tRNA genes clustered and arranged according to each identical group

Compost metagenome contig00001

Anticodon = CTG

HIT: 15 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.641801 (1 seq.)
>ENV09003581 ADGO01095286 Compost metagenome contig00001 486 414 - Gln CTG [ENA] ¡û
Identical group No.641824 (1 seq.)
>ENV09003698 ADGO01140609 Compost metagenome contig00001 27 101 + Gln CTG [ENA] ¡û
Identical group No.678657 (35 seq.)
>W1710857000 LLZU01000002 Actinomycetota Wenjunlia vitaminophila vitaminophilus [LLZU] 4158 4230 + Gln CTG [ENA] ¡û
>W131166385 ARCK01000043 Actinomycetota Wenjunlia vitaminophila DSM 41686 [ARCK] 5857 5929 + Gln CTG [ENA] ¡û
>W1711792247 MWJN01000002 Actinomycetota Microbispora sp. GKU 823 [MWJN] 198154 198082 - Gln CTG [ENA] ¡û
>WENV180694257 OCZS012129106 [OCZS] soil metagenome; soil 90 162 + Gln CTG [ENA] ¢þ
>WENV181166144 OEIS01499337 [OEIS] soil metagenome; soil 132 60 - Gln CTG [ENA] ¢þ
>WENV181172221 OEIV010547465 [OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 149 221 + Gln CTG [ENA] ¢þ
>W141135810 AWEV01000266 Actinomycetota Microbispora sp. ATCC PTA-5024 [AWEV] 63974 64046 + Gln CTG [ENA] ¡û
>C181198620 CP031264 Actinomycetota Peterkaempfera bronchialis DSM 106435 [CP031264] 4793018 4793090 + Gln CTG - ¡û
>C181198624 CP031264 Actinomycetota Peterkaempfera bronchialis DSM 106435 [CP031264] 4793444 4793516 + Gln CTG - ¡û
>W141759639 JNZM01000600 Actinomycetota Microbispora rosea subsp. rosea [JNZM] 1110 1182 + Gln CTG [ENA] ¡û
>W141759844 JNZQ01000002 Actinomycetota Microbispora rosea subsp. nonnitritogenes [JNZQ] 214550 214478 - Gln CTG [ENA] ¡û
>W1910548107 FZOH01000001 Actinomycetota Geodermatophilus saharensis DSM 45423 [FZOH] 761833 761905 + Gln CTG [ENA] ¡û
>W1810594507 QFZU02000025 Actinomycetota Microbispora triticiradicis NEAU-HRDPA2-9 [QFZU] 20076 20148 + Gln CTG [ENA] ¡û
>W1810609376 QGTX01000001 Actinomycetota Geodermatophilus normandii DSM 45417 [QGTX] 2379276 2379348 + Gln CTG [ENA] ¡û
>W1810676840 QKMH01000001 Actinomycetota Geodermatophilus sp. DSM 44511 [QKMH] 105326 105254 - Gln CTG [ENA] ¡û
>W1810733359 QOHF01000004 Actinomycetota Geodermatophilus sp. TF02-6 [QOHF] 159417 159489 + Gln CTG [ENA] ¡û
>W1810915019 QVQH01000027 Actinomycetota Geodermatophilus sp. LHW52908 [QVQH] 23686 23614 - Gln CTG [ENA] ¡û
>ENV09003299 ADGO01017749 Compost metagenome contig00001 490 562 + Gln CTG [ENA] ¡û
>W1610050954 BBGI01000912 Actinomycetota Sphaerimonospora mesophila NBRC 14179 = JCM 3151 [BBGI] 806 734 - Gln CTG [ENA] ¡û
>W1610060603 BCBX01000033 Actinomycetota Microbispora sp. GMKU363 [BCBX] 203381 203453 + Gln CTG [ENA] ¡û
>W1610068455 BCRI01000238 Actinomycetota Sphaerimonospora mesophila NBRC 14179 = JCM 3151 [BCRI] 1378 1306 - Gln CTG [ENA] ¡û
>W1610633355 LIQR01000045 Actinomycetota Peterkaempfera griseoplana griseoplanus [LIQR] 11356 11282 - Gln CTG [ENA] ¡û
>W1610633359 LIQR01000045 Actinomycetota Peterkaempfera griseoplana griseoplanus [LIQR] 10928 10854 - Gln CTG [ENA] ¡û
>W1610719381 LLZU01000002 Actinomycetota Wenjunlia vitaminophila vitaminophilus [LLZU] 4158 4230 + Gln CTG [ENA] ¡û
>W1710047353 BBGI01000912 Actinomycetota Sphaerimonospora mesophila NBRC 14179 = JCM 3151 [BBGI] 806 734 - Gln CTG [ENA] ¡û
>W1710057858 BCBX01000033 Actinomycetota Microbispora sp. GMKU363 [BCBX] 203381 203453 + Gln CTG [ENA] ¡û
>W1710065828 BCRI01000238 Actinomycetota Sphaerimonospora mesophila NBRC 14179 = JCM 3151 [BCRI] 1378 1306 - Gln CTG [ENA] ¡û
>W1710531050 FNPH01000002 Actinomycetota Micromonospora pattaloongensis [FNPH] 728086 728012 - Gln CTG [ENA] ¡û
>W1710571778 FOWE01000007 Actinomycetota Geodermatophilus obscurus [FOWE] 69170 69096 - Gln CTG [ENA] ¡û
>W1710577741 FPBA01000009 Actinomycetota Geodermatophilus amargosae [FPBA] 106240 106166 - Gln CTG [ENA] ¡û
>W1710584891 FQVX01000003 Actinomycetota Geodermatophilus nigrescens [FQVX] 1020450 1020524 + Gln CTG [ENA] ¡û
>W1710592740 FRCS01000001 Actinomycetota Cryptosporangium aurantiacum [FRCS] 293440 293512 + Gln CTG [ENA] ¡û
>W1710597638 FTNI01000014 Actinomycetota Microbispora rosea [FTNI] 162230 162302 + Gln CTG [ENA] ¡û
>W1710767787 LIQR01000045 Actinomycetota Peterkaempfera griseoplana griseoplanus [LIQR] 11356 11282 - Gln CTG [ENA] ¡û
>W1710767791 LIQR01000045 Actinomycetota Peterkaempfera griseoplana griseoplanus [LIQR] 10928 10854 - Gln CTG [ENA] ¡û
Identical group No.772191 (2 seq.)
>WENV170574018 FLYL01067753 [FLYL] hot springs metagenome; Sediment 120 46 - Gln CTG [ENA] ¢þ
>ENV09003006 ADGO01001415 Compost metagenome contig00001 426 352 - Gln CTG [ENA] ¡û
Identical group No.772198 (1 seq.)
>ENV09003097 ADGO01004747 Compost metagenome contig00001 4416 4490 + Gln CTG [ENA] ¡û
Identical group No.772235 (1 seq.)
>ENV09003546 ADGO01082961 Compost metagenome contig00001 389 317 - Gln CTG [ENA] ¡û
Identical group No.780194 (3 seq.)
>W1710888412 LMZS01000109 Chloroflexota Chloroflexi bacterium OLB15 [LMZS] 27403 27476 + Gln CTG [ENA] ¡û
>ENV09003590 ADGO01096810 Compost metagenome contig00001 215 145 - Gln CTG [ENA] ¡û
>W1610748790 LMZS01000109 Chloroflexota Chloroflexi bacterium OLB15 [LMZS] 27403 27476 + Gln CTG [ENA] ¡û
Identical group No.782532 (9 seq.)
>C018820 CP000686 Chloroflexota Roseiflexus sp. RS-1 [CP000686] 2020620 2020547 - Gln CTG [Ensembl] ¡û
>w019851 AAUM01000021 Chloroflexota Roseiflexus castenholzii DSM 13941 [AAUM] 1965 1895 - Gln CTG [ENA] ¡û
>WENV180014646 FQKF010078412 [FQKF] soil metagenome; Soil 108 35 - Gln CTG [ENA] ¢þ
>C08008095 CP000804 Chloroflexota Roseiflexus castenholzii DSM 13941 [CP000804] 3677058 3677131 + Gln CTG [Ensembl] ¡û
>WENV170000778 AFSR01004233 [AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs 527 454 - Gln CTG [ENA] ¢þ
>WENV170574615 FLYN01001148 [FLYN] hot springs metagenome; Sediment 37704 37631 - Gln CTG [ENA] ¢þ
>W09105837 AAQU01000002 Chloroflexota Roseiflexus sp. RS-1 [AAQU] 231479 231552 + Gln CTG [ENA] ¡û
>ENV09003484 ADGO01062509 Compost metagenome contig00001 187 260 + Gln CTG [ENA] ¡û
>WENV11101121 AFSR01004233 [AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs 527 454 - Gln CTG [ENA] ¡û
Identical group No.784002 (20 seq.)
>W1710791406 LJNS01000015 Gammaproteobacteria Gammaproteobacteria bacterium SG8_30 [LJNS] 34635 34708 + Gln CTG [ENA] ¡û
>WENV180027170 FTIX01000063 [FTIX] metagenome; soil 3917 3990 + Gln CTG [ENA] ¢þ
>WENV180297325 OBJA01022179 [OBJA] soil metagenome; sediment, water from around vicinity 1360 1287 - Gln CTG [ENA] ¢þ
>WENV181165086 OEIR01574358 [OEIR] soil metagenome; soil 122 195 + Gln CTG [ENA] ¢þ
>WENV181166651 OEIU01000996 [OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 5382 5309 - Gln CTG [ENA] ¢þ
>WENV181367265 OFPX01000567 [OFPX] freshwater metagenome; Freshwater Lake 193 266 + Gln CTG [ENA] ¢þ
>WENV181369226 OFQO01012987 [OFQO] freshwater metagenome; Freshwater Lake 171 244 + Gln CTG [ENA] ¢þ
>WENV183702688 PDVI01023407 [PDVI] alkali sediment metagenome; glacial lake sediment 76 3 - Gln CTG [ENA] ¢þ
>WENV183702982 PDVJ01001296 [PDVJ] alkali sediment metagenome; glacial lake sediment 2022 1949 - Gln CTG [ENA] ¢þ
>WENV183703514 PDVJ01019625 [PDVJ] alkali sediment metagenome; glacial lake sediment 1241 1314 + Gln CTG [ENA] ¢þ
>WENV170646163 JQGG01004303 [JQGG] wastewater metagenome; domestic wastewater sediment treated with nitrate and nitrite at 100mg /litre each 211 138 - Gln CTG [ENA] ¢þ
>WENV170650056 JRYD01007688 [JRYD] activated sludge metagenome; activated biomass in a lab-scale reactor treating industrial wastewater at 2 ppm DO 402 329 - Gln CTG [ENA] ¢þ
>WENV170662363 JXWW01046553 [JXWW] soil metagenome; rice field; organic GM Plot 518 591 + Gln CTG [ENA] ¢þ
>WENV170706193 LNAP01001621 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 23002 22929 - Gln CTG [ENA] ¢þ
>ENV09000125 ABSN01014781 Freshwater sediment metagenome lwFormaldehyde_C1 541 468 - Gln CTG [ENA] ¡û
>ENV09003108 ADGO01005246 Compost metagenome contig00001 113 40 - Gln CTG [ENA] ¡û
>ENV09003406 ADGO01032655 Compost metagenome contig00001 400 473 + Gln CTG [ENA] ¡û
>W11178647 AGFD01000001 Gammaproteobacteria Thiorhodospira sibirica ATCC 700588 [AGFD] 14111 14038 - Gln CTG [ENA] ¡û
>C161038377 CP011971 Gammaproteobacteria Steroidobacter denitrificans DSM 18526 [CP011971] 1349063 1349136 + Gln CTG [Ensembl] ¡û
>W1610655331 LJNS01000015 Gammaproteobacteria Gammaproteobacteria bacterium SG8_30 [LJNS] 34635 34708 + Gln CTG [ENA] ¡û
Identical group No.810683 (3 seq.)
>WENV180247260 OBEQ010010750 [OBEQ] groundwater metagenome; groundwater 3052 3125 + Gln CTG [ENA] ¢þ
>WENV180636162 OCRE01073434 [OCRE] marine metagenome; Seawater 141 68 - Gln CTG [ENA] ¢þ
>ENV09003753 ADGO01167514 Compost metagenome contig00001 274 201 - Gln CTG [ENA] ¡û
Identical group No.834020 (1 seq.)
>ENV09003085 ADGO01004378 Compost metagenome contig00001 35 108 + Gln CTG [ENA] ¡û
Identical group No.834024 (1 seq.)
>ENV09003176 ADGO01008877 Compost metagenome contig00001 124 51 - Gln CTG [ENA] ¡û
Identical group No.834031 (1 seq.)
>ENV09003311 ADGO01018810 Compost metagenome contig00001 910 982 + Gln CTG [ENA] ¡û
Identical group No.834043 (1 seq.)
>ENV09003607 ADGO01102744 Compost metagenome contig00001 169 242 + Gln CTG [ENA] ¡û
Identical group No.834055 (1 seq.)
>ENV09003870 ADGO01200797 Compost metagenome contig00001 300 373 + Gln CTG [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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