tRNA genes clustered and arranged according to each identical group

Cyanobacteria

Anticodon = TCC

HIT: 6 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.673334 (5 seq.)
>PL171000126 AP018211 Cyanobacteria Calothrix brevissima NIES-22 plasmid:plasmid4 170646 170574 - Gly TCC [ENA]
>PL171000181 AP018237 Cyanobacteria Fremyella diplosiphon NIES-3275 plasmid:plasmid04 102523 102595 + Gly TCC [ENA]
>W1610003575 AGCR01000096 Gammaproteobacteria Tolypothrix sp. PCC 7601 (AGCR) 608 680 + Gly TCC [ENA]
>C131010331 CP003943 Cyanobacteria Calothrix sp. PCC 7507 5193449 5193377 - Gly TCC [Ensembl]
>W1710004195 AGCR01000096 Gammaproteobacteria Tolypothrix sp. PCC 7601 (AGCR) 608 680 + Gly TCC [ENA]
Identical group No.786963 (34 seq.)
>W131036267 ALVJ01000038 Cyanobacteria Calothrix sp. PCC 7103 [ALVJ] 611716 611646 - Gly TCC [ENA]
>W1711666651 MRCD01000129 Cyanobacteria Calothrix sp. HK-06 (MRCD) 10044 9974 - Gly TCC [ENA]
>PL171000188 AP018274 Cyanobacteria Calothrix sp. NIES-4101 plasmid:plasmid1 1646731 1646801 + Gly TCC [ENA]
>C025177 BA000022 Cyanobacteria Synechocystis sp. PCC 6803 1704238 1704308 + Gly TCC [Ensembl]
>W141051304 AMZV01000023 Cyanobacteria Synechocystis sp. PCC 6714 [AMZV] 212096 212166 + Gly TCC [ENA]
>W08008930 ABLR01000004 Cyanobacteria Cyanothece sp. PCC 8801 [ABLR] 302408 302478 + Gly TCC [ENA]
>W08011490 ABVI01000002 Cyanobacteria Cyanothece sp. PCC 8802 [ABVI] 178479 178409 - Gly TCC [ENA]
>W141260252 CBZS010000058 Cyanobacteria Richelia intracellularis [CBZS] 17234 17306 + Gly TCC [ENA]
>C181004899 AP018254 Cyanobacteria Calothrix sp. NIES-3974 (AP018254) 5672267 5672197 - Gly TCC -
>C181004936 AP018255 Cyanobacteria Calothrix sp. NIES-4071 (AP018255) 9161125 9161055 - Gly TCC -
>C181004987 AP018280 Cyanobacteria Calothrix sp. NIES-4101 (AP018280) 5589186 5589116 - Gly TCC -
>C181160835 CP028094 Cyanobacteria Synechocystis sp. IPPAS B-1465 (CP028094) 1703055 1703125 + Gly TCC -
>C191001483 AP018341 Cyanobacteria cyanobacterium endosymbiont of Rhopalodia gibberula (AP018341) 389194 389124 - Gly TCC -
>W141805243 JPKF01000001 Cyanobacteria Calothrix sp. 336/3 [JPKF] 2900530 2900600 + Gly TCC [ENA]
>W1910018053 BDQK01000003 Cyanobacteria Aphanothece sacrum FPU1 (BDQK) 112739 112809 + Gly TCC [ENA]
>W1910018121 BDQL01000090 Cyanobacteria Aphanothece sacrum FPU3 (BDQL) 23845 23915 + Gly TCC [ENA]
>C09103612 CP001287 Cyanobacteria Cyanothece sp. PCC 8801 816869 816939 + Gly TCC [Ensembl]
>W1910502545 FYBH01000394 Cyanobacteria Calothrix rhizosoleniae SC01 (FYBH) 15840 15770 - Gly TCC [ENA]
>W1911278525 NTFS01000045 Cyanobacteria Calothrix elsteri CCALA 953 (NTFS) 4717 4647 - Gly TCC [ENA]
>W1810069174 PEBC01000011 Cyanobacteria Cyanobacterium aponinum B-1201 (PEBC) 19710 19640 - Gly TCC [ENA]
>C151000970 AP012549 Cyanobacteria cyanobacterium endosymbiont of Epithemia turgida isolate EtSB Lake 457370 457300 - Gly TCC [Ensembl]
>C151027468 CP007542 Cyanobacteria Synechocystis sp. PCC 6714 1983915 1983845 - Gly TCC [Ensembl]
>C151081776 CP011382 Cyanobacteria Calothrix sp. 336/3 2892984 2893054 + Gly TCC [Ensembl]
>C10104704 CP001701 Cyanobacteria Cyanothece sp. PCC 8802 816667 816737 + Gly TCC [Ensembl]
>C11122288 AP012205 Cyanobacteria Synechocystis sp. PCC 6803 GT-S 1703055 1703125 + Gly TCC [Ensembl]
>C121000598 AP012276 Cyanobacteria Synechocystis sp. PCC 6803 substr. GT-I 1703157 1703227 + Gly TCC [Ensembl]
>C121000637 AP012277 Cyanobacteria Synechocystis sp. PCC 6803 substr. PCC-N 1703254 1703324 + Gly TCC [Ensembl]
>C121000676 AP012278 Cyanobacteria Synechocystis sp. PCC 6803 substr. PCC-P 1703266 1703336 + Gly TCC [Ensembl]
>C161046047 CP012832 Cyanobacteria Synechocystis sp. PCC 6803 substrain GT-G 1703311 1703381 + Gly TCC -
>C131000629 AP012495 Firmicutes Bacillus subtilis BEST7613 3078245 3078315 + Gly TCC [Ensembl]
>C131002593 CP003265 Cyanobacteria Synechocystis sp. PCC 6803 (Moscow wildtype genome) 1702707 1702777 + Gly TCC -
>C131004713 CP003610 Cyanobacteria Calothrix sp. PCC 6303 6272469 6272399 - Gly TCC [Ensembl]
>C131010509 CP003947 Cyanobacteria Cyanobacterium aponinum PCC 10605 933385 933315 - Gly TCC [Ensembl]
>W1710005660 ALVQ01000011 Firmicutes Spirulina major PCC 6313 (ALVQ) 2211023 2210953 - Gly TCC [ENA]
Identical group No.788893 (5 seq.)
>W1711711313 MTAV01000014 Cyanobacteria Nostoc sp. T09 (MTAV) 89942 89871 - Gly TCC [ENA]
>W1711711394 MTAW01000169 Cyanobacteria Nostoc sp. 106C (MTAW) 18294 18365 + Gly TCC [ENA]
>W1711711457 MTAX01000103 Cyanobacteria Nostoc sp. RF31Y (MTAX) 25138 25211 + Gly TCC [ENA]
>PL191000018 AP018321 Cyanobacteria Nostoc sp. HK-01 NIES-2109 plasmid:phage/plasmid primase, P4 family protein (AP018321) 74471 74542 + Gly TCC [ENA]
>C181004798 AP018172 Cyanobacteria Calothrix sp. NIES-2098 (AP018172) 1808945 1808872 - Gly TCC -
Identical group No.798662 (15 seq.)
>PL191000529 CP026690 Cyanobacteria Nostoc sp. 'Peltigera membranacea cyanobiont' N6 plasmid:chromosome/plasmid partitioning protein ParA (CP026690) 20122 20052 - Gly TCC [ENA]
>W1910596238 LAGX01000061 Cyanobacteria Nostoc linckia z1 (LAGX) 27232 27302 + Gly TCC [ENA]
>W1910596322 LAGY01000063 Cyanobacteria Nostoc linckia z2 (LAGY) 27233 27303 + Gly TCC [ENA]
>W1910596403 LAGZ01000060 Cyanobacteria Nostoc linckia z3 (LAGZ) 27233 27303 + Gly TCC [ENA]
>W1910596485 LAHA01000057 Cyanobacteria Nostoc linckia z4 (LAHA) 27231 27301 + Gly TCC [ENA]
>W1910596565 LAHB01000058 Cyanobacteria Nostoc linckia z6 (LAHB) 27224 27294 + Gly TCC [ENA]
>W1910596636 LAHC01000058 Cyanobacteria Nostoc linckia z7 (LAHC) 25040 24970 - Gly TCC [ENA]
>W1910596713 LAHD01000046 Cyanobacteria Nostoc linckia z8 (LAHD) 27231 27301 + Gly TCC [ENA]
>W1910596781 LAHE01000039 Cyanobacteria Nostoc linckia z9 (LAHE) 28413 28483 + Gly TCC [ENA]
>W1910596857 LAHF01000026 Cyanobacteria Nostoc linckia z13 (LAHF) 27215 27285 + Gly TCC [ENA]
>W1910596969 LAHG01000043 Cyanobacteria Nostoc linckia z14 (LAHG) 27453 27523 + Gly TCC [ENA]
>W1910597015 LAHH01000019 Cyanobacteria Nostoc linckia z15 (LAHH) 29136 29206 + Gly TCC [ENA]
>W1910597140 LAHI01000051 Cyanobacteria Nostoc linckia z16 (LAHI) 27216 27286 + Gly TCC [ENA]
>W1910597236 LAHJ01000049 Cyanobacteria Nostoc linckia z18 (LAHJ) 56853 56923 + Gly TCC [ENA]
>W1911118842 NOLK01000100 Cyanobacteria Nostoc sp. 'Peltigera membranacea cyanobiont' 232 (NOLK) 20514 20584 + Gly TCC [ENA]
Identical group No.806334 (7 seq.)
>W1711335772 MBRD01000008 Cyanobacteria Nostoc sp. MBR 210 (MBRD) 496613 496684 + Gly TCC [ENA]
>PL171000021 AP003604 Cyanobacteria Nostoc sp. PCC 7120 plasmid:pCC7120delta 50390 50319 - Gly TCC [Ensembl]
>PL171000110 AP018191 Cyanobacteria Nostoc sp. NIES-2111 plasmid:plasmid7 23128 23199 + Gly TCC [ENA]
>PL171000143 AP018220 Cyanobacteria Anabaena variabilis NIES-23 plasmid:plasmid4 5754 5825 + Gly TCC [ENA]
>C191001261 AP018318 Cyanobacteria Nostoc sp. HK-01 NIES-2109 (AP018318) 4728133 4728204 + Gly TCC -
>C161038895 CP012036 Cyanobacteria Nostoc piscinale CENA21 3705220 3705291 + Gly TCC [Ensembl]
>W1611066479 MBRD01000008 Cyanobacteria Nostoc sp. MBR 210 (MBRD) 496613 496684 + Gly TCC [ENA]
Identical group No.826328 (1 seq.)
>PL171000168 AP018231 Cyanobacteria Calothrix parasitica NIES-267 plasmid:plasmid4 2775 2705 - Gly TCC [ENA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK