This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
Euglenozoa
Anticodon = ACG
HIT:
8 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.352281 (2 seq.)
>CHL1830000293
JQ237893
Euglenozoa
Euglena viridis NJ001 (JQ237893)
84259
84332
+
Arg
ACG
[ENA]
¡û
>CHL090200168
X70810
Euglenozoa
Euglena gracilis
102679
102606
-
Arg
ACG
[ENA]
¡û
Identical group No.370855 (1 seq.)
>CHL1830000474
KC684276
Euglenozoa
Euglenaformis proxima SAG 1224-11a (KC684276)
78366
78293
-
Arg
ACG
[ENA]
¡û
Identical group No.388467 (1 seq.)
>CHL1830000863
KP410781
Euglenozoa
Cryptoglena skujai SAG 10.88 (KP410781)
26266
26193
-
Arg
ACG
[ENA]
¡û
Identical group No.406249 (1 seq.)
>CHL1810017561
KP453743
Euglenozoa
Euglenaria anabaena UTEX 373 (KP453743)
21827
21754
-
Arg
ACG
[ENA]
¡û
Identical group No.406314 (1 seq.)
>CHL1830000896
KP939040
Euglenozoa
Euglena archaeoplastidiata Michigan (KP939040)
22992
22919
-
Arg
ACG
[ENA]
¡û
Identical group No.414356 (1 seq.)
>CHL1810017682
KP686077
Euglenozoa
Trachelomonas volvocina UTEX 1327 (KP686077)
59559
59632
+
Arg
ACG
[ENA]
¡û
Identical group No.414401 (3 seq.)
>CHL1830000109
FJ968740
Viridiplantae
Pedinomonas minor (FJ968740)
85462
85535
+
Arg
ACG
[ENA]
¡û
>CHL1830000334
JX457480
Euglenozoa
Monomorphina aenigmatica UTEX1284 (JX457480)
15524
15451
-
Arg
ACG
[ENA]
¡û
>CHL1830000869
KP455987
Euglenozoa
Monomorphina parapyrum UTEX 2354 (KP455987)
18120
18047
-
Arg
ACG
[ENA]
¡û
Identical group No.447087 (1 seq.)
>CHL090100438
AJ294725
Euglenozoa
Euglena longa
64169
64094
-
Arg
ACG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK