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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Euglenozoa
Anticodon = CAA
HIT:
10 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.170156 (1 seq.)
>CHL1810017500
KP410781
Euglenozoa
Cryptoglena skujai SAG 10.88 (KP410781)
101457
101373
-
Leu
CAA
[ENA]
¡û
Identical group No.208234 (1 seq.)
>CHL1810018203
KP939040
Euglenozoa
Euglena archaeoplastidiata Michigan (KP939040)
111
194
+
Leu
CAA
[ENA]
¡û
Identical group No.217848 (1 seq.)
>CHL1810005342
JQ237893
Euglenozoa
Euglena viridis NJ001 (JQ237893)
1850
1769
-
Leu
CAA
[ENA]
¡û
Identical group No.225770 (1 seq.)
>CHL1810017564
KP453743
Euglenozoa
Euglenaria anabaena UTEX 373 (KP453743)
111
31
-
Leu
CAA
[ENA]
¡û
Identical group No.230730 (1 seq.)
>CHL1810008846
KC684276
Euglenozoa
Euglenaformis proxima SAG 1224-11a (KC684276)
9306
9225
-
Leu
CAA
[ENA]
¡û
Identical group No.232029 (1 seq.)
>CHL1810006188
JX457480
Euglenozoa
Monomorphina aenigmatica UTEX1284 (JX457480)
872
790
-
Leu
CAA
[ENA]
¡û
Identical group No.232340 (1 seq.)
>CHL1810017565
KP455987
Euglenozoa
Monomorphina parapyrum UTEX 2354 (KP455987)
487
568
+
Leu
CAA
[ENA]
¡û
Identical group No.232373 (1 seq.)
>CHL090100435
AJ294725
Euglenozoa
Euglena longa
38955
39036
+
Leu
CAA
[ENA]
¡û
Identical group No.232884 (1 seq.)
>CHL090103292
X70810
Euglenozoa
Euglena gracilis
2090
2010
-
Leu
CAA
[ENA]
¡û
Identical group No.611279 (1 seq.)
>CHL1810017677
KP686077
Euglenozoa
Trachelomonas volvocina UTEX 1327 (KP686077)
331
406
+
Leu
CAA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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