tRNA genes clustered and arranged according to each identical group

Compost metagenome contig00001

Anticodon = GGG

HIT: 16 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.240240 (1 seq.)
>ENV09003550 ADGO01084431 Compost metagenome contig00001 479 404 - Pro GGG [ENA] ¡û
Identical group No.245063 (6 seq.)
>W1710893277 LNEO01000249 Unclassified Deltaproteobacteria bacterium Ga0077539 [LNEO] 23349 23426 + Pro GGG [ENA] ¡û
>WENV180693914 OCZS011750199 [OCZS] soil metagenome; soil 170 93 - Pro GGG [ENA] ¢þ
>WENV183687617 ORMF011169205 [ORMF] groundwater metagenome; groundwater 503 427 - Pro GGG [ENA] ¢þ
>WENV170710118 LNFM01001175 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 65666 65589 - Pro GGG [ENA] ¢þ
>ENV09003648 ADGO01119606 Compost metagenome contig00001 68 142 + Pro GGG [ENA] ¡û
>W1610753543 LNEO01000249 Unclassified Deltaproteobacteria bacterium Ga0077539 [LNEO] 23349 23426 + Pro GGG [ENA] ¡û
Identical group No.247228 (2 seq.)
>WENV170562764 CZCB01005164 [CZCB] anaerobic digester metagenome; anaerobic digester 13350 13273 - Pro GGG [ENA] ¢þ
>ENV09003799 ADGO01179802 Compost metagenome contig00001 350 273 - Pro GGG [ENA] ¡û
Identical group No.268747 (1 seq.)
>ENV09003866 ADGO01197683 Compost metagenome contig00001 96 21 - Pro GGG [ENA] ¡û
Identical group No.309134 (9 seq.)
>WENV180291493 OBIV01068057 [OBIV] soil metagenome; Clay 188 261 + Pro GGG [ENA] ¢þ
>WENV180343713 OBLK01066793 [OBLK] soil metagenome; Clay 356 283 - Pro GGG [ENA] ¢þ
>WENV180690530 OCZS010009694 [OCZS] soil metagenome; soil 2645 2719 + Pro GGG [ENA] ¢þ
>WENV181123087 OEFO01086805 [OEFO] soil metagenome; soil 173 99 - Pro GGG [ENA] ¢þ
>WENV181164264 OEIR01085601 [OEIR] soil metagenome; soil 264 190 - Pro GGG [ENA] ¢þ
>WENV181165767 OEIS01161456 [OEIS] soil metagenome; soil 104 178 + Pro GGG [ENA] ¢þ
>WENV181298513 OFHL01124782 [OFHL] soil metagenome; Clay 224 151 - Pro GGG [ENA] ¢þ
>WENV170652168 JRYG01159194 [JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated 95 21 - Pro GGG [ENA] ¢þ
>ENV09003206 ADGO01010412 Compost metagenome contig00001 218 292 + Pro GGG [ENA] ¡û
Identical group No.309358 (5 seq.)
>WENV180250547 OBEQ010293982 [OBEQ] groundwater metagenome; groundwater 79 3 - Pro GGG [ENA] ¢þ
>WENV180292669 OBIV01562040 [OBIV] soil metagenome; Clay 111 187 + Pro GGG [ENA] ¢þ
>WENV181155607 OEID01284027 [OEID] soil metagenome; soil 185 109 - Pro GGG [ENA] ¢þ
>WENV183724494 PJQE01022072 [PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane 875 799 - Pro GGG [ENA] ¢þ
>ENV09003019 ADGO01001736 Compost metagenome contig00001 2718 2642 - Pro GGG [ENA] ¡û
Identical group No.310669 (9 seq.)
>WENV180695275 OCZS013255671 [OCZS] soil metagenome; soil 127 51 - Pro GGG [ENA] ¢þ
>WENV181192163 OEPS010441235 [OEPS] soil metagenome; soil 111 35 - Pro GGG [ENA] ¢þ
>WENV181221706 OFCW01002584 [OFCW] microbial mat metagenome; Microbial Mat 978 902 - Pro GGG [ENA] ¢þ
>WENV181296032 OFHJ01004819 [OFHJ] soil metagenome; Clay 691 767 + Pro GGG [ENA] ¢þ
>WENV181407191 OGCG01009581 [OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA 1375 1451 + Pro GGG [ENA] ¢þ
>W1810605143 QGNA01000003 Alphaproteobacteria Falsiroseomonas bella CQN31 [QGNA] 384209 384133 - Pro GGG [ENA] ¡û
>W1810692346 QLIX01000025 Alphaproteobacteria Roseicella frigidaeris DB-1506 [QLIX] 31327 31251 - Pro GGG [ENA] ¡û
>W1810700595 QMDI01000013 Alphaproteobacteria Elioraea thermophila YIM 72297 [QMDI] 40794 40718 - Pro GGG [ENA] ¡û
>ENV09003130 ADGO01006209 Compost metagenome contig00001 313 237 - Pro GGG [ENA] ¡û
Identical group No.354107 (2 seq.)
>WENV180298181 OBJA01209673 [OBJA] soil metagenome; sediment, water from around vicinity 154 80 - Pro GGG [ENA] ¢þ
>ENV09003573 ADGO01093309 Compost metagenome contig00001 86 10 - Pro GGG [ENA] ¡û
Identical group No.359722 (7 seq.)
>WENV181145048 OEHO01173519 [OEHO] metagenome; unknown 137 61 - Pro GGG [ENA] ¢þ
>WENV181155593 OEID01273929 [OEID] soil metagenome; soil 99 175 + Pro GGG [ENA] ¢þ
>W1910640205 LSRW01000064 Gammaproteobacteria Steroidobacter cummioxidans 35Y [LSRW] 33298 33222 - Pro GGG [ENA] ¡û
>ENV09003404 ADGO01032481 Compost metagenome contig00001 682 606 - Pro GGG [ENA] ¡û
>ENV09003531 ADGO01079240 Compost metagenome contig00001 894 970 + Pro GGG [ENA] ¡û
>ENV09003548 ADGO01083235 Compost metagenome contig00001 196 272 + Pro GGG [ENA] ¡û
>WENV077454 AAFX01041016 Soil microbial communities from Minnesota Farm 415 337 - Pro GGG [ENA]
Identical group No.373244 (3 seq.)
>W1711573328 MNCZ01000033 Gammaproteobacteria Gammaproteobacteria bacterium 13_2_20CM_66_19 [MNCZ] 12578 12654 + Pro GGG [ENA] ¡û
>WENV180591913 OCOV01135823 [OCOV] marine metagenome; ENVO:01000301 277 353 + Pro GGG [ENA] ¢þ
>ENV09003617 ADGO01106989 Compost metagenome contig00001 360 284 - Pro GGG [ENA] ¡û
Identical group No.422021 (2 seq.)
>W1911189737 NQWI01000009 Chloroflexota Candidatus Viridilinea mediisalina mediisalina Kir15-3F [NQWI] 62963 62887 - Pro GGG [ENA] ¡û
>ENV09003417 ADGO01036684 Compost metagenome contig00001 1050 974 - Pro GGG [ENA] ¡û
Identical group No.441316 (1 seq.)
>ENV09003025 ADGO01001863 Compost metagenome contig00001 101 27 - Pro GGG [ENA] ¡û
Identical group No.441320 (1 seq.)
>ENV09003065 ADGO01003140 Compost metagenome contig00001 5393 5469 + Pro GGG [ENA] ¡û
Identical group No.441336 (1 seq.)
>ENV09003181 ADGO01009163 Compost metagenome contig00001 176 252 + Pro GGG [ENA] ¡û
Identical group No.441338 (1 seq.)
>ENV09003192 ADGO01009694 Compost metagenome contig00001 194 270 + Pro GGG [ENA] ¡û
Identical group No.441405 (1 seq.)
>ENV09003826 ADGO01188012 Compost metagenome contig00001 502 426 - Pro GGG [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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