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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Chlamydiae
Anticodon = GTG
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.281927 (11 seq.)
>W1711408027
MGLO01000010
Chlamydiota
Chlamydiae bacterium GWA2_50_15 [MGLO]
32847
32921
+
His
GTG
[ENA]
¡û
>W1711408078
MGLP01000034
Chlamydiota
Chlamydiae bacterium GWC2_50_10 [MGLP]
9073
9147
+
His
GTG
[ENA]
¡û
>W1711408097
MGLQ01000058
Chlamydiota
Chlamydiae bacterium GWF2_49_8 [MGLQ]
9111
9185
+
His
GTG
[ENA]
¡û
>W141229854
BASK01001308
Chlamydiota
Neochlamydia sp. S13 [BASK]
53028
53102
+
His
GTG
[ENA]
¡û
>PL191000002
AP017978
Chlamydiae
Neochlamydia sp. S13 plasmid:pS13 (AP017978)
100382
100456
+
His
GTG
[ENA]
¡û
>W1910725375
MGLT01000016
Chlamydiota
Chlamydiae bacterium RIFCSPHIGHO2_02_FULL_49_29 [MGLT]
43688
43614
-
His
GTG
[ENA]
¡û
>W1910725503
MGLX01000029
Chlamydiota
Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_32 [MGLX]
43781
43707
-
His
GTG
[ENA]
¡û
>W1910725651
MGMC01000025
Chlamydiota
Chlamydiae bacterium RIFCSPLOWO2_02_FULL_49_12 [MGMC]
44752
44678
-
His
GTG
[ENA]
¡û
>W1910725728
MGME01000021
Chlamydiota
Chlamydiae bacterium RIFCSPLOWO2_12_FULL_49_12 [MGME]
9074
9148
+
His
GTG
[ENA]
¡û
>W1511358790
JRXI01000061
Chlamydiota
Neochlamydia sp. TUME1 [JRXI]
23355
23281
-
His
GTG
[ENA]
¡û
>W1511364952
JSDQ01000086
Chlamydiota
Neochlamydia sp. EPS4 [JSDQ]
14204
14278
+
His
GTG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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