tRNA genes clustered and arranged according to each identical group

Bacterial carbon processing by generalist species in the coastal ocean. (SRP000056)

Anticodon = GCA

HIT: 4 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.573343 (1 seq.)
>SRA1000009 SRR000281.8688 Bacterial carbon processing by generalist species in the coastal ocean. (SRP000056) 21 96 + Cys GCA [SRA]
Identical group No.697258 (1 seq.)
>SRA1000092 SRR000286.35649 Bacterial carbon processing by generalist species in the coastal ocean. (SRP000056) 1 75 + Cys GCA [SRA]
Identical group No.751583 (1 seq.)
>SRA1000100 SRR000287.33094 Bacterial carbon processing by generalist species in the coastal ocean. (SRP000056) 7 81 + Cys GCA [SRA]
Identical group No.783141 (77 seq.)
>WENV180103509 OAPA01058298 [OAPA] marine metagenome; ENVO:00002010 129 202 + Cys GCA [ENA] ¢þ
>WENV180104598 OAPC01039564 [OAPC] marine metagenome; na 222 295 + Cys GCA [ENA] ¢þ
>WENV180113127 OAPQ01003317 [OAPQ] marine metagenome; ENVO: 00002149 947 874 - Cys GCA [ENA] ¢þ
>WENV180113798 OAPR01025728 [OAPR] marine metagenome; seawater 210 283 + Cys GCA [ENA] ¢þ
>WENV180115806 OAPT01038776 [OAPT] marine metagenome; seawater 221 148 - Cys GCA [ENA] ¢þ
>WENV180358689 OBNQ01003716 [OBNQ] marine metagenome; ENVO 00002150 902 829 - Cys GCA [ENA] ¢þ
>WENV180360336 OBNT01061452 [OBNT] marine metagenome; Sea Water 112 185 + Cys GCA [ENA] ¢þ
>WENV180362420 OBNW01157898 [OBNW] marine metagenome; ENVO:00002010, 'SEA WATER 162 235 + Cys GCA [ENA] ¢þ
>WENV180362519 OBNX01002240 [OBNX] marine metagenome; ENVO:00002010 1206 1279 + Cys GCA [ENA] ¢þ
>WENV180363709 OBNZ01001284 [OBNZ] marine metagenome; ENVO:00002010 274 347 + Cys GCA [ENA] ¢þ
>WENV180368946 OBOG01008430 [OBOG] marine metagenome; seawater 398 471 + Cys GCA [ENA] ¢þ
>WENV180375347 OBOL01003743 [OBOL] marine metagenome; Surface water 1138 1065 - Cys GCA [ENA] ¢þ
>WENV180379805 OBOP01154560 [OBOP] marine metagenome; water 126 53 - Cys GCA [ENA] ¢þ
>WENV180380342 OBOQ01032157 [OBOQ] marine metagenome; Fridge 191 264 + Cys GCA [ENA] ¢þ
>WENV180381902 OBOS01042913 [OBOS] marine metagenome; ENVO 00002150 135 208 + Cys GCA [ENA] ¢þ
>WENV180382353 OBOT01002111 [OBOT] marine metagenome; 0 792 719 - Cys GCA [ENA] ¢þ
>WENV180383302 OBOU01030087 [OBOU] marine metagenome; ENV:00002010 215 288 + Cys GCA [ENA] ¢þ
>WENV180390160 OBPK01038440 [OBPK] marine metagenome; Sterile flask 331 404 + Cys GCA [ENA] ¢þ
>WENV180390798 OBPL01027539 [OBPL] marine metagenome; Sterivex filter 360 287 - Cys GCA [ENA] ¢þ
>WENV180391470 OBPN01002815 [OBPN] marine metagenome; seawater 1041 968 - Cys GCA [ENA] ¢þ
>WENV180392347 OBPO01047297 [OBPO] marine metagenome; seawater 315 242 - Cys GCA [ENA] ¢þ
>WENV180393374 OBPQ01027644 [OBPQ] marine metagenome; polypropylene bottle 90 163 + Cys GCA [ENA] ¢þ
>WENV180395401 OBPT01015982 [OBPT] marine metagenome; ENVO:00002010 seawater 936 863 - Cys GCA [ENA] ¢þ
>WENV180398199 OBQA01000950 [OBQA] marine metagenome; PVDF and polycarbonate filters 1348 1421 + Cys GCA [ENA] ¢þ
>WENV180398514 OBQA01043587 [OBQA] marine metagenome; PVDF and polycarbonate filters 439 512 + Cys GCA [ENA] ¢þ
>WENV180586777 OCON01001889 [OCON] marine metagenome; seawater 1814 1741 - Cys GCA [ENA] ¢þ
>WENV180587309 OCON01162975 [OCON] marine metagenome; seawater 86 13 - Cys GCA [ENA] ¢þ
>WENV180588904 OCOQ01015838 [OCOQ] marine metagenome; ENVO:00002010 65 138 + Cys GCA [ENA] ¢þ
>WENV180590892 OCOU01028833 [OCOU] marine metagenome; Water 174 101 - Cys GCA [ENA] ¢þ
>WENV180595240 OCPB01053751 [OCPB] marine metagenome; ENVO:00002149 114 187 + Cys GCA [ENA] ¢þ
>WENV180595513 OCPD01057068 [OCPD] marine metagenome; Mesotrophic water 113 40 - Cys GCA [ENA] ¢þ
>WENV180638864 OCRI01034812 [OCRI] marine metagenome; Sterile flask 196 123 - Cys GCA [ENA] ¢þ
>WENV180641704 OCRN01028431 [OCRN] marine metagenome; ENVO:00002010, 'SEA WATER 354 427 + Cys GCA [ENA] ¢þ
>WENV182552010 OJCJ01002960 [OJCJ] seawater metagenome; Sea water 1091 1164 + Cys GCA [ENA] ¢þ
>WENV182553602 OJCR01014109 [OJCR] seawater metagenome; Sea water 644 571 - Cys GCA [ENA] ¢þ
>WENV182556145 OJDG01000628 [OJDG] seawater metagenome; Sea water 2111 2184 + Cys GCA [ENA] ¢þ
>WENV182579552 OJGS01021810 [OJGS] seawater metagenome; Sea water 163 90 - Cys GCA [ENA] ¢þ
>WENV182582862 OJHC01001038 [OJHC] seawater metagenome; Sea water 430 357 - Cys GCA [ENA] ¢þ
>WENV183700028 OZSS01086482 [OZSS] metagenome; Seawater sample 440 513 + Cys GCA [ENA] ¢þ
>WENV170274914 CERM01051601 [CERM] marine metagenome genome assembly TARA_067_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 195 268 + Cys GCA [ENA] ¢þ
>WENV170298378 CESF01105279 [CESF] marine metagenome genome assembly TARA_093_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 499 572 + Cys GCA [ENA] ¢þ
>WENV170305941 CESI01292707 [CESI] marine metagenome genome assembly TARA_082_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 581 654 + Cys GCA [ENA] ¢þ
>WENV170473988 CEVH01090027 [CEVH] marine metagenome genome assembly TARA_141_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 197 270 + Cys GCA [ENA] ¢þ
>WENV170790410 MDSV01065629 [MDSV] marine metagenome; seawater 2997 2924 - Cys GCA [ENA] ¢þ
>WENV170790823 MDSV01072390 [MDSV] marine metagenome; seawater 985 1058 + Cys GCA [ENA] ¢þ
>WENV170791512 MDSV01084532 [MDSV] marine metagenome; seawater 6961 6888 - Cys GCA [ENA] ¢þ
>WENV170833218 MDSZ01076021 [MDSZ] marine metagenome; seawater 138 65 - Cys GCA [ENA] ¢þ
>WENV170835737 MDSZ01119440 [MDSZ] marine metagenome; seawater 2580 2653 + Cys GCA [ENA] ¢þ
>WENV170836082 MDSZ01124797 [MDSZ] marine metagenome; seawater 2995 3068 + Cys GCA [ENA] ¢þ
>WENV170857709 MDTB01012321 [MDTB] marine metagenome; seawater 7808 7735 - Cys GCA [ENA] ¢þ
>WENV170870248 MDTB01188940 [MDTB] marine metagenome; seawater 747 820 + Cys GCA [ENA] ¢þ
>WENV170894483 MDTD01066236 [MDTD] marine metagenome; seawater 79 6 - Cys GCA [ENA] ¢þ
>WENV170896610 MDTD01098292 [MDTD] marine metagenome; seawater 3724 3651 - Cys GCA [ENA] ¢þ
>WENV170933570 MDTG01223089 [MDTG] marine metagenome; seawater 80 7 - Cys GCA [ENA] ¢þ
>WENV170935735 MDTG01262530 [MDTG] marine metagenome; seawater 341 268 - Cys GCA [ENA] ¢þ
>WENV170943453 MDTG01397487 [MDTG] marine metagenome; seawater 2826 2753 - Cys GCA [ENA] ¢þ
>WENV023349 AACY020718849 Marine microbial communities from Global Ocean Sampling (GOS) 124 49 - Cys GCA [ENA]
>SRA1000091 SRR000286.30070 Bacterial carbon processing by generalist species in the coastal ocean. (SRP000056) 4 77 + Cys GCA [SRA]
>WENV036422 AACY021778344 Marine microbial communities from Global Ocean Sampling (GOS) 713 786 + Cys GCA [ENA]
>C10110218 CP001751 Alphaproteobacteria Candidatus Puniceispirillum marinum IMCC1322 [CP001751] 464356 464429 + Cys GCA [Ensembl] ¡û
>WENV038415 AACY021932055 Marine microbial communities from Global Ocean Sampling (GOS) 464 391 - Cys GCA [ENA]
>WENV043617 AACY022341834 Marine microbial communities from Global Ocean Sampling (GOS) 177 252 + Cys GCA [ENA]
>WENV044744 AACY022449498 Marine microbial communities from Global Ocean Sampling (GOS) 365 440 + Cys GCA [ENA]
>WENV044822 AACY022456762 Marine microbial communities from Global Ocean Sampling (GOS) 594 521 - Cys GCA [ENA]
>WENV056200 AACY023251064 Marine microbial communities from Global Ocean Sampling (GOS) 445 372 - Cys GCA [ENA]
>WENV059398 AACY023364819 Marine microbial communities from Global Ocean Sampling (GOS) 887 812 - Cys GCA [ENA]
>WENV063889 AACY023521444 Marine microbial communities from Global Ocean Sampling (GOS) 467 540 + Cys GCA [ENA]
>WENV064835 AACY023560937 Marine microbial communities from Global Ocean Sampling (GOS) 533 458 - Cys GCA [ENA]
>WENV066987 AACY023670972 Marine microbial communities from Global Ocean Sampling (GOS) 839 766 - Cys GCA [ENA]
>WENV072584 AACY023889926 Marine microbial communities from Global Ocean Sampling (GOS) 9 82 + Cys GCA [ENA]
>WENV073299 AACY023922150 Marine microbial communities from Global Ocean Sampling (GOS) 480 553 + Cys GCA [ENA]
>WENV073445 AACY023927795 Marine microbial communities from Global Ocean Sampling (GOS) 1728 1655 - Cys GCA [ENA]
>W1610597440 LFEV01000013 Alphaproteobacteria Alphaproteobacteria bacterium casp-alpha10 [LFEV] 17256 17183 - Cys GCA [ENA] ¡û
>W1610597462 LFEV01000055 Alphaproteobacteria Alphaproteobacteria bacterium casp-alpha10 [LFEV] 10688 10615 - Cys GCA [ENA] ¡û
>WENV074367 AACY023972053 Marine microbial communities from Global Ocean Sampling (GOS) 909 984 + Cys GCA [ENA]
>W1710718764 LFEV01000013 Alphaproteobacteria Alphaproteobacteria bacterium casp-alpha10 [LFEV] 17256 17183 - Cys GCA [ENA] ¡û
>W1710718786 LFEV01000055 Alphaproteobacteria Alphaproteobacteria bacterium casp-alpha10 [LFEV] 10688 10615 - Cys GCA [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK