tRNA genes clustered and arranged according to each identical group

Compost metagenome contig00001

Anticodon = CAA

HIT: 27 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.110825 (1 seq.)
>ENV09003575 ADGO01094103 Compost metagenome contig00001 270 185 - Leu CAA [ENA] ¡û
Identical group No.110827 (1 seq.)
>ENV09003637 ADGO01116474 Compost metagenome contig00001 398 483 + Leu CAA [ENA] ¡û
Identical group No.130558 (4 seq.)
>W1711168556 LVYD01000078 Bacteroidota Niastella vici [LVYD] 106 22 - Leu CAA [ENA] ¡û
>W1711171985 LWBP01000220 Bacteroidota Niastella populi [LWBP] 21907 21821 - Leu CAA [ENA] ¡û
>WENV180037911 FVAA012001362 [FVAA] soil metagenome; Soil 116 32 - Leu CAA [ENA] ¢þ
>ENV09003068 ADGO01003204 Compost metagenome contig00001 1212 1126 - Leu CAA [ENA] ¡û
Identical group No.134895 (3 seq.)
>ENV09003360 ADGO01024303 Compost metagenome contig00001 1827 1741 - Leu CAA [ENA] ¡û
>ENV09003465 ADGO01049976 Compost metagenome contig00001 95 9 - Leu CAA [ENA] ¡û
>C161038378 CP011971 Gammaproteobacteria Steroidobacter denitrificans DSM 18526 [CP011971] 1452308 1452394 + Leu CAA [Ensembl] ¡û
Identical group No.151364 (1 seq.)
>ENV09003004 ADGO01001225 Compost metagenome contig00001 311 227 - Leu CAA [ENA] ¡û
Identical group No.151365 (1 seq.)
>ENV09003018 ADGO01001647 Compost metagenome contig00001 267 183 - Leu CAA [ENA] ¡û
Identical group No.151374 (1 seq.)
>ENV09003259 ADGO01014025 Compost metagenome contig00001 942 1028 + Leu CAA [ENA] ¡û
Identical group No.151377 (1 seq.)
>ENV09003346 ADGO01022325 Compost metagenome contig00001 141 227 + Leu CAA [ENA] ¡û
Identical group No.151380 (1 seq.)
>ENV09003444 ADGO01044645 Compost metagenome contig00001 137 54 - Leu CAA [ENA] ¡û
Identical group No.151381 (1 seq.)
>ENV09003477 ADGO01060384 Compost metagenome contig00001 2 88 + Leu CAA [ENA] ¡û
Identical group No.151389 (1 seq.)
>ENV09003788 ADGO01176307 Compost metagenome contig00001 48 134 + Leu CAA [ENA] ¡û
Identical group No.151393 (1 seq.)
>ENV09003804 ADGO01181272 Compost metagenome contig00001 174 260 + Leu CAA [ENA] ¡û
Identical group No.151394 (1 seq.)
>ENV09003844 ADGO01192304 Compost metagenome contig00001 434 348 - Leu CAA [ENA] ¡û
Identical group No.178466 (1 seq.)
>ENV09003394 ADGO01030821 Compost metagenome contig00001 182 97 - Leu CAA [ENA] ¡û
Identical group No.178476 (1 seq.)
>ENV09003883 ADGO01203006 Compost metagenome contig00001 50 135 + Leu CAA [ENA] ¡û
Identical group No.186937 (4 seq.)
>WENV170329711 CESV01153564 [CESV] marine metagenome genome assembly TARA_100_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 281 197 - Leu CAA [ENA] ¢þ
>WENV170524125 CEWG01398356 [CEWG] marine metagenome genome assembly TARA_102_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1 85 + Leu CAA [ENA] ¢þ
>WENV170927346 MDTG01115724 [MDTG] marine metagenome; seawater 5730 5814 + Leu CAA [ENA] ¢þ
>ENV09003112 ADGO01005408 Compost metagenome contig00001 833 917 + Leu CAA [ENA] ¡û
Identical group No.215876 (1 seq.)
>ENV09002994 ADGO01000715 Compost metagenome contig00001 553 470 - Leu CAA [ENA] ¡û
Identical group No.215879 (1 seq.)
>ENV09003091 ADGO01004394 Compost metagenome contig00001 1993 1909 - Leu CAA [ENA] ¡û
Identical group No.215890 (1 seq.)
>ENV09003547 ADGO01083036 Compost metagenome contig00001 374 293 - Leu CAA [ENA] ¡û
Identical group No.215894 (1 seq.)
>ENV09003887 ADGO01203325 Compost metagenome contig00001 100 181 + Leu CAA [ENA] ¡û
Identical group No.227898 (1 seq.)
>ENV09003786 ADGO01174988 Compost metagenome contig00001 197 280 + Leu CAA [ENA] ¡û
Identical group No.232227 (1 seq.)
>ENV09002968 ADGO01000473 Compost metagenome contig00001 160 241 + Leu CAA [ENA] ¡û
Identical group No.240239 (1 seq.)
>ENV09003437 ADGO01042676 Compost metagenome contig00001 84 8 - Leu CAA [ENA] ¡û
Identical group No.441337 (1 seq.)
>ENV09003184 ADGO01009451 Compost metagenome contig00001 1041 1117 + Leu CAA [ENA] ¡û
Identical group No.441373 (1 seq.)
>ENV09003606 ADGO01102619 Compost metagenome contig00001 281 357 + Leu CAA [ENA] ¡û
Identical group No.441421 (1 seq.)
>ENV09003923 ADGO01216850 Compost metagenome contig00001 164 90 - Leu CAA [ENA] ¡û
Identical group No.641843 (1 seq.)
>ENV09003791 ADGO01177291 Compost metagenome contig00001 289 364 + Leu CAA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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