tRNA genes clustered and arranged according to each identical group

Compost metagenome contig00001

Anticodon = GGA

HIT: 15 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.8070 (1 seq.)
>ENV09003813 ADGO01183144 Compost metagenome contig00001 40 134 + Ser GGA [ENA] ¡û
Identical group No.25464 (2 seq.)
>ENV09003384 ADGO01028851 Compost metagenome contig00001 1175 1266 + Ser GGA [ENA] ¡û
>C161038386 CP011971 Gammaproteobacteria Steroidobacter denitrificans DSM 18526 [CP011971] 1978025 1978116 + Ser GGA [Ensembl] ¡û
Identical group No.29699 (1 seq.)
>ENV09003351 ADGO01023419 Compost metagenome contig00001 34 125 + Ser GGA [ENA] ¡û
Identical group No.29701 (1 seq.)
>ENV09003706 ADGO01143884 Compost metagenome contig00001 317 226 - Ser GGA [ENA] ¡û
Identical group No.44768 (1 seq.)
>ENV09003341 ADGO01021900 Compost metagenome contig00001 166 76 - Ser GGA [ENA] ¡û
Identical group No.44769 (1 seq.)
>ENV09003651 ADGO01120723 Compost metagenome contig00001 500 410 - Ser GGA [ENA] ¡û
Identical group No.44772 (1 seq.)
>ENV09003758 ADGO01168825 Compost metagenome contig00001 96 186 + Ser GGA [ENA] ¡û
Identical group No.71229 (1 seq.)
>ENV09002998 ADGO01000825 Compost metagenome contig00001 230 143 - Ser GGA [ENA] ¡û
Identical group No.71230 (1 seq.)
>ENV09003009 ADGO01001421 Compost metagenome contig00001 2782 2871 + Ser GGA [ENA] ¡û
Identical group No.71231 (1 seq.)
>ENV09003017 ADGO01001647 Compost metagenome contig00001 431 344 - Ser GGA [ENA] ¡û
Identical group No.71232 (1 seq.)
>ENV09003083 ADGO01004168 Compost metagenome contig00001 438 527 + Ser GGA [ENA] ¡û
Identical group No.71242 (1 seq.)
>ENV09003715 ADGO01152279 Compost metagenome contig00001 322 409 + Ser GGA [ENA] ¡û
Identical group No.86016 (1 seq.)
>ENV09003560 ADGO01088299 Compost metagenome contig00001 196 284 + Ser GGA [ENA] ¡û
Identical group No.86017 (1 seq.)
>ENV09003584 ADGO01095286 Compost metagenome contig00001 149 63 - Ser GGA [ENA] ¡û
Identical group No.91641 (7 seq.)
>WENV180094464 MTBK01008403 [MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge 3583 3496 - Ser GGA [ENA] ¢þ
>WENV180291134 OBIV01011190 [OBIV] soil metagenome; Clay 203 289 + Ser GGA [ENA] ¢þ
>WENV180343901 OBLK01136444 [OBLK] soil metagenome; Clay 328 240 - Ser GGA [ENA] ¢þ
>WENV180690814 OCZS010026981 [OCZS] soil metagenome; soil 1694 1781 + Ser GGA [ENA] ¢þ
>WENV181297967 OFHL01009665 [OFHL] soil metagenome; Clay 783 698 - Ser GGA [ENA] ¢þ
>WENV170558529 CXWL01076538 [CXWL] groundwater metagenome; biofilm material 181 94 - Ser GGA [ENA] ¢þ
>ENV09003700 ADGO01141109 Compost metagenome contig00001 117 32 - Ser GGA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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