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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Euglenozoa
Anticodon = GTA
HIT:
10 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.179302 (1 seq.)
>CHL090100439
AJ294725
Euglenozoa
Euglena longa
60923
60841
-
Tyr
GTA
[ENA]
¡û
Identical group No.196759 (1 seq.)
>CHL090103284
X70810
Euglenozoa
Euglena gracilis
100991
100910
-
Tyr
GTA
[ENA]
¡û
Identical group No.200810 (1 seq.)
>CHL1810008841
KC684276
Euglenozoa
Euglenaformis proxima SAG 1224-11a (KC684276)
89924
89843
-
Tyr
GTA
[ENA]
¡û
Identical group No.204401 (1 seq.)
>CHL1810017510
KP410781
Euglenozoa
Cryptoglena skujai SAG 10.88 (KP410781)
24586
24505
-
Tyr
GTA
[ENA]
¡û
Identical group No.208233 (1 seq.)
>CHL1810017562
KP453743
Euglenozoa
Euglenaria anabaena UTEX 373 (KP453743)
19950
19869
-
Tyr
GTA
[ENA]
¡û
Identical group No.208235 (1 seq.)
>CHL1810018226
KP939040
Euglenozoa
Euglena archaeoplastidiata Michigan (KP939040)
21215
21134
-
Tyr
GTA
[ENA]
¡û
Identical group No.209931 (1 seq.)
>CHL1810017683
KP686077
Euglenozoa
Trachelomonas volvocina UTEX 1327 (KP686077)
61198
61279
+
Tyr
GTA
[ENA]
¡û
Identical group No.212982 (1 seq.)
>CHL1810006186
JX457480
Euglenozoa
Monomorphina aenigmatica UTEX1284 (JX457480)
13732
13651
-
Tyr
GTA
[ENA]
¡û
Identical group No.216711 (1 seq.)
>CHL1810017588
KP455987
Euglenozoa
Monomorphina parapyrum UTEX 2354 (KP455987)
16428
16347
-
Tyr
GTA
[ENA]
¡û
Identical group No.217847 (1 seq.)
>CHL1810005331
JQ237893
Euglenozoa
Euglena viridis NJ001 (JQ237893)
85910
85991
+
Tyr
GTA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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