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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
Basidiomycota
Anticodon = AAT
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.260112 (6 seq.)
>FG090800030
AE017349
Basidiomycota
Cryptococcus neoformans var. neoformans JEC21
119969
120057
+
Ile
AAT
[ENA]
¡û
>FG090800031
AE017349
Basidiomycota
Cryptococcus neoformans var. neoformans JEC21
139526
139615
+
Ile
AAT
[ENA]
¡û
>FG090800035
AE017349
Basidiomycota
Cryptococcus neoformans var. neoformans JEC21
183511
183423
-
Ile
AAT
[ENA]
¡û
>FG090800037
AE017349
Basidiomycota
Cryptococcus neoformans var. neoformans JEC21
127579
127491
-
Ile
AAT
[ENA]
¡û
>FG090800038
AE017349
Basidiomycota
Cryptococcus neoformans var. neoformans JEC21
108254
108166
-
Ile
AAT
[ENA]
¡û
>FG090800052
AE017352
Basidiomycota
Cryptococcus neoformans var. neoformans JEC21
464299
464389
+
Ile
AAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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