; surface 1089 1160 + Glu TTC [ENA] ¢þ
>WENV182642275 OJLL01016802 [OJLL] metagenome; surface 395 324 - Glu TTC [ENA] ¢þ
>WENV183186187 OLPO01000123 [OLPO] human gut metagenome; faeces 64199 64270 + Glu TTC [ENA] ¢þ
>WENV183765207 PPYE01333790 [PPYE] human gut metagenome; stool from patient with ulcerative colitis 216 287 + Glu TTC [ENA] ¢þ
>WENV170659091 JXWR01000009 [JXWR] soil metagenome; rice field; ambient CO2 72042 72113 + Glu TTC [ENA] ¢þ
>WENV170659567 JXWR01010398 [JXWR] soil metagenome; rice field; ambient CO2 643 716 + Glu TTC [ENA] ¢þ
>WENV170659887 JXWS01024433 [JXWS] soil metagenome; rice field; elevated CO2 581 652 + Glu TTC [ENA] ¢þ
>AD01000227 NC_003071 Plant Arabidopsis thaliana 3303315 3303244 - Glu TTC [TAIR] ¡û
>WENV11100067 ADWX01049249 Ant fungus garden metagenome, Atta colombica fungus garden 113 184 + Glu TTC [ENA] ¡û
Identical group No.714692 (1 seq.)
>WENV11100132 ADWX01213308 Ant fungus garden metagenome, Atta colombica fungus garden 2660 2589 - Glu TTC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
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