tRNA genes clustered and arranged according to each identical group

Bacterial carbon processing by generalist species in the coastal ocean. (SRP000056)

Anticodon = GCA

HIT: 4 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.573343 (1 seq.)
>SRA1000009 SRR000281.8688 Bacterial carbon processing by generalist species in the coastal ocean. (SRP000056) 21 96 + Cys GCA [SRA]
Identical group No.697258 (1 seq.)
>SRA1000092 SRR000286.35649 Bacterial carbon processing by generalist species in the coastal ocean. (SRP000056) 1 75 + Cys GCA [SRA]
Identical group No.751583 (1 seq.)
>SRA1000100 SRR000287.33094 Bacterial carbon processing by generalist species in the coastal ocean. (SRP000056) 7 81 + Cys GCA [SRA]
Identical group No.783141 (77 seq.)
>WENV180103509 OAPA01058298 [OAPA] marine metagenome; ENVO:00002010 129 202 + Cys GCA [ENA]
>WENV180104598 OAPC01039564 [OAPC] marine metagenome; na 222 295 + Cys GCA [ENA]
>WENV180113127 OAPQ01003317 [OAPQ] marine metagenome; ENVO: 00002149 947 874 - Cys GCA [ENA]
>WENV180113798 OAPR01025728 [OAPR] marine metagenome; seawater 210 283 + Cys GCA [ENA]
>WENV180115806 OAPT01038776 [OAPT] marine metagenome; seawater 221 148 - Cys GCA [ENA]
>WENV180358689 OBNQ01003716 [OBNQ] marine metagenome; ENVO 00002150 902 829 - Cys GCA [ENA]
>WENV180360336 OBNT01061452 [OBNT] marine metagenome; Sea Water 112 185 + Cys GCA [ENA]
>WENV180362420 OBNW01157898 [OBNW] marine metagenome; ENVO:00002010, 'SEA WATER 162 235 + Cys GCA [ENA]
>WENV180362519 OBNX01002240 [OBNX] marine metagenome; ENVO:00002010 1206 1279 + Cys GCA [ENA]
>WENV180363709 OBNZ01001284 [OBNZ] marine metagenome; ENVO:00002010 274 347 + Cys GCA [ENA]
>WENV180368946 OBOG01008430 [OBOG] marine metagenome; seawater 398 471 + Cys GCA [ENA]
>WENV180375347 OBOL01003743 [OBOL] marine metagenome; Surface water 1138 1065 - Cys GCA [ENA]
>WENV180379805 OBOP01154560 [OBOP] marine metagenome; water 126 53 - Cys GCA [ENA]
>WENV180380342 OBOQ01032157 [OBOQ] marine metagenome; Fridge 191 264 + Cys GCA [ENA]
>WENV180381902 OBOS01042913 [OBOS] marine metagenome; ENVO 00002150 135 208 + Cys GCA [ENA]
>WENV180382353 OBOT01002111 [OBOT] marine metagenome; 0 792 719 - Cys GCA [ENA]
>WENV180383302 OBOU01030087 [OBOU] marine metagenome; ENV:00002010 215 288 + Cys GCA [ENA]
>WENV180390160 OBPK01038440 [OBPK] marine metagenome; Sterile flask 331 404 + Cys GCA [ENA]
>WENV180390798 OBPL01027539 [OBPL] marine metagenome; Sterivex filter 360 287 - Cys GCA [ENA]
>WENV180391470 OBPN01002815 [OBPN] marine metagenome; seawater 1041 968 - Cys GCA [ENA]
>WENV180392347 OBPO01047297 [OBPO] marine metagenome; seawater 315 242 - Cys GCA [ENA]
>WENV180393374 OBPQ01027644 [OBPQ] marine metagenome; polypropylene bottle 90 163 + Cys GCA [ENA]
>WENV180395401 OBPT01015982 [OBPT] marine metagenome; ENVO:00002010 seawater 936 863 - Cys GCA [ENA]
>WENV180398199 OBQA01000950 [OBQA] marine metagenome; PVDF and polycarbonate filters 1348 1421 + Cys GCA [ENA]
>WENV180398514 OBQA01043587 [OBQA] marine metagenome; PVDF and polycarbonate filters 439 512 + Cys GCA [ENA]
>WENV180586777 OCON01001889 [OCON] marine metagenome; seawater 1814 1741 - Cys GCA [ENA]
>WENV180587309 OCON01162975 [OCON] marine metagenome; seawater 86 13 - Cys GCA [ENA]
>WENV180588904 OCOQ01015838 [OCOQ] marine metagenome; ENVO:00002010 65 138 + Cys GCA [ENA]
>WENV180590892 OCOU01028833 [OCOU] marine metagenome; Water 174 101 - Cys GCA [ENA]
>WENV180595240 OCPB01053751 [OCPB] marine metagenome; ENVO:00002149 114 187 + Cys GCA [ENA]
>WENV180595513 OCPD01057068 [OCPD] marine metagenome; Mesotrophic water 113 40 - Cys GCA [ENA]
>WENV180638864 OCRI01034812 [OCRI] marine metagenome; Sterile flask 196 123 - Cys GCA [ENA]
>WENV180641704 OCRN01028431 [OCRN] marine metagenome; ENVO:00002010, 'SEA WATER 354 427 + Cys GCA [ENA]
>WENV182552010 OJCJ01002960 [OJCJ] seawater metagenome; Sea water 1091 1164 + Cys GCA [ENA]
>WENV182553602 OJCR01014109 [OJCR] seawater metagenome; Sea water 644 571 - Cys GCA [ENA]
>WENV182556145 OJDG01000628 [OJDG] seawater metagenome; Sea water 2111 2184 + Cys GCA [ENA]
>WENV182579552 OJGS01021810 [OJGS] seawater metagenome; Sea water 163 90 - Cys GCA [ENA]
>WENV182582862 OJHC01001038 [OJHC] seawater metagenome; Sea water 430 357 - Cys GCA [ENA]
>WENV183700028 OZSS01086482 [OZSS] metagenome; Seawater sample 440 513 + Cys GCA [ENA]
>WENV170274914 CERM01051601 [CERM] marine metagenome genome assembly TARA_067_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 195 268 + Cys GCA [ENA]
>WENV170298378 CESF01105279 [CESF] marine metagenome genome assembly TARA_093_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 499 572 + Cys GCA [ENA]
>WENV170305941 CESI01292707 [CESI] marine metagenome genome assembly TARA_082_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 581 654 + Cys GCA [ENA]
>WENV170473988 CEVH01090027 [CEVH] marine metagenome genome assembly TARA_141_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 197 270 + Cys GCA [ENA]
>WENV170790410 MDSV01065629 [MDSV] marine metagenome; seawater 2997 2924 - Cys GCA [ENA]
>WENV170790823 MDSV01072390 [MDSV] marine metagenome; seawater 985 1058 + Cys GCA [ENA]
>WENV170791512 MDSV01084532 [MDSV] marine metagenome; seawater 6961 6888 - Cys GCA [ENA]
>WENV170833218 MDSZ01076021 [MDSZ] marine metagenome; seawater 138 65 - Cys GCA [ENA]
>WENV170835737 MDSZ01119440 [MDSZ] marine metagenome; seawater 2580 2653 + Cys GCA [ENA]
>WENV170836082 MDSZ01124797 [MDSZ] marine metagenome; seawater 2995 3068 + Cys GCA [ENA]
>WENV170857709 MDTB01012321 [MDTB] marine metagenome; seawater 7808 7735 - Cys GCA [ENA]
>WENV170870248 MDTB01188940 [MDTB] marine metagenome; seawater 747 820 + Cys GCA [ENA]
>WENV170894483 MDTD01066236 [MDTD] marine metagenome; seawater 79 6 - Cys GCA [ENA]
>WENV170896610 MDTD01098292 [MDTD] marine metagenome; seawater 3724 3651 - Cys GCA [ENA]
>WENV170933570 MDTG01223089 [MDTG] marine metagenome; seawater 80 7 - Cys GCA [ENA]
>WENV170935735 MDTG01262530 [MDTG] marine metagenome; seawater 341 268 - Cys GCA [ENA]
>WENV170943453 MDTG01397487 [MDTG] marine metagenome; seawater 2826 2753 - Cys GCA [ENA]
>WENV023349 AACY020718849 Marine microbial communities from Global Ocean Sampling (GOS) 124 49 - Cys GCA [ENA]
>SRA1000091 SRR000286.30070 Bacterial carbon processing by generalist species in the coastal ocean. (SRP000056) 4 77 + Cys GCA [SRA]
>WENV036422 AACY021778344 Marine microbial communities from Global Ocean Sampling (GOS) 713 786 + Cys GCA [ENA]
>C10110218 CP001751 Alphaproteobacteria Candidatus Puniceispirillum marinum IMCC1322 [CP001751] 464356 464429 + Cys GCA [Ensembl]
>WENV038415 AACY021932055 Marine microbial communities from Global Ocean Sampling (GOS) 464 391 - Cys GCA [ENA]
>WENV043617 AACY022341834 Marine microbial communities from Global Ocean Sampling (GOS) 177 252 + Cys GCA [ENA]
>WENV044744 AACY022449498 Marine microbial communities from Global Ocean Sampling (GOS) 365 440 + Cys GCA [ENA]
>WENV044822 AACY022456762 Marine microbial communities from Global Ocean Sampling (GOS) 594 521 - Cys GCA [ENA]
>WENV056200 AACY023251064 Marine microbial communities from Global Ocean Sampling (GOS) 445 372 - Cys GCA [ENA]
>WENV059398 AACY023364819 Marine microbial communities from Global Ocean Sampling (GOS) 887 812 - Cys GCA [ENA]
>WENV063889 AACY023521444 Marine microbial communities from Global Ocean Sampling (GOS) 467 540 + Cys GCA [ENA]
>WENV064835 AACY023560937 Marine microbial communities from Global Ocean Sampling (GOS) 533 458 - Cys GCA [ENA]
>WENV066987 AACY023670972 Marine microbial communities from Global Ocean Sampling (GOS) 839 766 - Cys GCA [ENA]
>WENV072584 AACY023889926 Marine microbial communities from Global Ocean Sampling (GOS) 9 82 + Cys GCA [ENA]
>WENV073299 AACY023922150 Marine microbial communities from Global Ocean Sampling (GOS) 480 553 + Cys GCA [ENA]
>WENV073445 AACY023927795 Marine microbial communities from Global Ocean Sampling (GOS) 1728 1655 - Cys GCA [ENA]
>W1610597440 LFEV01000013 Alphaproteobacteria Alphaproteobacteria bacterium casp-alpha10 [LFEV] 17256 17183 - Cys GCA [ENA]
>W1610597462 LFEV01000055 Alphaproteobacteria Alphaproteobacteria bacterium casp-alpha10 [LFEV] 10688 10615 - Cys GCA [ENA]
>WENV074367 AACY023972053 Marine microbial communities from Global Ocean Sampling (GOS) 909 984 + Cys GCA [ENA]
>W1710718764 LFEV01000013 Alphaproteobacteria Alphaproteobacteria bacterium casp-alpha10 [LFEV] 17256 17183 - Cys GCA [ENA]
>W1710718786 LFEV01000055 Alphaproteobacteria Alphaproteobacteria bacterium casp-alpha10 [LFEV] 10688 10615 - Cys GCA [ENA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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