tRNA genes clustered and arranged according to each identical group

Bacterial carbon processing by generalist species in the coastal ocean. (SRP000056)

Anticodon = GGT

HIT: 2 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.459030 (129 seq.)
>WENV014361 AACY020398508 Marine microbial communities from Global Ocean Sampling (GOS) 814 891 + Thr GGT [ENA]
>WENV180102190 OAOY01000300 [OAOY] marine metagenome; Water 2021 1948 - Thr GGT [ENA]
>WENV180105061 OAPD01003090 [OAPD] marine metagenome; 2010 1369 1296 - Thr GGT [ENA]
>WENV180107560 OAPH01000020 [OAPH] marine metagenome; seawater 2326 2253 - Thr GGT [ENA]
>WENV180107629 OAPH01000907 [OAPH] marine metagenome; seawater 1706 1779 + Thr GGT [ENA]
>WENV180112284 OAPP01008399 [OAPP] marine metagenome; Surface water 341 268 - Thr GGT [ENA]
>WENV180273651 OBEV01000007 [OBEV] marine metagenome; marine 2475 2548 + Thr GGT [ENA]
>WENV180356917 OBNM01000141 [OBNM] marine metagenome; none 2875 2802 - Thr GGT [ENA]
>WENV180363205 OBNY01007346 [OBNY] marine metagenome; ENVO:00002010 545 472 - Thr GGT [ENA]
>WENV180373618 OBOJ01007211 [OBOJ] marine metagenome; seawater 443 516 + Thr GGT [ENA]
>WENV180377967 OBOO01000104 [OBOO] marine metagenome; ENVO 00002150 3514 3441 - Thr GGT [ENA]
>WENV180397098 OBPX01006843 [OBPX] marine metagenome; vv 86 159 + Thr GGT [ENA]
>WENV017259 AACY020480868 Marine microbial communities from Global Ocean Sampling (GOS) 1014 1089 + Thr GGT [ENA]
>WENV180588300 OCOP01020482 [OCOP] marine metagenome; water 202 129 - Thr GGT [ENA]
>WENV180588821 OCOQ01000829 [OCOQ] marine metagenome; ENVO:00002010 292 365 + Thr GGT [ENA]
>WENV180637731 OCRG01101592 [OCRG] marine metagenome; seawater 229 302 + Thr GGT [ENA]
>WENV180687738 OCZA010017767 [OCZA] marine metagenome; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1435 1508 + Thr GGT [ENA]
>WENV017419 AACY020484222 Marine microbial communities from Global Ocean Sampling (GOS) 724 799 + Thr GGT [ENA]
>WENV017668 AACY020489283 Marine microbial communities from Global Ocean Sampling (GOS) 1050 1127 + Thr GGT [ENA]
>WENV017703 AACY020490197 Marine microbial communities from Global Ocean Sampling (GOS) 570 493 - Thr GGT [ENA]
>WENV018644 AACY020514851 Marine microbial communities from Global Ocean Sampling (GOS) 941 864 - Thr GGT [ENA]
>WENV020445 AACY020554012 Marine microbial communities from Global Ocean Sampling (GOS) 1031 956 - Thr GGT [ENA]
>WENV020464 AACY020554229 Marine microbial communities from Global Ocean Sampling (GOS) 3720 3643 - Thr GGT [ENA]
>WENV020589 AACY020556071 Marine microbial communities from Global Ocean Sampling (GOS) 1368 1445 + Thr GGT [ENA]
>WENV170122096 CENN01046418 [CENN] marine metagenome genome assembly TARA_023_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 132 59 - Thr GGT [ENA]
>WENV170134552 CENU01118713 [CENU] marine metagenome genome assembly TARA_025_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 142 69 - Thr GGT [ENA]
>WENV170145808 CENZ01011996 [CENZ] marine metagenome genome assembly TARA_025_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 458 531 + Thr GGT [ENA]
>WENV170177887 CEOU01134902 [CEOU] marine metagenome genome assembly TARA_065_DCM_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 172 99 - Thr GGT [ENA]
>WENV170247492 CEQQ01042403 [CEQQ] marine metagenome genome assembly TARA_076_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 75 2 - Thr GGT [ENA]
>WENV170281530 CERS01063386 [CERS] marine metagenome genome assembly TARA_068_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 37 110 + Thr GGT [ENA]
>WENV170323820 CESS01028291 [CESS] marine metagenome genome assembly TARA_023_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 37 110 + Thr GGT [ENA]
>WENV170579016 FUFK010037756 [FUFK] metagenome; unknown 27804 27877 + Thr GGT [ENA]
>WENV170579701 FUFK010040454 [FUFK] metagenome; unknown 62347 62420 + Thr GGT [ENA]
>WENV170580445 FUFK010046489 [FUFK] metagenome; unknown 72180 72107 - Thr GGT [ENA]
>WENV170580821 FUFK010051931 [FUFK] metagenome; unknown 15424 15351 - Thr GGT [ENA]
>WENV170584511 FUFK010219391 [FUFK] metagenome; unknown 4372 4445 + Thr GGT [ENA]
>WENV170585296 FUFK010277237 [FUFK] metagenome; unknown 92 165 + Thr GGT [ENA]
>WENV170585379 FUFK010284499 [FUFK] metagenome; unknown 71 144 + Thr GGT [ENA]
>WENV170586811 FUFK010445959 [FUFK] metagenome; unknown 107 180 + Thr GGT [ENA]
>WENV170589149 FUFK010621233 [FUFK] metagenome; unknown 190 263 + Thr GGT [ENA]
>WENV170590833 FUFK010740765 [FUFK] metagenome; unknown 5942 5869 - Thr GGT [ENA]
>WENV170591248 FUFK010757084 [FUFK] metagenome; unknown 388 315 - Thr GGT [ENA]
>WENV170617728 FUWD012935468 [FUWD] metagenome; unknown 518 445 - Thr GGT [ENA]
>WENV170625388 FUWD013196949 [FUWD] metagenome; unknown 502 429 - Thr GGT [ENA]
>WENV170633628 FUWD013399559 [FUWD] metagenome; unknown 502 429 - Thr GGT [ENA]
>WENV170727512 LULE01000303 [LULE] marine metagenome; Red Sea water column Station 192 - depth 10m 40 113 + Thr GGT [ENA]
>WENV170727734 LULE01001625 [LULE] marine metagenome; Red Sea water column Station 192 - depth 10m 5153 5080 - Thr GGT [ENA]
>WENV170731485 LULI01000546 [LULI] marine metagenome; Red Sea water column Station 169 - depth 50m 40 113 + Thr GGT [ENA]
>WENV170732695 LULJ01000605 [LULJ] marine metagenome; Red Sea water column Station 169 - depth 25m 40 113 + Thr GGT [ENA]
>WENV170733470 LULJ01021216 [LULJ] marine metagenome; Red Sea water column Station 169 - depth 25m 859 786 - Thr GGT [ENA]
>WENV170734012 LULK01000827 [LULK] marine metagenome; Red Sea water column Station 169 - depth 10m 40 113 + Thr GGT [ENA]
>WENV170737539 LULO01000573 [LULO] marine metagenome; Red Sea water column Station 149 - depth 50m 40 113 + Thr GGT [ENA]
>WENV170738347 LULP01000020 [LULP] marine metagenome; Red Sea water column Station 149 - depth 25m 40 113 + Thr GGT [ENA]
>WENV170738683 LULP01002046 [LULP] marine metagenome; Red Sea water column Station 149 - depth 25m 3577 3650 + Thr GGT [ENA]
>WENV170739308 LULQ01000168 [LULQ] marine metagenome; Red Sea water column Station 149 - depth 10m 40 113 + Thr GGT [ENA]
>WENV170742010 LULU01000027 [LULU] marine metagenome; Red Sea water column Station 108 - depth 50m 40 113 + Thr GGT [ENA]
>WENV170742031 LULU01000163 [LULU] marine metagenome; Red Sea water column Station 108 - depth 50m 42 115 + Thr GGT [ENA]
>WENV170742704 LULV01000179 [LULV] marine metagenome; Red Sea water column Station 108 - depth 25m 9404 9331 - Thr GGT [ENA]
>WENV170743487 LULW01000212 [LULW] marine metagenome; Red Sea water column Station 108 - depth 10m 26323 26250 - Thr GGT [ENA]
>WENV170743497 LULW01000246 [LULW] marine metagenome; Red Sea water column Station 108 - depth 10m 40 113 + Thr GGT [ENA]
>WENV170746739 LUMB01000002 [LUMB] marine metagenome; Red Sea water column Station 91 - depth 25m 40 113 + Thr GGT [ENA]
>WENV170746770 LUMB01000106 [LUMB] marine metagenome; Red Sea water column Station 91 - depth 25m 36680 36607 - Thr GGT [ENA]
>WENV170747160 LUMC01000001 [LUMC] marine metagenome; Red Sea water column Station 91 - depth 10m 40 113 + Thr GGT [ENA]
>WENV170750588 LUMH01000003 [LUMH] marine metagenome; Red Sea water column Station 34 - depth 25m 40 113 + Thr GGT [ENA]
>WENV170750680 LUMH01000260 [LUMH] marine metagenome; Red Sea water column Station 34 - depth 25m 9155 9082 - Thr GGT [ENA]
>WENV170751197 LUMI01000032 [LUMI] marine metagenome; Red Sea water column Station 34 - depth 10m 40 113 + Thr GGT [ENA]
>WENV170751731 LUMI01006740 [LUMI] marine metagenome; Red Sea water column Station 34 - depth 10m 2313 2240 - Thr GGT [ENA]
>WENV170754635 LUMM01000002 [LUMM] marine metagenome; Red Sea water column Station 22 - depth 50m 40 113 + Thr GGT [ENA]
>WENV170755825 LUMO01000001 [LUMO] marine metagenome; Red Sea water column Station 22 - depth 10m 49427 49354 - Thr GGT [ENA]
>WENV170755916 LUMO01000507 [LUMO] marine metagenome; Red Sea water column Station 22 - depth 10m 5955 5882 - Thr GGT [ENA]
>WENV170757140 LUMQ01000040 [LUMQ] marine metagenome; Red Sea water column Station 12 - depth 25m 38100 38027 - Thr GGT [ENA]
>WENV170757704 LUMQ01006923 [LUMQ] marine metagenome; Red Sea water column Station 12 - depth 25m 1765 1692 - Thr GGT [ENA]
>WENV170758224 LUMR01000139 [LUMR] marine metagenome; Red Sea water column Station 12 - depth 10m 40 113 + Thr GGT [ENA]
>WENV170758829 LUMS01000018 [LUMS] marine metagenome; Red Sea water column Station 192 - depth 25m 40 113 + Thr GGT [ENA]
>WENV170759593 LUMT01000023 [LUMT] marine metagenome; Red Sea water column Station 192 - depth 50m 40 113 + Thr GGT [ENA]
>WENV170759773 LUMT01000445 [LUMT] marine metagenome; Red Sea water column Station 192 - depth 50m 15007 14934 - Thr GGT [ENA]
>WENV170760833 LUMU01000495 [LUMU] marine metagenome; Red Sea water column Station 192 - depth 100m 42 115 + Thr GGT [ENA]
>WENV170944899 MDUO01011058 [MDUO] marine metagenome; 30 m water sample from station 6 77 150 + Thr GGT [ENA]
>WENV022469 AACY020652327 Marine microbial communities from Global Ocean Sampling (GOS) 697 620 - Thr GGT [ENA]
>WENV022908 AACY020683822 Marine microbial communities from Global Ocean Sampling (GOS) 597 672 + Thr GGT [ENA]
>WENV023421 AACY020724145 Marine microbial communities from Global Ocean Sampling (GOS) 724 799 + Thr GGT [ENA]
>WENV024618 AACY020822992 Marine microbial communities from Global Ocean Sampling (GOS) 354 429 + Thr GGT [ENA]
>SRA1000066 SRR000285.29923 Bacterial carbon processing by generalist species in the coastal ocean. (SRP000056) 18 91 + Thr GGT [SRA]
>W1810524134 QCLQ01000006 Actinomycetota OCS155 cluster bacterium AG-414-P03 [QCLQ] 18286 18213 - Thr GGT [ENA]
>W1810524909 QCMT01000003 Actinomycetota OCS155 cluster bacterium AG-422-J23 [QCMT] 165013 165086 + Thr GGT [ENA]
>SRA1008595 SRR020490.426025 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 158 85 - Thr GGT [SRA]
>SRA1011919 SRR020493.120544 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 140 213 + Thr GGT [SRA]
>SRA1012915 SRR020493.481084 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 43 116 + Thr GGT [SRA]
>WENV029645 AACY021217102 Marine microbial communities from Global Ocean Sampling (GOS) 149 72 - Thr GGT [ENA]
>WENV030004 AACY021247519 Marine microbial communities from Global Ocean Sampling (GOS) 390 313 - Thr GGT [ENA]
>WENV031536 AACY021375655 Marine microbial communities from Global Ocean Sampling (GOS) 413 336 - Thr GGT [ENA]
>WENV032553 AACY021454062 Marine microbial communities from Global Ocean Sampling (GOS) 227 150 - Thr GGT [ENA]
>WENV033519 AACY021536318 Marine microbial communities from Global Ocean Sampling (GOS) 594 517 - Thr GGT [ENA]
>WENV033789 AACY021555036 Marine microbial communities from Global Ocean Sampling (GOS) 341 416 + Thr GGT [ENA]
>WENV034904 AACY021653034 Marine microbial communities from Global Ocean Sampling (GOS) 374 297 - Thr GGT [ENA]
>WENV037663 AACY021873438 Marine microbial communities from Global Ocean Sampling (GOS) 194 269 + Thr GGT [ENA]
>WENV037835 AACY021885761 Marine microbial communities from Global Ocean Sampling (GOS) 199 274 + Thr GGT [ENA]
>WENV038863 AACY021966477 Marine microbial communities from Global Ocean Sampling (GOS) 156 79 - Thr GGT [ENA]
>WENV042953 AACY022278632 Marine microbial communities from Global Ocean Sampling (GOS) 777 854 + Thr GGT [ENA]
>WENV043974 AACY022376489 Marine microbial communities from Global Ocean Sampling (GOS) 851 776 - Thr GGT [ENA]
>WENV045488 AACY022521865 Marine microbial communities from Global Ocean Sampling (GOS) 50 127 + Thr GGT [ENA]
>WENV047798 AACY022690345 Marine microbial communities from Global Ocean Sampling (GOS) 576 499 - Thr GGT [ENA]
>WENV047974 AACY022703427 Marine microbial communities from Global Ocean Sampling (GOS) 185 260 + Thr GGT [ENA]
>WENV048185 AACY022715965 Marine microbial communities from Global Ocean Sampling (GOS) 175 250 + Thr GGT [ENA]
>WENV048460 AACY022733535 Marine microbial communities from Global Ocean Sampling (GOS) 95 20 - Thr GGT [ENA]
>WENV049327 AACY022783053 Marine microbial communities from Global Ocean Sampling (GOS) 557 480 - Thr GGT [ENA]
>WENV049656 AACY022808221 Marine microbial communities from Global Ocean Sampling (GOS) 791 716 - Thr GGT [ENA]
>WENV049892 AACY022830993 Marine microbial communities from Global Ocean Sampling (GOS) 50 127 + Thr GGT [ENA]
>WENV050605 AACY022887333 Marine microbial communities from Global Ocean Sampling (GOS) 2 77 + Thr GGT [ENA]
>WENV051401 AACY022952817 Marine microbial communities from Global Ocean Sampling (GOS) 468 545 + Thr GGT [ENA]
>WENV059402 AACY023364839 Marine microbial communities from Global Ocean Sampling (GOS) 1359 1436 + Thr GGT [ENA]
>WENV060322 AACY023394310 Marine microbial communities from Global Ocean Sampling (GOS) 935 1010 + Thr GGT [ENA]
>WENV062431 AACY023460859 Marine microbial communities from Global Ocean Sampling (GOS) 1027 950 - Thr GGT [ENA]
>WENV062953 AACY023481784 Marine microbial communities from Global Ocean Sampling (GOS) 412 335 - Thr GGT [ENA]
>WENV071901 AACY023864550 Marine microbial communities from Global Ocean Sampling (GOS) 539 616 + Thr GGT [ENA]
>WENV073623 AACY023932666 Marine microbial communities from Global Ocean Sampling (GOS) 1500 1577 + Thr GGT [ENA]
>WENV073655 AACY023933845 Marine microbial communities from Global Ocean Sampling (GOS) 631 554 - Thr GGT [ENA]
>WENV073874 AACY023943085 Marine microbial communities from Global Ocean Sampling (GOS) 356 431 + Thr GGT [ENA]
>WENV074112 AACY023957639 Marine microbial communities from Global Ocean Sampling (GOS) 394 317 - Thr GGT [ENA]
>WENV074116 AACY023957662 Marine microbial communities from Global Ocean Sampling (GOS) 533 456 - Thr GGT [ENA]
>WENV074120 AACY023957977 Marine microbial communities from Global Ocean Sampling (GOS) 138 213 + Thr GGT [ENA]
>WENV074135 AACY023958821 Marine microbial communities from Global Ocean Sampling (GOS) 652 727 + Thr GGT [ENA]
>WENV074145 AACY023959534 Marine microbial communities from Global Ocean Sampling (GOS) 577 500 - Thr GGT [ENA]
>WENV074179 AACY023961074 Marine microbial communities from Global Ocean Sampling (GOS) 196 121 - Thr GGT [ENA]
>WENV074279 AACY023965422 Marine microbial communities from Global Ocean Sampling (GOS) 151 76 - Thr GGT [ENA]
>WENV074888 AACY024001914 Marine microbial communities from Global Ocean Sampling (GOS) 1284 1361 + Thr GGT [ENA]
>WENV008747 AACY020234989 Marine microbial communities from Global Ocean Sampling (GOS) 2749 2826 + Thr GGT [ENA]
>WENV009627 AACY020258719 Marine microbial communities from Global Ocean Sampling (GOS) 3049 3126 + Thr GGT [ENA]
>WENV009662 AACY020259705 Marine microbial communities from Global Ocean Sampling (GOS) 286 363 + Thr GGT [ENA]
Identical group No.486711 (18 seq.)
>W1711147752 LVJW01000006 Gammaproteobacteria Candidatus Thiodiazotropha endoloripes Loripes lucinalis [LVJW] 663937 663862 - Thr GGT [ENA]
>W1711147767 LVJX01000004 Gammaproteobacteria Candidatus Thiodiazotropha endoloripes Loripes lucinalis [LVJX] 951861 951936 + Thr GGT [ENA]
>W1711147806 LVJY01000003 Gammaproteobacteria Candidatus Thiodiazotropha endoloripes Loripes lucinalis [LVJY] 716678 716753 + Thr GGT [ENA]
>W1711147885 LVJZ01000003 Gammaproteobacteria Candidatus Thiodiazotropha endoloripes Loripes lucinalis [LVJZ] 341638 341563 - Thr GGT [ENA]
>W1711147911 LVKA01000011 Gammaproteobacteria Candidatus Thiodiazotropha endoloripes Loripes lucinalis [LVKA] 465698 465773 + Thr GGT [ENA]
>W1711309696 MARB01000006 Gammaproteobacteria Candidatus Thiodiazotropha endolucinida [MARB] 49914 49989 + Thr GGT [ENA]
>WENV180361819 OBNW01002826 [OBNW] marine metagenome; ENVO:00002010, 'SEA WATER 410 485 + Thr GGT [ENA]
>WENV180365055 OBOB01005464 [OBOB] marine metagenome; ENVO:00002019, 'BRACKISH WATER 339 264 - Thr GGT [ENA]
>WENV180637268 OCRG01005433 [OCRG] marine metagenome; seawater 202 127 - Thr GGT [ENA]
>WENV170695350 LGVE01080756 [LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 140 65 - Thr GGT [ENA]
>WENV170697157 LGVF01087477 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 324 399 + Thr GGT [ENA]
>WENV170697545 LGVF01154256 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 151 76 - Thr GGT [ENA]
>SRA1000107 SRR000287.38303 Bacterial carbon processing by generalist species in the coastal ocean. (SRP000056) 16 91 + Thr GGT [SRA]
>SRA1000114 SRR000287.53359 Bacterial carbon processing by generalist species in the coastal ocean. (SRP000056) 16 91 + Thr GGT [SRA]
>C151000126 AP012273 Gammaproteobacteria Thiolapillus brandeum Hiromi 1 [AP012273] 322969 323044 + Thr GGT [Ensembl]
>W11168385 AFOC01000152 Gammaproteobacteria endosymbiont of Riftia pachyptila Riftia pachyptila (vent Ph05) [AFOC] 4935 5010 + Thr GGT [ENA]
>W1610594346 LDXT01000075 Gammaproteobacteria endosymbiont of Ridgeia piscesae [LDXT] 16790 16715 - Thr GGT [ENA]
>W1710713798 LDXT01000075 Gammaproteobacteria endosymbiont of Ridgeia piscesae [LDXT] 16790 16715 - Thr GGT [ENA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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