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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Euglenozoa
Anticodon = GCC
HIT:
5 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.581949 (1 seq.)
>CHL1810017489
KP410781
Euglenozoa
Cryptoglena skujai SAG 10.88 (KP410781)
24152
24226
+
Gly
GCC
[ENA]
¡û
Identical group No.706710 (6 seq.)
>CHL1810005320
JQ237893
Euglenozoa
Euglena viridis NJ001 (JQ237893)
28415
28486
+
Gly
GCC
[ENA]
¡û
>CHL1810006166
JX457480
Euglenozoa
Monomorphina aenigmatica UTEX1284 (JX457480)
13315
13386
+
Gly
GCC
[ENA]
¡û
>CHL1810017542
KP453743
Euglenozoa
Euglenaria anabaena UTEX 373 (KP453743)
19419
19490
+
Gly
GCC
[ENA]
¡û
>CHL1810017568
KP455987
Euglenozoa
Monomorphina parapyrum UTEX 2354 (KP455987)
16001
16072
+
Gly
GCC
[ENA]
¡û
>CHL1810018206
KP939040
Euglenozoa
Euglena archaeoplastidiata Michigan (KP939040)
20734
20805
+
Gly
GCC
[ENA]
¡û
>CHL090103266
X70810
Euglenozoa
Euglena gracilis
30884
30955
+
Gly
GCC
[ENA]
¡û
Identical group No.719419 (1 seq.)
>CHL1830000473
KC684276
Euglenozoa
Euglenaformis proxima SAG 1224-11a (KC684276)
89663
89736
+
Gly
GCC
[ENA]
¡û
Identical group No.750866 (1 seq.)
>CHL1810017689
KP686077
Euglenozoa
Trachelomonas volvocina UTEX 1327 (KP686077)
61604
61533
-
Gly
GCC
[ENA]
¡û
Identical group No.776284 (1 seq.)
>CHL090100450
AJ294725
Euglenozoa
Euglena longa
37061
36990
-
Gly
GCC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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