tRNA genes clustered and arranged according to each identical group

Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)

Anticodon = TCA

HIT: 4 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.749 (5 seq.)
>C181177169 CP029343 Betaproteobacteria Massilia oculi CCUG 43427 [CP029343] 161352 161256 - SeC TCA - ¡û
>W1910576115 JSAB01000053 Betaproteobacteria Massilia aurea CFS-1 [JSAB] 21749 21845 + Sec TCA [ENA] ¡û
>W1810673306 QJTZ01000037 Gammaproteobacteria Pseudomonas syringae pv. pisi 1452A [QJTZ] 26259 26163 - Sec TCA [ENA] ¡û
>SRA1014531 SRR023845.186472 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 49 145 + SeC TCA [SRA]
>SRA1016093 SRR023846.345785 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 76 172 + SeC TCA [SRA]
Identical group No.3048 (1 seq.)
>SRA1014362 SRR023845.104501 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 215 120 - SeC TCA [SRA]
Identical group No.305868 (29 seq.)
>WENV170176234 CEOS01053911 [CEOS] marine metagenome genome assembly TARA_056_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2980 2909 - SeC TCA [ENA] ¢þ
>WENV170229538 CEQG01129533 [CEQG] marine metagenome genome assembly TARA_076_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 45 116 + SeC TCA [ENA] ¢þ
>WENV170241449 CEQN01289523 [CEQN] marine metagenome genome assembly TARA_078_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 80 151 + SeC TCA [ENA] ¢þ
>WENV170259720 CEQY01200954 [CEQY] marine metagenome genome assembly TARA_070_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4916 4987 + SeC TCA [ENA] ¢þ
>WENV170264013 CERC01133512 [CERC] marine metagenome genome assembly TARA_070_MES_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 580 651 + SeC TCA [ENA] ¢þ
>WENV170265505 CERD01201974 [CERD] marine metagenome genome assembly TARA_070_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 445 374 - SeC TCA [ENA] ¢þ
>WENV170278786 CERQ01126443 [CERQ] marine metagenome genome assembly TARA_065_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 6631 6702 + SeC TCA [ENA] ¢þ
>WENV170309907 CESL01240955 [CESL] marine metagenome genome assembly TARA_102_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 17528 17599 + SeC TCA [ENA] ¢þ
>WENV170334663 CESY01288619 [CESY] marine metagenome genome assembly TARA_098_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 27196 27125 - SeC TCA [ENA] ¢þ
>WENV170336709 CETA01031838 [CETA] marine metagenome genome assembly TARA_109_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 6882 6811 - SeC TCA [ENA] ¢þ
>WENV170340022 CETB01172361 [CETB] marine metagenome genome assembly TARA_112_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3611 3682 + SeC TCA [ENA] ¢þ
>WENV170348140 CETG01185006 [CETG] marine metagenome genome assembly TARA_122_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 958 1029 + SeC TCA [ENA] ¢þ
>WENV170355559 CETI01246385 [CETI] marine metagenome genome assembly TARA_111_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 483 554 + SeC TCA [ENA] ¢þ
>WENV170357244 CETJ01138242 [CETJ] marine metagenome genome assembly TARA_122_MES_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 168 97 - SeC TCA [ENA] ¢þ
>WENV170366459 CETO01067240 [CETO] marine metagenome genome assembly TARA_122_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 26228 26299 + SeC TCA [ENA] ¢þ
>WENV170371269 CETR01268632 [CETR] marine metagenome genome assembly TARA_112_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3611 3682 + SeC TCA [ENA] ¢þ
>WENV170373506 CETS01295305 [CETS] marine metagenome genome assembly TARA_122_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1457 1386 - SeC TCA [ENA] ¢þ
>WENV170375512 CETT01303296 [CETT] marine metagenome genome assembly TARA_110_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 13387 13316 - SeC TCA [ENA] ¢þ
>WENV170378166 CETU01343929 [CETU] marine metagenome genome assembly TARA_142_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2019 2090 + SeC TCA [ENA] ¢þ
>WENV170475730 CEVI01027657 [CEVI] marine metagenome genome assembly TARA_142_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2490 2419 - SeC TCA [ENA] ¢þ
>WENV170477514 CEVJ01080746 [CEVJ] marine metagenome genome assembly TARA_146_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 25340 25411 + SeC TCA [ENA] ¢þ
>WENV170478934 CEVK01107700 [CEVK] marine metagenome genome assembly TARA_149_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1477 1548 + SeC TCA [ENA] ¢þ
>WENV170483574 CEVM01126703 [CEVM] marine metagenome genome assembly TARA_145_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4581 4652 + SeC TCA [ENA] ¢þ
>WENV170488071 CEVO01118677 [CEVO] marine metagenome genome assembly TARA_152_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4111 4182 + SeC TCA [ENA] ¢þ
>WENV170492573 CEVQ01140924 [CEVQ] marine metagenome genome assembly TARA_148b_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1493 1564 + SeC TCA [ENA] ¢þ
>WENV170527771 CEWI01263366 [CEWI] marine metagenome genome assembly TARA_111_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 27196 27125 - SeC TCA [ENA] ¢þ
>WENV170539165 CEWR01153751 [CEWR] marine metagenome genome assembly TARA_085_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 26225 26296 + SeC TCA [ENA] ¢þ
>WENV170935632 MDTG01260379 [MDTG] marine metagenome; seawater 6813 6884 + SeC TCA [ENA] ¢þ
>SRA1015381 SRR023846.37846 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 261 190 - SeC TCA [SRA]
Identical group No.429748 (1 seq.)
>SRA1015127 SRR023845.469943 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 170 99 - SeC TCA [SRA]
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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