tRNA genes clustered and arranged according to each identical group

Compost metagenome contig00001

Anticodon = CGT

HIT: 15 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.441326 (1 seq.)
>ENV09003099 ADGO01004856 Compost metagenome contig00001 3812 3736 - Thr CGT [ENA] ¡û
Identical group No.441351 (1 seq.)
>ENV09003392 ADGO01029907 Compost metagenome contig00001 424 498 + Thr CGT [ENA] ¡û
Identical group No.491625 (10 seq.)
>C015256 CP000127 Gammaproteobacteria Nitrosococcus oceani ATCC 19707 [CP000127] 2170549 2170474 - Thr CGT [Ensembl] ¡û
>WENV180282692 OBIC01001386 [OBIC] beach sand metagenome; beach sand 2120 2045 - Thr CGT [ENA] ¢þ
>WENV180309519 OBJS01004266 [OBJS] beach sand metagenome; beach sand 723 648 - Thr CGT [ENA] ¢þ
>W08011078 ABSG01000019 Gammaproteobacteria Nitrosococcus oceani C-27 [ABSG] 145756 145684 - Thr CGT [ENA] ¡û
>WENV170646269 JQGG01104510 [JQGG] wastewater metagenome; domestic wastewater sediment treated with nitrate and nitrite at 100mg /litre each 84 9 - Thr CGT [ENA] ¢þ
>W141802323 JPFN01000076 Gammaproteobacteria Nitrosococcus oceani [JPFN] 995 920 - Thr CGT [ENA] ¡û
>W141803318 JPGN01000061 Gammaproteobacteria Nitrosococcus oceani C-27 [JPGN] 18790 18715 - Thr CGT [ENA] ¡û
>W1810305965 PTQZ01000272 Gammaproteobacteria Amnimonas aquatica HR-E [PTQZ] 134 59 - Thr CGT [ENA] ¡û
>ENV09003843 ADGO01192252 Compost metagenome contig00001 213 288 + Thr CGT [ENA] ¡û
>C10109944 CP002086 Gammaproteobacteria Nitrosococcus watsonii C-113 [CP002086] 1858433 1858358 - Thr CGT [Ensembl] ¡û
Identical group No.522977 (2 seq.)
>WENV170650076 JRYD01009450 [JRYD] activated sludge metagenome; activated biomass in a lab-scale reactor treating industrial wastewater at 2 ppm DO 4356 4281 - Thr CGT [ENA] ¢þ
>ENV09003352 ADGO01023448 Compost metagenome contig00001 1321 1246 - Thr CGT [ENA] ¡û
Identical group No.641732 (1 seq.)
>ENV09003026 ADGO01001866 Compost metagenome contig00001 414 339 - Thr CGT [ENA] ¡û
Identical group No.641753 (1 seq.)
>ENV09003283 ADGO01015845 Compost metagenome contig00001 352 424 + Thr CGT [ENA] ¡û
Identical group No.641756 (1 seq.)
>ENV09003293 ADGO01016994 Compost metagenome contig00001 222 147 - Thr CGT [ENA] ¡û
Identical group No.641762 (1 seq.)
>ENV09003359 ADGO01024256 Compost metagenome contig00001 257 332 + Thr CGT [ENA] ¡û
Identical group No.641819 (1 seq.)
>ENV09003662 ADGO01124490 Compost metagenome contig00001 79 152 + Thr CGT [ENA] ¡û
Identical group No.641842 (1 seq.)
>ENV09003790 ADGO01176598 Compost metagenome contig00001 19 94 + Thr CGT [ENA] ¡û
Identical group No.641852 (1 seq.)
>ENV09003836 ADGO01191196 Compost metagenome contig00001 240 315 + Thr CGT [ENA] ¡û
Identical group No.772200 (1 seq.)
>ENV09003106 ADGO01005115 Compost metagenome contig00001 330 402 + Thr CGT [ENA] ¡û
Identical group No.772213 (1 seq.)
>ENV09003358 ADGO01024143 Compost metagenome contig00001 56 130 + Thr CGT [ENA] ¡û
Identical group No.772233 (1 seq.)
>ENV09003494 ADGO01066969 Compost metagenome contig00001 166 240 + Thr CGT [ENA] ¡û
Identical group No.772244 (1 seq.)
>ENV09003741 ADGO01163561 Compost metagenome contig00001 106 178 + Thr CGT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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