This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Anticodon = CTC
HIT:
6 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.525575 (2 seq.)
>SRA1014668
SRR023845.251439
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
173
246
+
Glu
CTC
[SRA]
>SRA1016041
SRR023846.320579
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
36
109
+
Glu
CTC
[SRA]
Identical group No.628150 (1 seq.)
>SRA1015541
SRR023846.104051
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
35
109
+
Glu
CTC
[SRA]
Identical group No.628169 (1 seq.)
>SRA1016218
SRR023846.406364
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
259
183
-
Glu
CTC
[SRA]
Identical group No.697314 (1 seq.)
>SRA1014865
SRR023845.351377
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
237
163
-
Glu
CTC
[SRA]
Identical group No.761292 (1 seq.)
>SRA1015312
SRR023846.12918
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
160
86
-
Glu
CTC
[SRA]
Identical group No.761304 (1 seq.)
>SRA1015951
SRR023846.279595
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
223
149
-
Glu
CTC
[SRA]
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK