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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Euglenozoa
Anticodon = GCA
HIT:
10 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.370763 (1 seq.)
>CHL1810008833
KC684276
Euglenozoa
Euglenaformis proxima SAG 1224-11a (KC684276)
48206
48281
+
Cys
GCA
[ENA]
¡û
Identical group No.706711 (1 seq.)
>CHL090103272
X70810
Euglenozoa
Euglena gracilis
60996
61067
+
Cys
GCA
[ENA]
¡û
Identical group No.732029 (1 seq.)
>CHL1810017505
KP410781
Euglenozoa
Cryptoglena skujai SAG 10.88 (KP410781)
72237
72164
-
Cys
GCA
[ENA]
¡û
Identical group No.744279 (1 seq.)
>CHL1810017556
KP453743
Euglenozoa
Euglenaria anabaena UTEX 373 (KP453743)
60541
60470
-
Cys
GCA
[ENA]
¡û
Identical group No.744285 (1 seq.)
>CHL1810018221
KP939040
Euglenozoa
Euglena archaeoplastidiata Michigan (KP939040)
63487
63413
-
Cys
GCA
[ENA]
¡û
Identical group No.750868 (1 seq.)
>CHL1810017700
KP686077
Euglenozoa
Trachelomonas volvocina UTEX 1327 (KP686077)
20532
20459
-
Cys
GCA
[ENA]
¡û
Identical group No.760749 (1 seq.)
>CHL1810006181
JX457480
Euglenozoa
Monomorphina aenigmatica UTEX1284 (JX457480)
47566
47492
-
Cys
GCA
[ENA]
¡û
Identical group No.775048 (1 seq.)
>CHL1810017583
KP455987
Euglenozoa
Monomorphina parapyrum UTEX 2354 (KP455987)
51949
51876
-
Cys
GCA
[ENA]
¡û
Identical group No.776277 (1 seq.)
>CHL090100427
AJ294725
Euglenozoa
Euglena longa
9494
9567
+
Cys
GCA
[ENA]
¡û
Identical group No.778924 (1 seq.)
>CHL1810005326
JQ237893
Euglenozoa
Euglena viridis NJ001 (JQ237893)
51363
51434
+
Cys
GCA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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