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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Euglenozoa
Anticodon = GCT
HIT:
10 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.12109 (1 seq.)
>CHL090100433
AJ294725
Euglenozoa
Euglena longa
36853
36943
+
Ser
GCT
[ENA]
¡û
Identical group No.27508 (1 seq.)
>CHL1810018214
KP939040
Euglenozoa
Euglena archaeoplastidiata Michigan (KP939040)
90549
90637
+
Ser
GCT
[ENA]
¡û
Identical group No.30230 (1 seq.)
>CHL1810005340
JQ237893
Euglenozoa
Euglena viridis NJ001 (JQ237893)
28700
28612
-
Ser
GCT
[ENA]
¡û
Identical group No.59837 (1 seq.)
>CHL1810008828
KC684276
Euglenozoa
Euglenaformis proxima SAG 1224-11a (KC684276)
28896
28984
+
Ser
GCT
[ENA]
¡û
Identical group No.66624 (1 seq.)
>CHL1810017679
KP686077
Euglenozoa
Trachelomonas volvocina UTEX 1327 (KP686077)
44989
45077
+
Ser
GCT
[ENA]
¡û
Identical group No.68700 (1 seq.)
>CHL1810006174
JX457480
Euglenozoa
Monomorphina aenigmatica UTEX1284 (JX457480)
69072
69158
+
Ser
GCT
[ENA]
¡û
Identical group No.78703 (1 seq.)
>CHL090103290
X70810
Euglenozoa
Euglena gracilis
31302
31217
-
Ser
GCT
[ENA]
¡û
Identical group No.83258 (1 seq.)
>CHL1810017549
KP453743
Euglenozoa
Euglenaria anabaena UTEX 373 (KP453743)
82797
82882
+
Ser
GCT
[ENA]
¡û
Identical group No.86336 (1 seq.)
>CHL1810017576
KP455987
Euglenozoa
Monomorphina parapyrum UTEX 2354 (KP455987)
74828
74913
+
Ser
GCT
[ENA]
¡û
Identical group No.138599 (1 seq.)
>CHL1810017497
KP410781
Euglenozoa
Cryptoglena skujai SAG 10.88 (KP410781)
101244
101329
+
Ser
GCT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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