This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
Chlamydiae
Anticodon = TGT
HIT:
2 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.289376 (5 seq.)
>W1711502178
MKSK01000006
Chlamydiota
Chlamydiales bacterium 38-26 [MKSK]
239679
239607
-
Thr
TGT
[ENA]
¡û
>W141229848
BASK01001261
Chlamydiota
Neochlamydia sp. S13 [BASK]
7675
7747
+
Thr
TGT
[ENA]
¡û
>PL191000005
AP017978
Chlamydiae
Neochlamydia sp. S13 plasmid:pS13 (AP017978)
136557
136485
-
Thr
TGT
[ENA]
¡û
>W1511358788
JRXI01000058
Chlamydiota
Neochlamydia sp. TUME1 [JRXI]
9656
9728
+
Thr
TGT
[ENA]
¡û
>W1511364955
JSDQ01000089
Chlamydiota
Neochlamydia sp. EPS4 [JSDQ]
12410
12338
-
Thr
TGT
[ENA]
¡û
Identical group No.455966 (1 seq.)
>PL171001858
LN879503
Chlamydiae
Protochlamydia naegleriophila KNic plasmid:pPNK
104626
104699
+
Thr
TGT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK