tRNA genes clustered and arranged according to each identical group

Bacterial carbon processing by generalist species in the coastal ocean. (SRP000056)

Anticodon = CTC

HIT: 2 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.459056 (136 seq.)
>WENV010131 AACY020274096 Marine microbial communities from Global Ocean Sampling (GOS) 1826 1751 - Glu CTC [ENA]
>WENV012263 AACY020334445 Marine microbial communities from Global Ocean Sampling (GOS) 1441 1516 + Glu CTC [ENA]
>WENV012334 AACY020336486 Marine microbial communities from Global Ocean Sampling (GOS) 584 509 - Glu CTC [ENA]
>WENV016486 AACY020464443 Marine microbial communities from Global Ocean Sampling (GOS) 1347 1422 + Glu CTC [ENA]
>WENV180045631 MOXS02154027 [MOXS] marine metagenome; 60 m water sample filtered on 0.2 um supor filter 69 142 + Glu CTC [ENA] ¢þ
>WENV180047645 MPLT02248063 [MPLT] marine metagenome; 70 m water sample filtered on 0.2 um supor filter 182 255 + Glu CTC [ENA] ¢þ
>WENV180102174 OAOY01000113 [OAOY] marine metagenome; Water 394 321 - Glu CTC [ENA] ¢þ
>WENV180112442 OAPP01023030 [OAPP] marine metagenome; Surface water 176 249 + Glu CTC [ENA] ¢þ
>WENV017003 AACY020474597 Marine microbial communities from Global Ocean Sampling (GOS) 40 115 + Glu CTC [ENA]
>WENV180360107 OBNT01005965 [OBNT] marine metagenome; Sea Water 430 357 - Glu CTC [ENA] ¢þ
>WENV180366349 OBOD01007498 [OBOD] marine metagenome; ENVO:00002010 650 577 - Glu CTC [ENA] ¢þ
>WENV180368811 OBOG01001202 [OBOG] marine metagenome; seawater 94 167 + Glu CTC [ENA] ¢þ
>WENV180369675 OBOH01000057 [OBOH] marine metagenome; ENVO:00002010 7079 7152 + Glu CTC [ENA] ¢þ
>WENV180379123 OBOP01003990 [OBOP] marine metagenome; water 77 4 - Glu CTC [ENA] ¢þ
>WENV180573247 OCLV01000503 [OCLV] marine metagenome; marine 1153 1226 + Glu CTC [ENA] ¢þ
>WENV180589510 OCOR01089397 [OCOR] marine metagenome; ENVO:00002042 169 242 + Glu CTC [ENA] ¢þ
>WENV180637222 OCRG01003322 [OCRG] marine metagenome; seawater 144 217 + Glu CTC [ENA] ¢þ
>WENV019895 AACY020541791 Marine microbial communities from Global Ocean Sampling (GOS) 1655 1580 - Glu CTC [ENA]
>WENV020058 AACY020546092 Marine microbial communities from Global Ocean Sampling (GOS) 1675 1750 + Glu CTC [ENA]
>WENV020138 AACY020548168 Marine microbial communities from Global Ocean Sampling (GOS) 1518 1443 - Glu CTC [ENA]
>ENV08000445 ABMD01074934 viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Christmas Atoll (Kirtimati; Northern Line Islands) 109 34 - Glu CTC [ENA] ¡û
>WENV183795304 PVBE010161493 [PVBE] marine metagenome; water 6805 6878 + Glu CTC [ENA] ¢þ
>WENV183801394 PVBE010672066 [PVBE] marine metagenome; water 471 398 - Glu CTC [ENA] ¢þ
>WENV170172069 CEOQ01090903 [CEOQ] marine metagenome genome assembly TARA_034_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1694 1769 + Glu CTC [ENA] ¢þ
>WENV170210952 CEPW01026264 [CEPW] marine metagenome genome assembly TARA_038_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 350 275 - Glu CTC [ENA] ¢þ
>WENV020760 AACY020558077 Marine microbial communities from Global Ocean Sampling (GOS) 1827 1902 + Glu CTC [ENA]
>WENV170300831 CESG01194512 [CESG] marine metagenome genome assembly TARA_078_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 390 465 + Glu CTC [ENA] ¢þ
>WENV170314028 CESN01083234 [CESN] marine metagenome genome assembly TARA_098_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 822 747 - Glu CTC [ENA] ¢þ
>WENV170332679 CESW01257315 [CESW] marine metagenome genome assembly TARA_096_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1280 1205 - Glu CTC [ENA] ¢þ
>WENV170357082 CETJ01095177 [CETJ] marine metagenome genome assembly TARA_122_MES_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 20 95 + Glu CTC [ENA] ¢þ
>WENV170423255 CEUN01362828 [CEUN] marine metagenome genome assembly TARA_124_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 847 772 - Glu CTC [ENA] ¢þ
>WENV170437641 CEUU01056106 [CEUU] marine metagenome genome assembly TARA_122_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 6222 6147 - Glu CTC [ENA] ¢þ
>WENV170446969 CEUY01183749 [CEUY] marine metagenome genome assembly TARA_123_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 20 95 + Glu CTC [ENA] ¢þ
>WENV170458542 CEVB01090575 [CEVB] marine metagenome genome assembly TARA_124_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 504 429 - Glu CTC [ENA] ¢þ
>WENV170469255 CEVF01098405 [CEVF] marine metagenome genome assembly TARA_124_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 161 236 + Glu CTC [ENA] ¢þ
>WENV020992 AACY020561281 Marine microbial communities from Global Ocean Sampling (GOS) 4545 4620 + Glu CTC [ENA]
>WENV170532411 CEWO01038214 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 128 203 + Glu CTC [ENA] ¢þ
>WENV170579169 FUFK010038186 [FUFK] metagenome; unknown 32600 32675 + Glu CTC [ENA] ¢þ
>WENV170580682 FUFK010049557 [FUFK] metagenome; unknown 9264 9339 + Glu CTC [ENA] ¢þ
>WENV170585547 FUFK010300613 [FUFK] metagenome; unknown 821 746 - Glu CTC [ENA] ¢þ
>WENV170586013 FUFK010353010 [FUFK] metagenome; unknown 753 678 - Glu CTC [ENA] ¢þ
>WENV170588722 FUFK010585085 [FUFK] metagenome; unknown 20 95 + Glu CTC [ENA] ¢þ
>WENV170589030 FUFK010610353 [FUFK] metagenome; unknown 77 152 + Glu CTC [ENA] ¢þ
>WENV170599325 FUWD010071566 [FUWD] metagenome; unknown 124 199 + Glu CTC [ENA] ¢þ
>WENV170619989 FUWD013024126 [FUWD] metagenome; unknown 173 248 + Glu CTC [ENA] ¢þ
>WENV170620009 FUWD013024444 [FUWD] metagenome; unknown 55 130 + Glu CTC [ENA] ¢þ
>WENV170625333 FUWD013196097 [FUWD] metagenome; unknown 91 166 + Glu CTC [ENA] ¢þ
>WENV170628122 FUWD013242139 [FUWD] metagenome; unknown 173 248 + Glu CTC [ENA] ¢þ
>WENV170628143 FUWD013242427 [FUWD] metagenome; unknown 55 130 + Glu CTC [ENA] ¢þ
>WENV170633572 FUWD013398797 [FUWD] metagenome; unknown 91 166 + Glu CTC [ENA] ¢þ
>WENV170727623 LULE01000829 [LULE] marine metagenome; Red Sea water column Station 192 - depth 10m 23 98 + Glu CTC [ENA] ¢þ
>WENV170727776 LULE01002157 [LULE] marine metagenome; Red Sea water column Station 192 - depth 10m 23 98 + Glu CTC [ENA] ¢þ
>WENV170730667 LULH01001247 [LULH] marine metagenome; Red Sea water column Station 169 - depth 100m 72 147 + Glu CTC [ENA] ¢þ
>WENV170731440 LULI01000334 [LULI] marine metagenome; Red Sea water column Station 169 - depth 50m 23 98 + Glu CTC [ENA] ¢þ
>WENV170731515 LULI01000651 [LULI] marine metagenome; Red Sea water column Station 169 - depth 50m 23 98 + Glu CTC [ENA] ¢þ
>WENV170732515 LULJ01000051 [LULJ] marine metagenome; Red Sea water column Station 169 - depth 25m 40228 40153 - Glu CTC [ENA] ¢þ
>WENV170734345 LULK01004126 [LULK] marine metagenome; Red Sea water column Station 169 - depth 10m 23 98 + Glu CTC [ENA] ¢þ
>WENV170734907 LULK01029664 [LULK] marine metagenome; Red Sea water column Station 169 - depth 10m 773 698 - Glu CTC [ENA] ¢þ
>WENV170736968 LULN01000302 [LULN] marine metagenome; Red Sea water column Station 149 - depth 100m 12555 12480 - Glu CTC [ENA] ¢þ
>WENV170737642 LULO01001195 [LULO] marine metagenome; Red Sea water column Station 149 - depth 50m 23 98 + Glu CTC [ENA] ¢þ
>WENV170738512 LULP01000625 [LULP] marine metagenome; Red Sea water column Station 149 - depth 25m 23 98 + Glu CTC [ENA] ¢þ
>WENV170739163 LULP01029898 [LULP] marine metagenome; Red Sea water column Station 149 - depth 25m 23 98 + Glu CTC [ENA] ¢þ
>WENV170739900 LULQ01028757 [LULQ] marine metagenome; Red Sea water column Station 149 - depth 10m 459 384 - Glu CTC [ENA] ¢þ
>WENV170742065 LULU01000534 [LULU] marine metagenome; Red Sea water column Station 108 - depth 50m 5851 5776 - Glu CTC [ENA] ¢þ
>WENV170742433 LULU01021038 [LULU] marine metagenome; Red Sea water column Station 108 - depth 50m 23 98 + Glu CTC [ENA] ¢þ
>WENV170742727 LULV01000322 [LULV] marine metagenome; Red Sea water column Station 108 - depth 25m 11654 11579 - Glu CTC [ENA] ¢þ
>WENV170743548 LULW01000414 [LULW] marine metagenome; Red Sea water column Station 108 - depth 10m 6382 6307 - Glu CTC [ENA] ¢þ
>WENV170743983 LULW01012707 [LULW] marine metagenome; Red Sea water column Station 108 - depth 10m 1052 977 - Glu CTC [ENA] ¢þ
>WENV170746569 LUMA01001475 [LUMA] marine metagenome; Red Sea water column Station 91 - depth 50m 72 147 + Glu CTC [ENA] ¢þ
>WENV170746755 LUMB01000072 [LUMB] marine metagenome; Red Sea water column Station 91 - depth 25m 12545 12470 - Glu CTC [ENA] ¢þ
>WENV170747294 LUMC01000842 [LUMC] marine metagenome; Red Sea water column Station 91 - depth 10m 3817 3742 - Glu CTC [ENA] ¢þ
>WENV170750103 LUMG01000219 [LUMG] marine metagenome; Red Sea water column Station 34 - depth 50m 2398 2473 + Glu CTC [ENA] ¢þ
>WENV170750620 LUMH01000047 [LUMH] marine metagenome; Red Sea water column Station 34 - depth 25m 23161 23086 - Glu CTC [ENA] ¢þ
>WENV170750687 LUMH01000311 [LUMH] marine metagenome; Red Sea water column Station 34 - depth 25m 23 98 + Glu CTC [ENA] ¢þ
>WENV170751216 LUMI01000075 [LUMI] marine metagenome; Red Sea water column Station 34 - depth 10m 28952 28877 - Glu CTC [ENA] ¢þ
>WENV170751462 LUMI01001289 [LUMI] marine metagenome; Red Sea water column Station 34 - depth 10m 23 98 + Glu CTC [ENA] ¢þ
>WENV170754679 LUMM01000094 [LUMM] marine metagenome; Red Sea water column Station 22 - depth 50m 23 98 + Glu CTC [ENA] ¢þ
>WENV170754731 LUMM01000358 [LUMM] marine metagenome; Red Sea water column Station 22 - depth 50m 23 98 + Glu CTC [ENA] ¢þ
>WENV170755234 LUMN01000029 [LUMN] marine metagenome; Red Sea water column Station 22 - depth 25m 25218 25143 - Glu CTC [ENA] ¢þ
>WENV170755279 LUMN01000148 [LUMN] marine metagenome; Red Sea water column Station 22 - depth 25m 23 98 + Glu CTC [ENA] ¢þ
>WENV170755904 LUMO01000454 [LUMO] marine metagenome; Red Sea water column Station 22 - depth 10m 72 147 + Glu CTC [ENA] ¢þ
>WENV170756505 LUMP01000042 [LUMP] marine metagenome; Red Sea water column Station 12 - depth 47m 49743 49668 - Glu CTC [ENA] ¢þ
>WENV170757172 LUMQ01000107 [LUMQ] marine metagenome; Red Sea water column Station 12 - depth 25m 21476 21401 - Glu CTC [ENA] ¢þ
>WENV170758332 LUMR01000750 [LUMR] marine metagenome; Red Sea water column Station 12 - depth 10m 5000 4925 - Glu CTC [ENA] ¢þ
>WENV170758469 LUMR01003426 [LUMR] marine metagenome; Red Sea water column Station 12 - depth 10m 23 98 + Glu CTC [ENA] ¢þ
>WENV170758914 LUMS01000282 [LUMS] marine metagenome; Red Sea water column Station 192 - depth 25m 11542 11467 - Glu CTC [ENA] ¢þ
>WENV170759206 LUMS01006022 [LUMS] marine metagenome; Red Sea water column Station 192 - depth 25m 23 98 + Glu CTC [ENA] ¢þ
>WENV170759747 LUMT01000347 [LUMT] marine metagenome; Red Sea water column Station 192 - depth 50m 23 98 + Glu CTC [ENA] ¢þ
>WENV170816282 MDSX01027740 [MDSX] marine metagenome; seawater 4430 4355 - Glu CTC [ENA] ¢þ
>WENV170818633 MDSX01075825 [MDSX] marine metagenome; seawater 23 98 + Glu CTC [ENA] ¢þ
>WENV170862292 MDTB01075885 [MDTB] marine metagenome; seawater 76 151 + Glu CTC [ENA] ¢þ
>WENV170886883 MDTC01229608 [MDTC] marine metagenome; seawater 3906 3831 - Glu CTC [ENA] ¢þ
>WENV170895949 MDTD01087688 [MDTD] marine metagenome; seawater 2662 2589 - Glu CTC [ENA] ¢þ
>WENV170944837 MDUO01006199 [MDUO] marine metagenome; 30 m water sample from station 6 677 752 + Glu CTC [ENA] ¢þ
>WENV022350 AACY020643297 Marine microbial communities from Global Ocean Sampling (GOS) 791 716 - Glu CTC [ENA]
>WENV025790 AACY020914209 Marine microbial communities from Global Ocean Sampling (GOS) 137 62 - Glu CTC [ENA]
>SRA1000131 SRR000288.29653 Bacterial carbon processing by generalist species in the coastal ocean. (SRP000056) 20 95 + Glu CTC [SRA]
>SRA1000469 SRR001042.188901 Line Islands Corals, viral fraction of Christmas Atoll (SRP000134) 109 34 - Glu CTC [SRA]
>W1810517991 QCCZ01000002 Actinomycetota OCS155 cluster bacterium AG-349-E07 [QCCZ] 95875 95802 - Glu CTC [ENA] ¡û
>W1810525399 QCNO01000001 Actinomycetota OCS155 cluster bacterium AG-426-D23 [QCNO] 128672 128745 + Glu CTC [ENA] ¡û
>W1810525900 QCOJ01000008 Actinomycetota OCS155 cluster bacterium AG-430-M19 [QCOJ] 8311 8384 + Glu CTC [ENA] ¡û
>WENV028137 AACY021097254 Marine microbial communities from Global Ocean Sampling (GOS) 442 517 + Glu CTC [ENA]
>WENV031660 AACY021384342 Marine microbial communities from Global Ocean Sampling (GOS) 692 767 + Glu CTC [ENA]
>WENV003137 AACY020085674 Marine microbial communities from Global Ocean Sampling (GOS) 979 1054 + Glu CTC [ENA]
>WENV003282 AACY020089756 Marine microbial communities from Global Ocean Sampling (GOS) 828 903 + Glu CTC [ENA]
>WENV037062 AACY021829121 Marine microbial communities from Global Ocean Sampling (GOS) 258 333 + Glu CTC [ENA]
>WENV039264 AACY021996036 Marine microbial communities from Global Ocean Sampling (GOS) 224 149 - Glu CTC [ENA]
>WENV004041 AACY020113458 Marine microbial communities from Global Ocean Sampling (GOS) 91 166 + Glu CTC [ENA]
>WENV041615 AACY022172546 Marine microbial communities from Global Ocean Sampling (GOS) 129 204 + Glu CTC [ENA]
>WENV041958 AACY022200641 Marine microbial communities from Global Ocean Sampling (GOS) 409 484 + Glu CTC [ENA]
>WENV042722 AACY022261092 Marine microbial communities from Global Ocean Sampling (GOS) 749 824 + Glu CTC [ENA]
>WENV045005 AACY022474274 Marine microbial communities from Global Ocean Sampling (GOS) 628 703 + Glu CTC [ENA]
>WENV046103 AACY022572850 Marine microbial communities from Global Ocean Sampling (GOS) 847 922 + Glu CTC [ENA]
>WENV046947 AACY022630685 Marine microbial communities from Global Ocean Sampling (GOS) 122 47 - Glu CTC [ENA]
>WENV047680 AACY022682081 Marine microbial communities from Global Ocean Sampling (GOS) 632 707 + Glu CTC [ENA]
>WENV004814 AACY020134586 Marine microbial communities from Global Ocean Sampling (GOS) 343 418 + Glu CTC [ENA]
>WENV051022 AACY022923859 Marine microbial communities from Global Ocean Sampling (GOS) 296 221 - Glu CTC [ENA]
>WENV057150 AACY023286512 Marine microbial communities from Global Ocean Sampling (GOS) 578 653 + Glu CTC [ENA]
>WENV063353 AACY023501115 Marine microbial communities from Global Ocean Sampling (GOS) 129 54 - Glu CTC [ENA]
>WENV063560 AACY023509171 Marine microbial communities from Global Ocean Sampling (GOS) 970 1045 + Glu CTC [ENA]
>WENV063975 AACY023524195 Marine microbial communities from Global Ocean Sampling (GOS) 1356 1431 + Glu CTC [ENA]
>WENV066815 AACY023663337 Marine microbial communities from Global Ocean Sampling (GOS) 1207 1132 - Glu CTC [ENA]
>W1610597884 LFFL01000071 Actinomycetota Actinobacteria bacterium casp-actino12 [LFFL] 11398 11473 + Glu CTC [ENA] ¡û
>W1610597888 LFFL01000081 Actinomycetota Actinobacteria bacterium casp-actino12 [LFFL] 22 97 + Glu CTC [ENA] ¡û
>WENV074638 AACY023986673 Marine microbial communities from Global Ocean Sampling (GOS) 292 367 + Glu CTC [ENA]
>WENV075118 AACY024012722 Marine microbial communities from Global Ocean Sampling (GOS) 888 813 - Glu CTC [ENA]
>WENV075756 AACY024052605 Marine microbial communities from Global Ocean Sampling (GOS) 416 341 - Glu CTC [ENA]
>WENV007582 AACY020200666 Marine microbial communities from Global Ocean Sampling (GOS) 646 571 - Glu CTC [ENA]
>WENV007727 AACY020204731 Marine microbial communities from Global Ocean Sampling (GOS) 133 208 + Glu CTC [ENA]
>WENV007872 AACY020209027 Marine microbial communities from Global Ocean Sampling (GOS) 1456 1381 - Glu CTC [ENA]
>WENV008383 AACY020224956 Marine microbial communities from Global Ocean Sampling (GOS) 1543 1618 + Glu CTC [ENA]
>WENV008627 AACY020231818 Marine microbial communities from Global Ocean Sampling (GOS) 3070 3145 + Glu CTC [ENA]
>WENV009524 AACY020256257 Marine microbial communities from Global Ocean Sampling (GOS) 382 457 + Glu CTC [ENA]
>WENV009606 AACY020258163 Marine microbial communities from Global Ocean Sampling (GOS) 116 41 - Glu CTC [ENA]
>W1710719131 LFFL01000071 Actinomycetota Actinobacteria bacterium casp-actino12 [LFFL] 11398 11473 + Glu CTC [ENA] ¡û
>W1710719135 LFFL01000081 Actinomycetota Actinobacteria bacterium casp-actino12 [LFFL] 22 97 + Glu CTC [ENA] ¡û
Identical group No.520231 (2 seq.)
>WENV183806185 PVBE011092452 [PVBE] marine metagenome; water 4054 4128 + Glu CTC [ENA] ¢þ
>SRA1000032 SRR000283.23952 Bacterial carbon processing by generalist species in the coastal ocean. (SRP000056) 26 102 + Glu CTC [SRA]
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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