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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Euglenozoa
Anticodon = GTG
HIT:
9 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.706713 (1 seq.)
>CHL090103285
X70810
Euglenozoa
Euglena gracilis
100845
100772
-
His
GTG
[ENA]
¡û
Identical group No.719331 (1 seq.)
>CHL1810008836
KC684276
Euglenozoa
Euglenaformis proxima SAG 1224-11a (KC684276)
89336
89408
+
His
GTG
[ENA]
¡û
Identical group No.732027 (1 seq.)
>CHL1810017492
KP410781
Euglenozoa
Cryptoglena skujai SAG 10.88 (KP410781)
37554
37627
+
His
GTG
[ENA]
¡û
Identical group No.744277 (2 seq.)
>CHL1810006169
JX457480
Euglenozoa
Monomorphina aenigmatica UTEX1284 (JX457480)
25152
25224
+
His
GTG
[ENA]
¡û
>CHL1810017545
KP453743
Euglenozoa
Euglenaria anabaena UTEX 373 (KP453743)
33141
33213
+
His
GTG
[ENA]
¡û
Identical group No.744283 (1 seq.)
>CHL1810018209
KP939040
Euglenozoa
Euglena archaeoplastidiata Michigan (KP939040)
34811
34885
+
His
GTG
[ENA]
¡û
Identical group No.750867 (1 seq.)
>CHL1810017692
KP686077
Euglenozoa
Trachelomonas volvocina UTEX 1327 (KP686077)
48138
48064
-
His
GTG
[ENA]
¡û
Identical group No.775047 (1 seq.)
>CHL1810017571
KP455987
Euglenozoa
Monomorphina parapyrum UTEX 2354 (KP455987)
28943
29015
+
His
GTG
[ENA]
¡û
Identical group No.776281 (1 seq.)
>CHL090100440
AJ294725
Euglenozoa
Euglena longa
60821
60749
-
His
GTG
[ENA]
¡û
Identical group No.778926 (1 seq.)
>CHL1810005335
JQ237893
Euglenozoa
Euglena viridis NJ001 (JQ237893)
72987
72915
-
His
GTG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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