This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
Basidiomycota
Anticodon = AGC
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.462567 (7 seq.)
>FG090800039
AE017349
Basidiomycota
Cryptococcus neoformans var. neoformans JEC21
81257
81166
-
Ala
AGC
[ENA]
¡û
>FG090800040
AE017349
Basidiomycota
Cryptococcus neoformans var. neoformans JEC21
59158
59067
-
Ala
AGC
[ENA]
¡û
>FG090800050
AE017351
Basidiomycota
Cryptococcus neoformans var. neoformans JEC21
334687
334593
-
Ala
AGC
[ENA]
¡û
>FG091800005
AE017341
Basidiomycota
Cryptococcus neoformans var. neoformans JEC21
848246
848341
+
Ala
AGC
[ENA]
¡û
>FG091800006
AE017341
Basidiomycota
Cryptococcus neoformans var. neoformans JEC21
853475
853569
+
Ala
AGC
[ENA]
¡û
>FG091800007
AE017341
Basidiomycota
Cryptococcus neoformans var. neoformans JEC21
855458
855550
+
Ala
AGC
[ENA]
¡û
>FG091800021
AE017346
Basidiomycota
Cryptococcus neoformans var. neoformans JEC21
1054136
1054042
-
Ala
AGC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK