This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Anticodon = AAG
HIT:
3 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.176345 (1 seq.)
>SRA1016555
SRR023846.563468
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
70
152
+
Leu
AAG
[SRA]
Identical group No.230043 (5 seq.)
>SRA1014430
SRR023845.136789
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
238
156
-
Leu
AAG
[SRA]
>SRA1015382
SRR023846.37915
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
111
193
+
Leu
AAG
[SRA]
>SRA1015878
SRR023846.237778
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
7
89
+
Leu
AAG
[SRA]
>SRA1015904
SRR023846.250868
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
102
184
+
Leu
AAG
[SRA]
>SRA1016453
SRR023846.504318
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
81
163
+
Leu
AAG
[SRA]
Identical group No.232044 (2 seq.)
>SRA1015875
SRR023846.237290
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
127
46
-
Leu
AAG
[SRA]
>SRA1016493
SRR023846.529523
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
127
46
-
Leu
AAG
[SRA]
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK