tRNA genes clustered and arranged according to each identical group

Bacterial carbon processing by generalist species in the coastal ocean. (SRP000056)

Anticodon = TTG

HIT: 4 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.562805 (1 seq.)
>SRA1000029 SRR000283.8798 Bacterial carbon processing by generalist species in the coastal ocean. (SRP000056) 23 98 + Gln TTG [SRA]
Identical group No.662435 (84 seq.)
>WENV180101085 OAOU01000301 [OAOU] marine metagenome; ENVO:00002010 SEAWATER 3031 3105 + Gln TTG [ENA] ¢þ
>WENV180103130 OAPA01002748 [OAPA] marine metagenome; ENVO:00002010 817 891 + Gln TTG [ENA] ¢þ
>WENV180110010 OAPL01034679 [OAPL] marine metagenome; ENVO:00002010 for 'seawater 200 128 - Gln TTG [ENA] ¢þ
>WENV180114642 OAPS01027787 [OAPS] marine metagenome; sea water 290 364 + Gln TTG [ENA] ¢þ
>WENV180209076 OBAK01013090 [OBAK] marine metagenome; ENVO.00002150 385 457 + Gln TTG [ENA] ¢þ
>WENV180210166 OBAL01133610 [OBAL] marine metagenome; ENVO:00002019, 'BRACKISH WATER 194 268 + Gln TTG [ENA] ¢þ
>WENV180359599 OBNS01004367 [OBNS] marine metagenome; Seawater 332 258 - Gln TTG [ENA] ¢þ
>WENV180361042 OBNU01093740 [OBNU] marine metagenome; ENVO:00000021 'freshwater lake 193 119 - Gln TTG [ENA] ¢þ
>WENV180361849 OBNW01004639 [OBNW] marine metagenome; ENVO:00002010, 'SEA WATER 481 555 + Gln TTG [ENA] ¢þ
>WENV180365046 OBOB01004556 [OBOB] marine metagenome; ENVO:00002019, 'BRACKISH WATER 680 606 - Gln TTG [ENA] ¢þ
>WENV180376747 OBOM01070432 [OBOM] marine metagenome; Seawater 369 443 + Gln TTG [ENA] ¢þ
>WENV180391678 OBPN01019266 [OBPN] marine metagenome; seawater 552 624 + Gln TTG [ENA] ¢þ
>WENV180392914 OBPP01025307 [OBPP] marine metagenome; ENVO:00002042 382 310 - Gln TTG [ENA] ¢þ
>WENV180393915 OBPR01023232 [OBPR] marine metagenome; ENVO:00002042 274 200 - Gln TTG [ENA] ¢þ
>WENV180394402 OBPS01003838 [OBPS] marine metagenome; ENVO:00002010 seawater 1660 1586 - Gln TTG [ENA] ¢þ
>WENV180650528 OCSY01056061 [OCSY] marine metagenome; 30 L Plastic container 263 337 + Gln TTG [ENA] ¢þ
>WENV181315609 OFJP01010227 [OFJP] marine metagenome; seawater 476 404 - Gln TTG [ENA] ¢þ
>WENV182540407 OJAJ01000311 [OJAJ] seawater metagenome; Sea water 2578 2650 + Gln TTG [ENA] ¢þ
>WENV182540828 OJAQ01000017 [OJAQ] seawater metagenome; Sea water 15389 15317 - Gln TTG [ENA] ¢þ
>WENV182542998 OJAZ01013810 [OJAZ] seawater metagenome; Sea water 319 391 + Gln TTG [ENA] ¢þ
>WENV182544230 OJBF01000005 [OJBF] seawater metagenome; Sea water 7332 7260 - Gln TTG [ENA] ¢þ
>WENV182544468 OJBG01003968 [OJBG] seawater metagenome; Sea water 357 429 + Gln TTG [ENA] ¢þ
>WENV182544933 OJBL01000260 [OJBL] seawater metagenome; Sea water 2577 2505 - Gln TTG [ENA] ¢þ
>WENV182548581 OJBW01004310 [OJBW] seawater metagenome; Sea water 370 442 + Gln TTG [ENA] ¢þ
>WENV182550142 OJBZ01005299 [OJBZ] seawater metagenome; Sea water 403 475 + Gln TTG [ENA] ¢þ
>WENV182552655 OJCN01001067 [OJCN] seawater metagenome; Sea water 903 831 - Gln TTG [ENA] ¢þ
>WENV182553211 OJCR01000551 [OJCR] seawater metagenome; Sea water 10663 10735 + Gln TTG [ENA] ¢þ
>WENV182554056 OJCT01000145 [OJCT] seawater metagenome; Sea water 2140 2212 + Gln TTG [ENA] ¢þ
>WENV182557017 OJDI01000324 [OJDI] seawater metagenome; Sea water 1351 1423 + Gln TTG [ENA] ¢þ
>WENV182561579 OJDX01000008 [OJDX] seawater metagenome; Sea water 30944 30872 - Gln TTG [ENA] ¢þ
>WENV182561890 OJDY01000001 [OJDY] seawater metagenome; Sea water 387522 387450 - Gln TTG [ENA] ¢þ
>WENV182562668 OJEA01000027 [OJEA] seawater metagenome; Sea water 11795 11723 - Gln TTG [ENA] ¢þ
>WENV182563021 OJEB01000002 [OJEB] seawater metagenome; Sea water 19125 19197 + Gln TTG [ENA] ¢þ
>WENV182564027 OJEE01000005 [OJEE] seawater metagenome; Sea water 22267 22339 + Gln TTG [ENA] ¢þ
>WENV182568975 OJEY01000001 [OJEY] seawater metagenome; Sea water 37551 37623 + Gln TTG [ENA] ¢þ
>WENV182569798 OJFB01000599 [OJFB] seawater metagenome; Sea water 212 140 - Gln TTG [ENA] ¢þ
>WENV182571065 OJFG01000217 [OJFG] seawater metagenome; Sea water 15043 15115 + Gln TTG [ENA] ¢þ
>WENV182572544 OJFL01020411 [OJFL] seawater metagenome; Sea water 703 631 - Gln TTG [ENA] ¢þ
>WENV182574524 OJFS01000005 [OJFS] seawater metagenome; Sea water 22649 22721 + Gln TTG [ENA] ¢þ
>WENV182576674 OJFY01001279 [OJFY] seawater metagenome; Sea water 2583 2511 - Gln TTG [ENA] ¢þ
>WENV182577913 OJGM01000008 [OJGM] seawater metagenome; Sea water 125 53 - Gln TTG [ENA] ¢þ
>WENV182580911 OJGW01027174 [OJGW] seawater metagenome; Sea water 194 122 - Gln TTG [ENA] ¢þ
>WENV182582097 OJHA01000013 [OJHA] seawater metagenome; Sea water 29151 29223 + Gln TTG [ENA] ¢þ
>WENV182582370 OJHB01000002 [OJHB] seawater metagenome; Sea water 6996 7068 + Gln TTG [ENA] ¢þ
>WENV182583072 OJHD01000070 [OJHD] seawater metagenome; Sea water 7418 7346 - Gln TTG [ENA] ¢þ
>WENV182584812 OJHG01013095 [OJHG] seawater metagenome; Sea water 601 673 + Gln TTG [ENA] ¢þ
>WENV182586830 OJHK01006660 [OJHK] seawater metagenome; Sea water 2174 2246 + Gln TTG [ENA] ¢þ
>WENV182587545 OJHN01000021 [OJHN] seawater metagenome; Sea water 8916 8844 - Gln TTG [ENA] ¢þ
>WENV182592311 OJIR01000004 [OJIR] seawater metagenome; Sea water 51393 51321 - Gln TTG [ENA] ¢þ
>WENV183053701 OLGP01003903 [OLGP] seawater metagenome; Sea water 359 431 + Gln TTG [ENA] ¢þ
>WENV183054501 OLGU01000004 [OLGU] seawater metagenome; Sea water 21739 21811 + Gln TTG [ENA] ¢þ
>WENV183059227 OLHU01000023 [OLHU] seawater metagenome; Sea water 36357 36429 + Gln TTG [ENA] ¢þ
>WENV183060156 OLHX01000001 [OLHX] seawater metagenome; Sea water 37965 37893 - Gln TTG [ENA] ¢þ
>WENV170135752 CENU01325393 [CENU] marine metagenome genome assembly TARA_025_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 79 153 + Gln TTG [ENA] ¢þ
>WENV170570767 FLOH01000022 [FLOH] marine metagenome; water 59854 59928 + Gln TTG [ENA] ¢þ
>WENV170571397 FLOH01000149 [FLOH] marine metagenome; water 13305 13377 + Gln TTG [ENA] ¢þ
>WENV170626754 FUWD013229281 [FUWD] metagenome; unknown 17761 17835 + Gln TTG [ENA] ¢þ
>WENV170627180 FUWD013231816 [FUWD] metagenome; unknown 12622 12696 + Gln TTG [ENA] ¢þ
>WENV170627240 FUWD013232376 [FUWD] metagenome; unknown 21693 21621 - Gln TTG [ENA] ¢þ
>WENV170631789 FUWD013365724 [FUWD] metagenome; unknown 54635 54709 + Gln TTG [ENA] ¢þ
>WENV170632220 FUWD013379536 [FUWD] metagenome; unknown 12622 12696 + Gln TTG [ENA] ¢þ
>WENV170950424 MEHZ011496092 [MEHZ] marine metagenome; marine surface water 3804 3876 + Gln TTG [ENA] ¢þ
>C181143720 CP026923 Actinomycetota Pontimonas salivibrio CL-TW6 [CP026923] 465312 465386 + Gln TTG - ¡û
>W141750776 JNSD01000006 Actinomycetota actinobacterium acMicro-4 [JNSD] 10896 10822 - Gln TTG [ENA] ¡û
>SRA1000111 SRR000287.44513 Bacterial carbon processing by generalist species in the coastal ocean. (SRP000056) 10 84 + Gln TTG [SRA]
>SRA1000112 SRR000287.50045 Bacterial carbon processing by generalist species in the coastal ocean. (SRP000056) 10 84 + Gln TTG [SRA]
>WENV027642 AACY021060647 Marine microbial communities from Global Ocean Sampling (GOS) 169 245 + Gln TTG [ENA]
>SRA1017135 SRR035082.86845 454 Sequencing (SRP001803) 408 336 - Gln TTG [SRA]
>SRA1023532 SRR035084.117648 454 Sequencing (SRP001805) 330 256 - Gln TTG [SRA]
>SRA1024970 SRR035084.450649 454 Sequencing (SRP001805) 278 206 - Gln TTG [SRA]
>SRA1027233 SRR035086.87323 454 Sequencing (SRP001807) 379 453 + Gln TTG [SRA]
>SRA1029798 SRR035087.182740 454 Sequencing (SRP001808) 129 203 + Gln TTG [SRA]
>SRA1045082 SRR035092.407165 454 Sequencing (SRP001813) 205 279 + Gln TTG [SRA]
>SRA1051668 SRR035098.55288 454 Sequencing (SRP001819) 32 106 + Gln TTG [SRA]
>SRA1052192 SRR035098.158298 454 Sequencing (SRP001819) 157 231 + Gln TTG [SRA]
>SRA1052665 SRR035098.248540 454 Sequencing (SRP001819) 182 108 - Gln TTG [SRA]
>SRA1052743 SRR035098.265212 454 Sequencing (SRP001819) 151 225 + Gln TTG [SRA]
>SRA1053063 SRR035098.328562 454 Sequencing (SRP001819) 128 54 - Gln TTG [SRA]
>SRA1053443 SRR035098.406336 454 Sequencing (SRP001819) 300 228 - Gln TTG [SRA]
>WENV047295 AACY022654579 Marine microbial communities from Global Ocean Sampling (GOS) 540 464 - Gln TTG [ENA]
>W1610597645 LFFC01000012 Actinomycetota Actinobacteria bacterium casp-actino3 [LFFC] 1558 1632 + Gln TTG [ENA] ¡û
>W1610625660 LIAY01000001 Actinomycetota Microbacteriaceae bacterium BACL25 MAG-120322-bin65 [LIAY] 10789 10863 + Gln TTG [ENA] ¡û
>W1710718892 LFFC01000012 Actinomycetota Actinobacteria bacterium casp-actino3 [LFFC] 1558 1632 + Gln TTG [ENA] ¡û
>W1710756787 LIAY01000001 Actinomycetota Microbacteriaceae bacterium BACL25 MAG-120322-bin65 [LIAY] 10789 10863 + Gln TTG [ENA] ¡û
Identical group No.751584 (1 seq.)
>SRA1000104 SRR000287.36089 Bacterial carbon processing by generalist species in the coastal ocean. (SRP000056) 11 85 + Gln TTG [SRA]
Identical group No.799255 (1 seq.)
>SRA1000087 SRR000286.23080 Bacterial carbon processing by generalist species in the coastal ocean. (SRP000056) 90 17 - Gln TTG [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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