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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Basidiomycota
Anticodon = AGA
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.218438 (12 seq.)
>FG090200002
AE017347
Basidiomycota
Cryptococcus neoformans var. neoformans JEC21
1243078
1243172
+
Ser
AGA
[ENA]
¡û
>FU090900067
AE017347
Basidiomycota
Cryptococcus neoformans var. neoformans JEC21
1243078
1243172
+
Ser
AGA
[ENA]
¡û
>FG091200001
AE017341
Basidiomycota
Cryptococcus neoformans var. neoformans JEC21
574947
575041
+
Ser
AGA
[ENA]
¡û
>FG091200002
AE017341
Basidiomycota
Cryptococcus neoformans var. neoformans JEC21
575303
575209
-
Ser
AGA
[ENA]
¡û
>FG091200003
AE017341
Basidiomycota
Cryptococcus neoformans var. neoformans JEC21
594060
594154
+
Ser
AGA
[ENA]
¡û
>FG091200004
AE017341
Basidiomycota
Cryptococcus neoformans var. neoformans JEC21
605104
605010
-
Ser
AGA
[ENA]
¡û
>FG091200007
AE017348
Basidiomycota
Cryptococcus neoformans var. neoformans JEC21
1099913
1099819
-
Ser
AGA
[ENA]
¡û
>FG091900190
AE017341
Basidiomycota
Cryptococcus neoformans var. neoformans JEC21
574947
575041
+
Ser
AGA
[ENA]
¡û
>FG091900191
AE017341
Basidiomycota
Cryptococcus neoformans var. neoformans JEC21
594060
594154
+
Ser
AGA
[ENA]
¡û
>FG091900197
AE017341
Basidiomycota
Cryptococcus neoformans var. neoformans JEC21
605104
605010
-
Ser
AGA
[ENA]
¡û
>FG091900198
AE017341
Basidiomycota
Cryptococcus neoformans var. neoformans JEC21
575303
575209
-
Ser
AGA
[ENA]
¡û
>FG091900216
AE017348
Basidiomycota
Cryptococcus neoformans var. neoformans JEC21
1099913
1099819
-
Ser
AGA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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