tRNA genes clustered and arranged according to each identical group

Compost metagenome contig00001

Anticodon = TCT

HIT: 22 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.336704 (5 seq.)
>W1910004411 AVCZ01000007 Bacillota Ureibacillus massiliensis 4400831 = CIP 108448 = CCUG 49529 [AVCZ] 25310 25235 - Arg TCT [ENA] ¡û
>W1911495147 OBMQ01000003 Bacillota Ureibacillus xyleni JC22 [OBMQ] 122502 122427 - Arg TCT [ENA] ¡û
>W1911495513 OBQC01000002 Bacillota Ureibacillus acetophenoni JC23 [OBQC] 380331 380256 - Arg TCT [ENA] ¡û
>ENV09003454 ADGO01046000 Compost metagenome contig00001 167 91 - Arg TCT [ENA] ¡û
>W1511316159 JPVQ01000007 Bacillota Ureibacillus massiliensis 4400831 = CIP 108448 = CCUG 49529 [JPVQ] 25310 25235 - Arg TCT [ENA] ¡û
Identical group No.378668 (7 seq.)
>WENV183729209 PJTQ01011369 [PJTQ] soil metagenome; Soil (3) enriched on wood chips 1049 975 - Arg TCT [ENA] ¢þ
>WENV183734611 PJTZ01024981 [PJTZ] soil metagenome; Soil enriched (2) on filter paper 44 118 + Arg TCT [ENA] ¢þ
>WENV183737813 PJUD01036001 [PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment 607 533 - Arg TCT [ENA] ¢þ
>WENV183740820 PJUF01011885 [PJUF] feces metagenome; Chicken feces (3) enriched on wood chips 1438 1512 + Arg TCT [ENA] ¢þ
>WENV183741057 PJUF01032540 [PJUF] feces metagenome; Chicken feces (3) enriched on wood chips 403 477 + Arg TCT [ENA] ¢þ
>W1810692616 QLKR01000001 Bacteroidota Niabella yanshanensis HAMBI_3031 [QLKR] 876889 876815 - Arg TCT [ENA] ¡û
>ENV09003498 ADGO01067981 Compost metagenome contig00001 273 349 + Arg TCT [ENA] ¡û
Identical group No.396938 (2 seq.)
>WENV170003184 AGTN01252191 [AGTN] bioreactor metagenome; poplar biomass 268 341 + Arg TCT [ENA] ¢þ
>ENV09003318 ADGO01019824 Compost metagenome contig00001 429 353 - Arg TCT [ENA] ¡û
Identical group No.407270 (7 seq.)
>W1710882258 LMTR01000083 Alphaproteobacteria Hyphomicrobium sulfonivorans [LMTR] 40016 40092 + Arg TCT [ENA] ¡û
>WENV180690081 OCZB010521190 [OCZB] metagenome; Oyster Gut Contents 9 85 + Arg TCT [ENA] ¢þ
>WENV170652330 JRYH01000935 [JRYH] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater generated at dyes and 25815 25739 - Arg TCT [ENA] ¢þ
>WENV170655591 JTFN01049001 [JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating 299 375 + Arg TCT [ENA] ¢þ
>WENV170655619 JTFN01053096 [JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating 300 376 + Arg TCT [ENA] ¢þ
>ENV09003456 ADGO01046257 Compost metagenome contig00001 297 221 - Arg TCT [ENA] ¡û
>W1610744184 LMTR01000083 Alphaproteobacteria Hyphomicrobium sulfonivorans [LMTR] 40016 40092 + Arg TCT [ENA] ¡û
Identical group No.441315 (1 seq.)
>ENV09003015 ADGO01001491 Compost metagenome contig00001 306 380 + Arg TCT [ENA] ¡û
Identical group No.441317 (1 seq.)
>ENV09003053 ADGO01002630 Compost metagenome contig00001 309 233 - Arg TCT [ENA] ¡û
Identical group No.441343 (1 seq.)
>ENV09003266 ADGO01014471 Compost metagenome contig00001 746 672 - Arg TCT [ENA] ¡û
Identical group No.441344 (1 seq.)
>ENV09003272 ADGO01015407 Compost metagenome contig00001 101 177 + Arg TCT [ENA] ¡û
Identical group No.441345 (1 seq.)
>ENV09003276 ADGO01015410 Compost metagenome contig00001 73 -1 - Arg TCT [ENA] ¡û
Identical group No.441353 (1 seq.)
>ENV09003420 ADGO01037442 Compost metagenome contig00001 59 135 + Arg TCT [ENA] ¡û
Identical group No.441364 (1 seq.)
>ENV09003519 ADGO01078771 Compost metagenome contig00001 1 77 + Arg TCT [ENA] ¡û
Identical group No.441375 (1 seq.)
>ENV09003614 ADGO01106044 Compost metagenome contig00001 270 197 - Arg TCT [ENA] ¡û
Identical group No.441389 (1 seq.)
>ENV09003699 ADGO01140992 Compost metagenome contig00001 253 177 - Arg TCT [ENA] ¡û
Identical group No.441398 (2 seq.)
>ENV09003782 ADGO01173081 Compost metagenome contig00001 25 101 + Arg TCT [ENA] ¡û
>ENV09003864 ADGO01197171 Compost metagenome contig00001 25 101 + Arg TCT [ENA] ¡û
Identical group No.441410 (1 seq.)
>ENV09003874 ADGO01201148 Compost metagenome contig00001 224 150 - Arg TCT [ENA] ¡û
Identical group No.641734 (1 seq.)
>ENV09003075 ADGO01003595 Compost metagenome contig00001 42 117 + Arg TCT [ENA] ¡û
Identical group No.641751 (1 seq.)
>ENV09003260 ADGO01014033 Compost metagenome contig00001 407 334 - Arg TCT [ENA] ¡û
Identical group No.641763 (2 seq.)
>ENV09003374 ADGO01027072 Compost metagenome contig00001 451 376 - Arg TCT [ENA] ¡û
>ENV09003375 ADGO01027073 Compost metagenome contig00001 695 620 - Arg TCT [ENA] ¡û
Identical group No.641844 (1 seq.)
>ENV09003794 ADGO01178490 Compost metagenome contig00001 403 478 + Arg TCT [ENA] ¡û
Identical group No.641847 (1 seq.)
>ENV09003812 ADGO01182699 Compost metagenome contig00001 125 200 + Arg TCT [ENA] ¡û
Identical group No.641861 (1 seq.)
>ENV09003892 ADGO01204827 Compost metagenome contig00001 138 213 + Arg TCT [ENA] ¡û
Identical group No.641863 (1 seq.)
>ENV09003917 ADGO01212896 Compost metagenome contig00001 83 8 - Arg TCT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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