tRNA genes clustered and arranged according to each identical group

Diversity of active microbial communities in surface seawaters along a north-south transect in the South Pacific Ocean (SRP001207)

Anticodon = CAT

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.274129 (128 seq.)
>W1711175191 LWEP01000041 Alphaproteobacteria Sulfitobacter sp. HI0021 HI0021 [LWEP] 4257 4333 + Met CAT [ENA] ¡û
>W1711175278 LWER01000010 Alphaproteobacteria Sulfitobacter sp. HI0027 HI0027 [LWER] 6041 5965 - Met CAT [ENA] ¡û
>W1711176106 LWFD01000554 Alphaproteobacteria Sulfitobacter sp. HI0054 [LWFD] 37282 37358 + Met CAT [ENA] ¡û
>W1711176893 LWFQ01000610 Alphaproteobacteria Sulfitobacter sp. HI0076 HI0076 [LWFQ] 3584 3660 + Met CAT [ENA] ¡û
>W1711177198 LWFW01001480 Alphaproteobacteria Sulfitobacter sp. HI0082 HI0082 [LWFW] 19690 19614 - Met CAT [ENA] ¡û
>W1711229402 LXYK01000005 Alphaproteobacteria Sulfitobacter pontiacus [LXYK] 68608 68684 + Met CAT [ENA] ¡û
>W1711229507 LXYM01000043 Alphaproteobacteria Sulfitobacter geojensis [LXYM] 93431 93355 - Met CAT [ENA] ¡û
>w011978 AALZ01000001 Alphaproteobacteria Sulfitobacter sp. NAS-14.1 [AALZ] 381921 381843 - Met CAT [ENA] ¡û
>w011774 AALV01000001 Alphaproteobacteria Sulfitobacter sp. EE-36 [AALV] 438632 438554 - Met CAT [ENA] ¡û
>WENV180051851 MPLU02248326 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 1829 1753 - Met CAT [ENA] ¢þ
>WENV180070474 MPLZ02169633 [MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter 630 554 - Met CAT [ENA] ¢þ
>W141171325 AXZR01000008 Alphaproteobacteria Sulfitobacter pontiacus 3SOLIMAR09 [AXZR] 69030 68954 - Met CAT [ENA] ¡û
>W08005739 ABID01000001 Alphaproteobacteria Sulfitobacter indolifex HEL-45 [ABID] 640406 640333 - Met CAT [ENA] ¡û
>W08011144 ABSH01000044 Alphaproteobacteria Octadecabacter antarcticus 307 [ABSH] 133345 133272 - Met CAT [ENA] ¡û
>W08011226 ABSK01000021 Alphaproteobacteria Octadecabacter arcticus 238 [ABSK] 12605 12681 + Met CAT [ENA] ¡û
>WENV182540796 OJAP01009921 [OJAP] seawater metagenome; Sea water 57 133 + Met CAT [ENA] ¢þ
>WENV182541843 OJAU01007245 [OJAU] seawater metagenome; Sea water 1253 1177 - Met CAT [ENA] ¢þ
>WENV182542499 OJAY01004757 [OJAY] seawater metagenome; Sea water 662 738 + Met CAT [ENA] ¢þ
>WENV182543027 OJAZ01017435 [OJAZ] seawater metagenome; Sea water 553 629 + Met CAT [ENA] ¢þ
>WENV182543564 OJBB01004852 [OJBB] seawater metagenome; Sea water 67 143 + Met CAT [ENA] ¢þ
>WENV182543878 OJBD01000411 [OJBD] seawater metagenome; Sea water 1686 1610 - Met CAT [ENA] ¢þ
>WENV182544097 OJBE01000363 [OJBE] seawater metagenome; Sea water 5095 5171 + Met CAT [ENA] ¢þ
>WENV182546065 OJBO01000650 [OJBO] seawater metagenome; Sea water 7282 7358 + Met CAT [ENA] ¢þ
>WENV182546735 OJBP01001736 [OJBP] seawater metagenome; Sea water 4010 4086 + Met CAT [ENA] ¢þ
>WENV182547152 OJBR01002526 [OJBR] seawater metagenome; Sea water 434 510 + Met CAT [ENA] ¢þ
>WENV182548004 OJBU01012167 [OJBU] seawater metagenome; Sea water 395 471 + Met CAT [ENA] ¢þ
>WENV182549644 OJBY01004611 [OJBY] seawater metagenome; Sea water 514 590 + Met CAT [ENA] ¢þ
>WENV182549921 OJBZ01000431 [OJBZ] seawater metagenome; Sea water 1155 1231 + Met CAT [ENA] ¢þ
>WENV182555265 OJCY01026788 [OJCY] seawater metagenome; Sea water 271 195 - Met CAT [ENA] ¢þ
>WENV182555438 OJDA01000690 [OJDA] seawater metagenome; Sea water 2648 2572 - Met CAT [ENA] ¢þ
>WENV182555802 OJDD01000990 [OJDD] seawater metagenome; Sea water 1550 1626 + Met CAT [ENA] ¢þ
>WENV182556015 OJDF01002132 [OJDF] seawater metagenome; Sea water 1141 1217 + Met CAT [ENA] ¢þ
>WENV182557640 OJDK01001015 [OJDK] seawater metagenome; Sea water 2740 2816 + Met CAT [ENA] ¢þ
>WENV182559772 OJDQ01003858 [OJDQ] seawater metagenome; Sea water 659 735 + Met CAT [ENA] ¢þ
>WENV182560834 OJDV01000030 [OJDV] seawater metagenome; Sea water 95323 95247 - Met CAT [ENA] ¢þ
>WENV182562490 OJDZ01004687 [OJDZ] seawater metagenome; Sea water 565 641 + Met CAT [ENA] ¢þ
>WENV182563924 OJED01003061 [OJED] seawater metagenome; Sea water 261 185 - Met CAT [ENA] ¢þ
>WENV182567067 OJEN01001220 [OJEN] seawater metagenome; Sea water 2298 2222 - Met CAT [ENA] ¢þ
>WENV182574960 OJFS01011678 [OJFS] seawater metagenome; Sea water 793 717 - Met CAT [ENA] ¢þ
>WENV182576369 OJFX01015334 [OJFX] seawater metagenome; Sea water 83 159 + Met CAT [ENA] ¢þ
>WENV182580982 OJGW01042492 [OJGW] seawater metagenome; Sea water 352 428 + Met CAT [ENA] ¢þ
>WENV182581495 OJGX01009537 [OJGX] seawater metagenome; Sea water 1049 1125 + Met CAT [ENA] ¢þ
>WENV182583727 OJHE01000691 [OJHE] seawater metagenome; Sea water 2322 2246 - Met CAT [ENA] ¢þ
>WENV182584713 OJHG01006070 [OJHG] seawater metagenome; Sea water 322 398 + Met CAT [ENA] ¢þ
>WENV182585372 OJHH01013470 [OJHH] seawater metagenome; Sea water 195 119 - Met CAT [ENA] ¢þ
>WENV182586044 OJHJ01000431 [OJHJ] seawater metagenome; Sea water 8377 8453 + Met CAT [ENA] ¢þ
>WENV182587416 OJHM01004540 [OJHM] seawater metagenome; Sea water 227 303 + Met CAT [ENA] ¢þ
>WENV182588058 OJHO01001768 [OJHO] seawater metagenome; Sea water 4917 4841 - Met CAT [ENA] ¢þ
>WENV182592009 OJIO01041355 [OJIO] seawater metagenome; Sea water 162 86 - Met CAT [ENA] ¢þ
>WENV182592788 OJIR01027670 [OJIR] seawater metagenome; Sea water 606 530 - Met CAT [ENA] ¢þ
>W141284724 JAMC01000001 Alphaproteobacteria Sulfitobacter donghicola DSW-25 = KCTC 12864 = JCM 14565 [JAMC] 670323 670399 + Met CAT [ENA] ¡û
>W141290113 JASC01000013 Alphaproteobacteria Sulfitobacter noctilucae NB-68 [JASC] 93366 93290 - Met CAT [ENA] ¡û
>W141290179 JASD01000008 Alphaproteobacteria Sulfitobacter noctilucicola NB-77 [JASD] 491258 491182 - Met CAT [ENA] ¡û
>W141290187 JASE01000005 Alphaproteobacteria Sulfitobacter geojensis MM-124 [JASE] 853769 853845 + Met CAT [ENA] ¡û
>W141290230 JASF01000005 Alphaproteobacteria Sulfitobacter donghicola DSW-25 = KCTC 12864 = JCM 14565 [JASF] 1772281 1772357 + Met CAT [ENA] ¡û
>W141290322 JASH01000006 Alphaproteobacteria Sulfitobacter mediterraneus KCTC 32188 [JASH] 114044 113968 - Met CAT [ENA] ¡û
>WENV183057151 OLHK01005815 [OLHK] seawater metagenome; Sea water 1136 1212 + Met CAT [ENA] ¢þ
>WENV183057497 OLHL01004159 [OLHL] seawater metagenome; Sea water 1872 1948 + Met CAT [ENA] ¢þ
>WENV183059787 OLHV01004456 [OLHV] seawater metagenome; Sea water 616 692 + Met CAT [ENA] ¢þ
>WENV183615626 OOEB01064606 [OOEB] marine metagenome; sea ice 283 207 - Met CAT [ENA] ¢þ
>WENV183616089 OOEC01056068 [OOEC] marine metagenome; sea ice 290 366 + Met CAT [ENA] ¢þ
>WENV183616934 OOEE01013933 [OOEE] marine metagenome; sea ice 223 147 - Met CAT [ENA] ¢þ
>WENV183621363 OOFT01071602 [OOFT] marine metagenome; sea ice 210 134 - Met CAT [ENA] ¢þ
>WENV183621652 OOFU01023246 [OOFU] marine metagenome; sea ice 616 692 + Met CAT [ENA] ¢þ
>WENV183624449 OOGD01012048 [OOGD] marine metagenome; sea ice 1045 969 - Met CAT [ENA] ¢þ
>WENV183628550 OOGO01000967 [OOGO] marine metagenome; sea ice 3488 3564 + Met CAT [ENA] ¢þ
>WENV183631413 OOGU01106449 [OOGU] marine metagenome; sea ice 438 513 + Met CAT [ENA] ¢þ
>WENV170121334 CENL01112853 [CENL] marine metagenome genome assembly TARA_025_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 216 292 + Met CAT [ENA] ¢þ
>WENV170130895 CENR01062381 [CENR] marine metagenome genome assembly TARA_018_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 856 780 - Met CAT [ENA] ¢þ
>WENV170131039 CENS01005424 [CENS] marine metagenome genome assembly TARA_022_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 952 1028 + Met CAT [ENA] ¢þ
>WENV170155663 CEOG01086873 [CEOG] marine metagenome genome assembly TARA_034_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 737 813 + Met CAT [ENA] ¢þ
>WENV170228613 CEQG01025382 [CEQG] marine metagenome genome assembly TARA_076_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 102 178 + Met CAT [ENA] ¢þ
>WENV170255865 CEQX01029915 [CEQX] marine metagenome genome assembly TARA_070_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1110 1034 - Met CAT [ENA] ¢þ
>WENV170264561 CERD01045260 [CERD] marine metagenome genome assembly TARA_070_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 209 133 - Met CAT [ENA] ¢þ
>WENV170266606 CERE01091783 [CERE] marine metagenome genome assembly TARA_070_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1641 1717 + Met CAT [ENA] ¢þ
>WENV170269344 CERH01102511 [CERH] marine metagenome genome assembly TARA_072_MES_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 378 302 - Met CAT [ENA] ¢þ
>WENV170276566 CERN01068835 [CERN] marine metagenome genome assembly TARA_066_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 402 326 - Met CAT [ENA] ¢þ
>WENV170276921 CERO01074248 [CERO] marine metagenome genome assembly TARA_068_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 280 356 + Met CAT [ENA] ¢þ
>WENV170294768 CESC01155959 [CESC] marine metagenome genome assembly TARA_078_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 60 136 + Met CAT [ENA] ¢þ
>WENV170307998 CESK01042055 [CESK] marine metagenome genome assembly TARA_078_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1056 1132 + Met CAT [ENA] ¢þ
>WENV170347911 CETG01170904 [CETG] marine metagenome genome assembly TARA_122_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 933 857 - Met CAT [ENA] ¢þ
>WENV170456434 CEVA01203983 [CEVA] marine metagenome genome assembly TARA_125_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 391 315 - Met CAT [ENA] ¢þ
>WENV170475991 CEVI01058129 [CEVI] marine metagenome genome assembly TARA_142_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 835 911 + Met CAT [ENA] ¢þ
>WENV170488362 CEVO01188573 [CEVO] marine metagenome genome assembly TARA_152_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 496 420 - Met CAT [ENA] ¢þ
>WENV170520708 CEWF01001100 [CEWF] marine metagenome genome assembly TARA_122_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 966 890 - Met CAT [ENA] ¢þ
>WENV170537233 CEWQ01033009 [CEWQ] marine metagenome genome assembly TARA_085_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 753 829 + Met CAT [ENA] ¢þ
>WENV170579371 FUFK010038801 [FUFK] metagenome; unknown 243823 243899 + Met CAT [ENA] ¢þ
>WENV170672383 LAZR01000094 [LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment 59953 60029 + Met CAT [ENA] ¢þ
>WENV170672863 LAZR01002793 [LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment 4657 4733 + Met CAT [ENA] ¢þ
>WENV170759191 LUMS01005599 [LUMS] marine metagenome; Red Sea water column Station 192 - depth 25m 812 736 - Met CAT [ENA] ¢þ
>WENV170762714 LUMW01030373 [LUMW] marine metagenome; Red Sea water column Station 192 - depth 500m 93 17 - Met CAT [ENA] ¢þ
>WENV170783009 MAAC01012792 [MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days 9360 9436 + Met CAT [ENA] ¢þ
>WENV170947484 MEHZ010654855 [MEHZ] marine metagenome; marine surface water 131 55 - Met CAT [ENA] ¢þ
>C181123315 CP025803 Alphaproteobacteria Sulfitobacter sp. SK011 [CP025803] 3834023 3833947 - Met CAT - ¡û
>C181123332 CP025804 Alphaproteobacteria Sulfitobacter sp. SK012 [CP025804] 522611 522687 + Met CAT - ¡û
>C181123392 CP025808 Alphaproteobacteria Sulfitobacter sp. SK025 [CP025808] 2967028 2966952 - Met CAT - ¡û
>C191018043 CP020694 Alphaproteobacteria Sulfitobacter sp. D7 [CP020694] 3121297 3121221 - Met CAT - ¡û
>C191182607 CP040753 Alphaproteobacteria Sulfitobacter sp. BSw21498 [CP040753] 3008838 3008914 + Met CAT - ¡û
>W141807884 JPOY01000001 Alphaproteobacteria Sulfitobacter sp. CB2047 [JPOY] 81023 81099 + Met CAT [ENA] ¡û
>W09112280 ABXS01000046 Alphaproteobacteria Roseobacter sp. GAI101 [ABXS] 656583 656659 + Met CAT [ENA] ¡û
>W09132737 ACOA01000003 Alphaproteobacteria Thalassobium sp. R2A62 R2A62 [ACOA] 1063453 1063377 - Met CAT [ENA] ¡û
>W1910443089 FWFT01000005 Alphaproteobacteria Pseudooctadecabacter jejudonensis CECT 8397 [FWFT] 121931 121855 - Met CAT [ENA] ¡û
>W1910499709 FXYD01000005 Alphaproteobacteria Octadecabacter ascidiaceicola CECT 8868 [FXYD] 76387 76311 - Met CAT [ENA] ¡û
>W1910814120 MVIP01000010 Alphaproteobacteria Sulfitobacter pontiacus SAORIC-395 [MVIP] 44497 44573 + Met CAT [ENA] ¡û
>W1910814143 MVIQ01000002 Alphaproteobacteria Sulfitobacter indolifex SAORIC-263 [MVIQ] 52801 52725 - Met CAT [ENA] ¡û
>W1911539365 OMPT01000009 Alphaproteobacteria Sulfitobacter mediterraneus EL44 [OMPT] 634172 634248 + Met CAT [ENA] ¡û
>W1810424123 PYUG01000001 Alphaproteobacteria Sulfitobacter sp. CB-A [PYUG] 81023 81099 + Met CAT [ENA] ¡û
>W1810425777 PYVI01000002 Gammaproteobacteria Alloalcanivorax venustensis G9-1 [PYVI] 3114 3038 - Met CAT [ENA] ¡û
>W1810504297 QBKU01000001 Alphaproteobacteria Sulfitobacter mediterraneus DSM 12244 [QBKU] 105286 105210 - Met CAT [ENA] ¡û
>W1810532412 QCYG01000003 Alphaproteobacteria Thalassorhabdomicrobium marinisediminis BH-SD16 [QCYG] 163529 163605 + Met CAT [ENA] ¡û
>SRA1016564 SRR027217.1931 Diversity of active microbial communities in surface seawaters along a north-south transect in the South Pacific Ocean (SRP001207) 142 218 + Met CAT [SRA]
>C151092042 CP012160 Alphaproteobacteria Octadecabacter temperatus SB1 [CP012160] 2764230 2764306 + Met CAT - ¡û
>SRA1051732 SRR035098.65187 454 Sequencing (SRP001819) 154 230 + Met CAT [SRA]
>C131005956 CP003740 Alphaproteobacteria Octadecabacter antarcticus 307 [CP003740] 573784 573708 - Met CAT [Ensembl] ¡û
>C131005975 CP003742 Alphaproteobacteria Octadecabacter arcticus 238 [CP003742] 3850654 3850730 + Met CAT [Ensembl] ¡û
>W1610983504 LWEP01000041 Alphaproteobacteria Sulfitobacter sp. HI0021 HI0021 [LWEP] 4257 4333 + Met CAT [ENA] ¡û
>W1610983591 LWER01000010 Alphaproteobacteria Sulfitobacter sp. HI0027 HI0027 [LWER] 6041 5965 - Met CAT [ENA] ¡û
>W1610984419 LWFD01000554 Alphaproteobacteria Sulfitobacter sp. HI0054 [LWFD] 37282 37358 + Met CAT [ENA] ¡û
>W1610985206 LWFQ01000610 Alphaproteobacteria Sulfitobacter sp. HI0076 HI0076 [LWFQ] 3584 3660 + Met CAT [ENA] ¡û
>W1610985511 LWFW01001480 Alphaproteobacteria Sulfitobacter sp. HI0082 HI0082 [LWFW] 19690 19614 - Met CAT [ENA] ¡û
>W1611013272 LXYK01000005 Alphaproteobacteria Sulfitobacter pontiacus [LXYK] 68608 68684 + Met CAT [ENA] ¡û
>W1611013377 LXYM01000043 Alphaproteobacteria Sulfitobacter geojensis [LXYM] 93431 93355 - Met CAT [ENA] ¡û
>W1710515164 FNBP01000001 Alphaproteobacteria Sulfitobacter delicatus [FNBP] 119606 119530 - Met CAT [ENA] ¡û
>W1710524950 FNJD01000002 Alphaproteobacteria Sulfitobacter litoralis [FNJD] 56087 56163 + Met CAT [ENA] ¡û
>W1710528272 FNNB01000008 Alphaproteobacteria Sulfitobacter pontiacus [FNNB] 69390 69314 - Met CAT [ENA] ¡û
>W1710562871 FOPG01000002 Alphaproteobacteria Sulfitobacter dubius [FOPG] 50819 50743 - Met CAT [ENA] ¡û
>W1710576952 FPAJ01000007 Alphaproteobacteria Sulfitobacter marinus [FPAJ] 53023 53099 + Met CAT [ENA] ¡û
>W1710594958 FSRP01000002 Alphaproteobacteria Octadecabacter temperatus [FSRP] 784014 783938 - Met CAT [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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