tRNA genes clustered and arranged according to each identical group

Bacterial carbon processing by generalist species in the coastal ocean. (SRP000056)

Anticodon = CGG

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.272240 (152 seq.)
>W1710811771 LKIU01000002 Actinomycetota Arthrobacter sp. Edens01 [LKIU] 123313 123237 - Pro CGG [ENA]
>W1710860319 LMCU01000001 Actinomycetota Leifsonia sp. Root112D2 [LMCU] 245822 245896 + Pro CGG [ENA]
>W1710864349 LMFU01000002 Actinomycetota Agromyces sp. Root1464 [LMFU] 1115294 1115370 + Pro CGG [ENA]
>W1710867924 LMIR01000002 Actinomycetota Agromyces sp. Root81 [LMIR] 275662 275738 + Pro CGG [ENA]
>W1710870611 LMKQ01000001 Actinomycetota Agromyces sp. Leaf222 [LMKQ] 1286768 1286694 - Pro CGG [ENA]
>W1710872175 LMLU01000001 Actinomycetota Arthrobacter sp. Leaf234 [LMLU] 1000193 1000117 - Pro CGG [ENA]
>W1710872932 LMMJ01000009 Actinomycetota Curtobacterium sp. Leaf261 [LMMJ] 222368 222442 + Pro CGG [ENA]
>W1710878876 LMRH01000003 Actinomycetota Sanguibacter sp. Leaf3 [LMRH] 651197 651121 - Pro CGG [ENA]
>W1710996497 LQBM01000001 Actinomycetota Nesterenkonia jeotgali [LQBM] 682015 681939 - Pro CGG [ENA]
>W1711074669 LSJT01000011 Actinomycetota Dermacoccus sp. CCH2-D9 [LSJT] 11347 11271 - Pro CGG [ENA]
>W1711135018 LUYM01000003 Actinomycetota Actinomycetales bacterium Actino_02 [LUYM] 28257 28181 - Pro CGG [ENA]
>W1711185766 LWNR01000001 Actinomycetota Arthrobacter sp. HMSC08H08 [LWNR] 145871 145797 - Pro CGG [ENA]
>W1711664257 MQVT01000017 Actinomycetota Dermacoccus nishinomiyaensis [MQVT] 11534 11458 - Pro CGG [ENA]
>W1711664316 MQVU01000016 Actinomycetota Dermacoccus nishinomiyaensis [MQVU] 38873 38949 + Pro CGG [ENA]
>W1712049540 NFSD01000031 Actinomycetota Arthrobacter agilis [NFSD] 183955 184031 + Pro CGG [ENA]
>W131066810 ANPE02000100 Actinomycetota Arthrobacter crystallopoietes BAB-32 [ANPE] 1536 1462 - Pro CGG [ENA]
>W131191144 ASHR01000014 Actinomycetota Agrococcus pavilionensis RW1 [ASHR] 55933 55859 - Pro CGG [ENA]
>W131217847 ATXE01000001 Actinomycetota Aestuariimicrobium kwangyangense DSM 21549 [ATXE] 5523 5599 + Pro CGG [ENA]
>W131217934 ATXF01000011 Actinomycetota Agromyces italicus DSM 16388 [ATXF] 73518 73442 - Pro CGG [ENA]
>W131217969 ATXG01000013 Actinomycetota Agromyces subbeticus DSM 16689 [ATXG] 72596 72520 - Pro CGG [ENA]
>W131227577 AUFG01000019 Actinomycetota Arsenicicoccus bolidensis DSM 15745 [AUFG] 56805 56729 - Pro CGG [ENA]
>W131234867 AULD01000005 Actinomycetota Agrococcus lahaulensis DSM 17612 [AULD] 17481 17555 + Pro CGG [ENA]
>W131252017 CBLL010000093 Actinomycetota Nesterenkonia massiliensis NP1 [CBLL] 180 256 + Pro CGG [ENA]
>WENV180103365 OAPA01021532 [OAPA] marine metagenome; ENVO:00002010 334 260 - Pro CGG [ENA]
>WENV180209002 OBAK01003898 [OBAK] marine metagenome; ENVO.00002150 709 633 - Pro CGG [ENA]
>WENV180361870 OBNW01005792 [OBNW] marine metagenome; ENVO:00002010, 'SEA WATER 501 575 + Pro CGG [ENA]
>WENV180368707 OBOF01211370 [OBOF] marine metagenome; ENVO:00002010 140 64 - Pro CGG [ENA]
>WENV180376491 OBOM01015063 [OBOM] marine metagenome; Seawater 138 64 - Pro CGG [ENA]
>WENV180393901 OBPR01021429 [OBPR] marine metagenome; ENVO:00002042 420 344 - Pro CGG [ENA]
>WENV181122492 OEFM01025856 [OEFM] marine metagenome; ENVO:00000569 for seawater 299 373 + Pro CGG [ENA]
>WENV181395520 OFSA01001503 [OFSA] freshwater metagenome; Freshwater Lake 379 455 + Pro CGG [ENA]
>W141213347 AZRX01000111 Actinomycetota Arthrobacter sp. H14 [AZRX] 2587 2511 - Pro CGG [ENA]
>WENV183722346 PDWJ01121329 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 24 98 + Pro CGG [ENA]
>W141426473 JEMO01000001 Actinomycetota Nesterenkonia sp. AN1 [JEMO] 116 192 + Pro CGG [ENA]
>WENV170552199 CXWJ01045418 [CXWJ] wastewater metagenome; activated sludge 792 866 + Pro CGG [ENA]
>WENV170720557 LSQX01157516 [LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition 347 271 - Pro CGG [ENA]
>WENV170784039 MCHG01000003 [MCHG] permafrost metagenome; enrichment culture inoculated with soil; incubated with H2/CO2 at 20 degrees celsius and 222564 222640 + Pro CGG [ENA]
>C181033489 CP018863 Actinomycetota Arthrobacter crystallopoietes DSM 20117 [CP018863] 572361 572435 + Pro CGG -
>C181169635 CP028913 Actinomycetota Agromyces badenianii MF30-A [CP028913] 2182004 2182079 + Pro CGG -
>C181229772 LT985188 Actinomycetota Micropruina glycogenica [LT985188] 3384624 3384548 - Pro CGG -
>C191004148 AP018697 Actinomycetota Arthrobacter sp. MN05-02 [AP018697] 2951472 2951548 + Pro CGG -
>C191183350 CP040872 Actinomycetota Agromyces laixinhei HY052 [CP040872] 1440053 1439978 - Pro CGG -
>C191193427 LR131272 Actinomycetota Arthrobacter agilis NCTC2676_1 [LR131272] 2797930 2798005 + Pro CGG -
>W09109050 ABTU01000019 Actinomycetota Geodermatophilus obscurus DSM 43160 [ABTU] 88541 88615 + Pro CGG [ENA]
>W141563787 JIAG01000001 Actinomycetota Haematomicrobium sanguinis DSM 21259 [JIAG] 324935 325009 + Pro CGG [ENA]
>W141731271 JNIY01000004 Actinomycetota Paraoerskovia marina DSM 21750 [JNIY] 151601 151525 - Pro CGG [ENA]
>W141769432 JOFV01000001 Actinomycetota Oerskovia turbata [JOFV] 87033 86957 - Pro CGG [ENA]
>W1910231918 FPEG01000003 Actinomycetota Agrococcus sp. Marseille-P2731 [FPEG] 350848 350922 + Pro CGG [ENA]
>W1910373894 FUHU01000044 Actinomycetota Agrococcus casei LMG 22410 [FUHU] 116563 116639 + Pro CGG [ENA]
>W1910373979 FUHW01000034 Actinomycetota Arthrobacter rhombi B Ar 00.02 [FUHW] 2126 2202 + Pro CGG [ENA]
>W1910377737 FUKQ01000043 Actinomycetota Luteococcus japonicus LSP_Lj1 [FUKQ] 23597 23673 + Pro CGG [ENA]
>W1910377793 FUKR01000046 Actinomycetota Mycetocola reblochoni REB411 [FUKR] 24120 24044 - Pro CGG [ENA]
>W1910548515 FZOO01000006 Actinomycetota Geodermatophilus pulveris DSM 46839 [FZOO] 64552 64478 - Pro CGG [ENA]
>W1911076582 NMVQ01000001 Actinomycetota Enemella dayhoffiae NML 130396 [NMVQ] 3719 3793 + Pro CGG [ENA]
>W1911203421 NRGU01000020 Actinomycetota Glutamicibacter sp. BW78 [NRGU] 86995 86919 - Pro CGG [ENA]
>W1911385142 NVPT01000030 Actinomycetota Geodermatophilus chilensis B12 [NVPT] 2849 2775 - Pro CGG [ENA]
>W1911492098 OBDO01000005 Actinomycetota Geodermatophilus sabuli DSM 46844 [OBDO] 100814 100738 - Pro CGG [ENA]
>W1911676405 QGTB01000003 Actinomycetota Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133 [QGTB] 209674 209750 + Pro CGG [ENA]
>W1911681890 QKLA01000006 Actinomycetota Curtobacterium sp. MCPF17_050 [QKLA] 184566 184640 + Pro CGG [ENA]
>W1911681944 QKLB01000004 Actinomycetota Curtobacterium sp. MCPF17_046 [QKLB] 103045 102971 - Pro CGG [ENA]
>W1911682030 QKLD01000002 Actinomycetota Curtobacterium sp. MCPF17_015 [QKLD] 271954 271880 - Pro CGG [ENA]
>W1911682080 QKLI01000002 Actinomycetota Curtobacterium sp. MCBD17_030 [QKLI] 181428 181354 - Pro CGG [ENA]
>W1911682125 QKLJ01000003 Actinomycetota Curtobacterium sp. MCBD17_023 [QKLJ] 179373 179447 + Pro CGG [ENA]
>W1911682167 QKLK01000003 Actinomycetota Curtobacterium sp. MCBD17_029 [QKLK] 178423 178497 + Pro CGG [ENA]
>W1911685031 QKSD01000009 Actinomycetota Curtobacterium sp. MCPF17_052 [QKSD] 106804 106878 + Pro CGG [ENA]
>W1911685116 QKSF01000004 Actinomycetota Curtobacterium sp. MCPF17_047 [QKSF] 139982 140056 + Pro CGG [ENA]
>W1911685178 QKSG01000006 Actinomycetota Curtobacterium sp. MCPF17_031 [QKSG] 82150 82076 - Pro CGG [ENA]
>W1911685352 QKSK01000005 Actinomycetota Curtobacterium sp. MCPF17_011 [QKSK] 138101 138175 + Pro CGG [ENA]
>W1911685396 QKSL01000007 Actinomycetota Curtobacterium sp. MCPF17_001 [QKSL] 87509 87583 + Pro CGG [ENA]
>W1911685422 QKTK01000001 Actinomycetota Curtobacterium sp. MCBD17_008 [QKTK] 101958 102032 + Pro CGG [ENA]
>W1911685638 QKTO01000003 Actinomycetota Curtobacterium sp. MCBD17_032 [QKTO] 170236 170310 + Pro CGG [ENA]
>W1911685821 QKTS01000003 Actinomycetota Curtobacterium sp. MCBD17_021 [QKTS] 173305 173379 + Pro CGG [ENA]
>SRA1000008 SRR000281.7942 Bacterial carbon processing by generalist species in the coastal ocean. (SRP000056) 79 3 - Pro CGG [SRA]
>SRA1000010 SRR000281.10027 Bacterial carbon processing by generalist species in the coastal ocean. (SRP000056) 79 3 - Pro CGG [SRA]
>W1911719730 QQXL01000009 Actinomycetota Galactobacter caseinivorans JZ R-183 [QQXL] 1070 1146 + Pro CGG [ENA]
>W1911752169 QWLD01000004 Actinomycetota Nesterenkonia muleiensis RB2 [QWLD] 204 280 + Pro CGG [ENA]
>W1911752320 QWLM01000025 Actinomycetota Dermacoccus abyssi MT1.1 [QWLM] 18251 18325 + Pro CGG [ENA]
>W1810057998 PDJC01000001 Actinomycetota Propionicimonas paludicola DSM 15597 [PDJC] 2461335 2461411 + Pro CGG [ENA]
>W1810058180 PDJG01000001 Actinomycetota Sanguibacter antarcticus DSM 18966 [PDJG] 2432397 2432473 + Pro CGG [ENA]
>W1810090087 PGFE01000003 Actinomycetota Sediminihabitans luteus DSM 25478 [PGFE] 218165 218241 + Pro CGG [ENA]
>W1810167282 PJIJ01000001 Actinomycetota Arthrobacter sp. ZGTC212 [PJIJ] 629131 629055 - Pro CGG [ENA]
>W1810167616 PJIQ01000001 Actinomycetota Arthrobacter sp. B1805 [PJIQ] 416521 416445 - Pro CGG [ENA]
>W1810167685 PJIR01000005 Actinomycetota Arthrobacter sp. B0490 [PJIR] 21925 21849 - Pro CGG [ENA]
>W1810167710 PJIS01000001 Actinomycetota Arthrobacter sp. 9E06 [PJIS] 757310 757386 + Pro CGG [ENA]
>W1810167761 PJIT01000001 Actinomycetota Arthrobacter sp. 9E18 [PJIT] 757310 757386 + Pro CGG [ENA]
>W1810167812 PJIU01000001 Actinomycetota Arthrobacter sp. 9E16 [PJIU] 757310 757386 + Pro CGG [ENA]
>W1810167959 PJIX01000001 Actinomycetota Arthrobacter sp. 08Y14 [PJIX] 742932 743008 + Pro CGG [ENA]
>W1810240438 PPTH01000018 Actinomycetota Arthrobacter ruber MDB1-42 [PPTH] 586287 586363 + Pro CGG [ENA]
>W1810271438 PRKX01000027 Actinomycetota Arthrobacter agilis CGMCC 1.15723 [PRKX] 183963 184038 + Pro CGG [ENA]
>W1810365276 PVTY01000014 Actinomycetota Nesterenkonia sandarakina CG 35 [PVTY] 90780 90704 - Pro CGG [ENA]
>W1810568974 QEFA01000001 Actinomycetota Agromyces badenianii 845 [QEFA] 117211 117286 + Pro CGG [ENA]
>W1810675533 QKLF01000004 Actinomycetota Curtobacterium sp. MCJR17_055 [QKLF] 272125 272051 - Pro CGG [ENA]
>W1810675559 QKLG01000003 Actinomycetota Curtobacterium sp. MCJR17_043 [QKLG] 174715 174789 + Pro CGG [ENA]
>W1810681219 QKSR01000006 Actinomycetota Curtobacterium sp. MCSS17_015 [QKSR] 38445 38371 - Pro CGG [ENA]
>W1810681989 QKTI01000003 Actinomycetota Curtobacterium sp. MCLR17_032 [QKTI] 139549 139623 + Pro CGG [ENA]
>W1810733378 QOHF01000012 Actinomycetota Geodermatophilus sp. TF02-6 [QOHF] 86875 86801 - Pro CGG [ENA]
>W1810860844 QTTL01000001 Actinomycetota Agromyces sp. OV429 [QTTL] 1429980 1429906 - Pro CGG [ENA]
>W1810886033 QUNT01000001 Actinomycetota Agromyces sp. OV568 [QUNT] 164392 164317 - Pro CGG [ENA]
>W1810914993 QVQH01000004 Actinomycetota Geodermatophilus sp. LHW52908 [QVQH] 157752 157828 + Pro CGG [ENA]
>SRA1015560 SRR023846.111623 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 23 99 + Pro CGG [SRA]
>C151039201 CP008889 Actinomycetota Dermacoccus nishinomiyaensis M25 [CP008889] 2749366 2749290 - Pro CGG [Ensembl]
>SRA1025461 SRR035085.14763 454 Sequencing (SRP001806) 309 385 + Pro CGG [SRA]
>SRA1025489 SRR035085.23799 454 Sequencing (SRP001806) 311 387 + Pro CGG [SRA]
>C151090443 CP012070 Actinomycetota Arsenicicoccus sp. oral taxon 190 F0371 [CP012070] 544734 544810 + Pro CGG -
>W10100690 ABUN01000021 Actinomycetota Sanguibacter keddieii DSM 10542 [ABUN] 63819 63895 + Pro CGG [ENA]
>W1510010515 BBLU01000017 Actinomycetota Demequina mangrovi NBRC 105856 [BBLU] 16398 16324 - Pro CGG [ENA]
>W1510015470 BBRA01000001 Actinomycetota Demequina flava NBRC 105854 [BBRA] 976366 976290 - Pro CGG [ENA]
>W1510015509 BBRB01000001 Actinomycetota Demequina sediminicola NBRC 105855 [BBRB] 637098 637022 - Pro CGG [ENA]
>W1510015583 BBRD01000001 Actinomycetota Demequina aestuarii NBRC 106260 [BBRD] 174808 174884 + Pro CGG [ENA]
>W1510015642 BBRE01000001 Actinomycetota Demequina oxidasica NBRC 106264 [BBRE] 971236 971162 - Pro CGG [ENA]
>W1510015676 BBRF01000001 Actinomycetota Demequina aurantiaca NBRC 106265 [BBRF] 973157 973231 + Pro CGG [ENA]
>W1510015738 BBRG01000001 Actinomycetota Demequina globuliformis NBRC 106266 [BBRG] 935513 935437 - Pro CGG [ENA]
>W1510089378 CECE01000003 Actinomycetota Arthrobacter koreensis 5J12A [CECE] 125212 125136 - Pro CGG [ENA]
>C10107431 CP001867 Actinomycetota Geodermatophilus obscurus DSM 43160 [CP001867] 560081 560007 - Pro CGG [Ensembl]
>C10111754 CP001819 Actinomycetota Sanguibacter keddieii DSM 10542 [CP001819] 541228 541152 - Pro CGG [Ensembl]
>W11100690 ABUN01000021 Actinomycetota Sanguibacter keddieii DSM 10542 [ABUN] 63819 63895 + Pro CGG [ENA]
>W1511351484 JRNH01000008 Actinomycetota Pseudoglutamicibacter albus DNF00011 [JRNH] 882 956 + Pro CGG [ENA]
>W11138432 AEIQ01000042 Actinomycetota Dermacoccus sp. Ellin185 [AEIQ] 106587 106511 - Pro CGG [ENA]
>W1511629625 LDCM01000004 Actinomycetota Dermacoccus sp. PE3 [LDCM] 380209 380133 - Pro CGG [ENA]
>W11155916 AFAQ01000541 Actinomycetota Rhodococcus sp. R04 [AFAQ] 1444 1520 + Pro CGG [ENA]
>W1511699875 LGIU01000097 Actinomycetota Arthrobacter sp. RIT-PI-e [LGIU] 49083 49159 + Pro CGG [ENA]
>C161063224 CP013979 Actinomycetota Agromyces aureus AR33 [CP013979] 1360369 1360295 - Pro CGG [Ensembl]
>W1610067278 BCQM01000001 Actinomycetota Arthrobacter luteolus NBRC 107841 [BCQM] 726138 726214 + Pro CGG [ENA]
>W1610068996 BCRT01000007 Actinomycetota Sanguibacter suarezii NBRC 16159 [BCRT] 101120 101044 - Pro CGG [ENA]
>W1610675868 LKIU01000002 Actinomycetota Arthrobacter sp. Edens01 [LKIU] 123313 123237 - Pro CGG [ENA]
>W1610722665 LMCU01000001 Actinomycetota Leifsonia sp. Root112D2 [LMCU] 245822 245896 + Pro CGG [ENA]
>W1610726695 LMFU01000002 Actinomycetota Agromyces sp. Root1464 [LMFU] 1115294 1115370 + Pro CGG [ENA]
>W1610730270 LMIR01000002 Actinomycetota Agromyces sp. Root81 [LMIR] 275662 275738 + Pro CGG [ENA]
>W1610732957 LMKQ01000001 Actinomycetota Agromyces sp. Leaf222 [LMKQ] 1286768 1286694 - Pro CGG [ENA]
>W1610734521 LMLU01000001 Actinomycetota Arthrobacter sp. Leaf234 [LMLU] 1000193 1000117 - Pro CGG [ENA]
>W1610735278 LMMJ01000009 Actinomycetota Curtobacterium sp. Leaf261 [LMMJ] 222368 222442 + Pro CGG [ENA]
>W1610741222 LMRH01000003 Actinomycetota Sanguibacter sp. Leaf3 [LMRH] 651197 651121 - Pro CGG [ENA]
>W1610851154 LQBM01000001 Actinomycetota Nesterenkonia jeotgali [LQBM] 682015 681939 - Pro CGG [ENA]
>W1610913974 LSJT01000011 Actinomycetota Dermacoccus sp. CCH2-D9 [LSJT] 11347 11271 - Pro CGG [ENA]
>W1610946138 LUYM01000003 Actinomycetota Actinomycetales bacterium Actino_02 [LUYM] 28257 28181 - Pro CGG [ENA]
>W1710050238 BBRH01000011 Actinomycetota Demequina sp. NBRC 110051 [BBRH] 174545 174469 - Pro CGG [ENA]
>W1710050321 BBRJ01000002 Actinomycetota Demequina sp. NBRC 110053 [BBRJ] 1390742 1390818 + Pro CGG [ENA]
>W1710050418 BBRL01000004 Actinomycetota Demequina sp. NBRC 110055 [BBRL] 307297 307221 - Pro CGG [ENA]
>W1710050500 BBRN01000003 Actinomycetota Demequina sp. NBRC 110057 [BBRN] 957011 956937 - Pro CGG [ENA]
>W1710064651 BCQM01000001 Actinomycetota Arthrobacter luteolus NBRC 107841 [BCQM] 726138 726214 + Pro CGG [ENA]
>W1710066369 BCRT01000007 Actinomycetota Sanguibacter suarezii NBRC 16159 [BCRT] 101120 101044 - Pro CGG [ENA]
>W1710510896 FMYH01000007 Actinomycetota Sanguibacter gelidistatuariae ISLP-3 [FMYH] 8345 8269 - Pro CGG [ENA]
>W1710522434 FNHE01000006 Actinomycetota Geodermatophilus siccatus [FNHE] 216155 216229 + Pro CGG [ENA]
>W1710524302 FNIQ01000001 Actinomycetota Geodermatophilus sp. DSM 45219 [FNIQ] 670719 670795 + Pro CGG [ENA]
>W1710526419 FNKH01000002 Actinomycetota Arthrobacter crystallopoietes [FNKH] 2918868 2918792 - Pro CGG [ENA]
>W1710530449 FNOT01000004 Actinomycetota Geodermatophilus africanus [FNOT] 419242 419319 + Pro CGG [ENA]
>W1710542652 FNZI01000002 Actinomycetota Demequina mangrovi [FNZI] 57788 57862 + Pro CGG [ENA]
>W1710554079 FOIE01000005 Actinomycetota Geodermatophilus poikilotrophus [FOIE] 335785 335859 + Pro CGG [ENA]
>W1710575410 FOZD01000001 Actinomycetota Agromyces sp. CF514 [FOZD] 1539050 1538976 - Pro CGG [ENA]
>W1710575830 FOZN01000002 Actinomycetota Agrococcus baldri [FOZN] 17427 17503 + Pro CGG [ENA]
>W1710593502 FRDM01000069 Actinomycetota Geodermatophilus obscurus [FRDM] 5952 6026 + Pro CGG [ENA]
>W1710594682 FSRJ01000001 Actinomycetota Agromyces cerinus subsp. cerinus [FSRJ] 109076 109000 - Pro CGG [ENA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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