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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Euglenozoa
Anticodon = GTT
HIT:
9 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.706712 (1 seq.)
>CHL090103283
X70810
Euglenozoa
Euglena gracilis
102754
102683
-
Asn
GTT
[ENA]
¡û
Identical group No.719333 (1 seq.)
>CHL1810008843
KC684276
Euglenozoa
Euglenaformis proxima SAG 1224-11a (KC684276)
78441
78368
-
Asn
GTT
[ENA]
¡û
Identical group No.732030 (1 seq.)
>CHL1810017509
KP410781
Euglenozoa
Cryptoglena skujai SAG 10.88 (KP410781)
26343
26272
-
Asn
GTT
[ENA]
¡û
Identical group No.744280 (1 seq.)
>CHL1810017560
KP453743
Euglenozoa
Euglenaria anabaena UTEX 373 (KP453743)
21903
21832
-
Asn
GTT
[ENA]
¡û
Identical group No.744286 (2 seq.)
>CHL1810017587
KP455987
Euglenozoa
Monomorphina parapyrum UTEX 2354 (KP455987)
18196
18123
-
Asn
GTT
[ENA]
¡û
>CHL1810018225
KP939040
Euglenozoa
Euglena archaeoplastidiata Michigan (KP939040)
23064
22993
-
Asn
GTT
[ENA]
¡û
Identical group No.750863 (1 seq.)
>CHL1810017681
KP686077
Euglenozoa
Trachelomonas volvocina UTEX 1327 (KP686077)
59479
59552
+
Asn
GTT
[ENA]
¡û
Identical group No.760750 (1 seq.)
>CHL1810006185
JX457480
Euglenozoa
Monomorphina aenigmatica UTEX1284 (JX457480)
15604
15532
-
Asn
GTT
[ENA]
¡û
Identical group No.776280 (1 seq.)
>CHL090100437
AJ294725
Euglenozoa
Euglena longa
64242
64171
-
Asn
GTT
[ENA]
¡û
Identical group No.778925 (1 seq.)
>CHL1810005330
JQ237893
Euglenozoa
Euglena viridis NJ001 (JQ237893)
84183
84256
+
Asn
GTT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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