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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Ascoviridae
Anticodon = TAT
HIT:
4 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.575101 (2 seq.)
>VRL0100101
DQ517337
Ascoviridae
Trichoplusia ni ascovirus 2c
162822
162750
-
Ile
TAT
[ENA]
¡û
>VRL181000603
KY434117
Ascoviridae
Trichoplusia ni ascovirus 6b (KY434117)
173582
173510
-
Ile
TAT
[ENA]
¡û
Identical group No.581834 (1 seq.)
>VRL181000453
KJ755191
Ascoviridae
Heliothis virescens ascovirus 3f (KJ755191)
43938
43866
-
Ile
TAT
[ENA]
¡û
Identical group No.601795 (2 seq.)
>VRL181000525
KU170628
Ascoviridae
Heliothis virescens ascovirus 3h (KU170628)
43426
43354
-
Ile
TAT
[ENA]
¡û
>VRL181000664
LC332918
Varidnaviria
Heliothis virescens ascovirus 3j (LC332918)
44822
44750
-
Ile
TAT
[ENA]
¡û
Identical group No.619402 (1 seq.)
>VRL181000086
JX491653
Ascoviridae
Heliothis virescens ascovirus 3g (JX491653)
46291
46219
-
Ile
TAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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