tRNA genes clustered and arranged according to each identical group

Cryptophyta

Anticodon = GAA

HIT: 2 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.462879 (2 seq.)
>WENV181852504 OGWF01031520 [OGWF] freshwater metagenome; freshwater 248 176 - Phe GAA [ENA]
>CHL090100270 AF041468 Cryptophyta Guillardia theta 3316 3388 + Phe GAA [ENA]
Identical group No.474686 (30 seq.)
>WENV180209249 OBAK01049341 [OBAK] marine metagenome; ENVO.00002150 76 1 - Phe GAA [ENA]
>WENV180367524 OBOE01132983 [OBOE] marine metagenome; ENVO:00002010 34 107 + Phe GAA [ENA]
>WENV180377672 OBON01076645 [OBON] marine metagenome; sea water 145 219 + Phe GAA [ENA]
>WENV180596041 OCPG01027904 [OCPG] marine metagenome; ENVO.00002110 298 372 + Phe GAA [ENA]
>WENV182589542 OJID01011581 [OJID] seawater metagenome; Sea water 446 520 + Phe GAA [ENA]
>WENV170274570 CERM01025925 [CERM] marine metagenome genome assembly TARA_067_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 5730 5804 + Phe GAA [ENA]
>WENV170275323 CERM01079866 [CERM] marine metagenome genome assembly TARA_067_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1048 974 - Phe GAA [ENA]
>WENV170286433 CERW01091763 [CERW] marine metagenome genome assembly TARA_066_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 254 180 - Phe GAA [ENA]
>WENV170297443 CESE01148944 [CESE] marine metagenome genome assembly TARA_085_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1379 1453 + Phe GAA [ENA]
>WENV170307719 CESJ01285721 [CESJ] marine metagenome genome assembly TARA_084_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1679 1605 - Phe GAA [ENA]
>WENV170326223 CEST01154231 [CEST] marine metagenome genome assembly TARA_085_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 412 338 - Phe GAA [ENA]
>WENV170441289 CEUV01154529 [CEUV] marine metagenome genome assembly TARA_123_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1986 2060 + Phe GAA [ENA]
>WENV170489995 CEVP01159722 [CEVP] marine metagenome genome assembly TARA_150_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3 77 + Phe GAA [ENA]
>WENV170499832 CEVT01199747 [CEVT] marine metagenome genome assembly TARA_150_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 82 156 + Phe GAA [ENA]
>WENV170516597 CEWB01177040 [CEWB] marine metagenome genome assembly TARA_068_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 552 626 + Phe GAA [ENA]
>WENV170520547 CEWE01528288 [CEWE] marine metagenome genome assembly TARA_124_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 82 156 + Phe GAA [ENA]
>WENV170532763 CEWO01067618 [CEWO] marine metagenome genome assembly TARA_145_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2874 2800 - Phe GAA [ENA]
>WENV170536097 CEWP01149674 [CEWP] marine metagenome genome assembly TARA_067_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 311 383 + Phe GAA [ENA]
>WENV170807572 MDSW01100728 [MDSW] marine metagenome; seawater 3326 3400 + Phe GAA [ENA]
>WENV170809970 MDSW01141095 [MDSW] marine metagenome; seawater 397 323 - Phe GAA [ENA]
>WENV170811914 MDSW01174670 [MDSW] marine metagenome; seawater 5314 5388 + Phe GAA [ENA]
>WENV170814926 MDSX01001479 [MDSX] marine metagenome; seawater 88 14 - Phe GAA [ENA]
>WENV170815640 MDSX01013967 [MDSX] marine metagenome; seawater 4 78 + Phe GAA [ENA]
>WENV170816428 MDSX01030293 [MDSX] marine metagenome; seawater 4675 4601 - Phe GAA [ENA]
>WENV170817440 MDSX01050524 [MDSX] marine metagenome; seawater 6344 6416 + Phe GAA [ENA]
>WENV170817496 MDSX01051645 [MDSX] marine metagenome; seawater 2344 2418 + Phe GAA [ENA]
>WENV170819775 MDSX01099167 [MDSX] marine metagenome; seawater 3284 3358 + Phe GAA [ENA]
>WENV170899211 MDTD01136420 [MDTD] marine metagenome; seawater 15596 15522 - Phe GAA [ENA]
>WENV170918937 MDTF01004635 [MDTF] marine metagenome; seawater 11490 11416 - Phe GAA [ENA]
>CHL090103025 EF508371 Cryptophyta Rhodomonas salina 3402 3474 + Phe GAA [ENA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK