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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Euglenozoa
Anticodon = TAA
HIT:
10 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.196758 (1 seq.)
>CHL090103264
X70810
Euglenozoa
Euglena gracilis
24624
24707
+
Leu
TAA
[ENA]
¡û
Identical group No.208232 (1 seq.)
>CHL1810017540
KP453743
Euglenozoa
Euglenaria anabaena UTEX 373 (KP453743)
10207
10288
+
Leu
TAA
[ENA]
¡û
Identical group No.216710 (1 seq.)
>CHL1810017566
KP455987
Euglenozoa
Monomorphina parapyrum UTEX 2354 (KP455987)
10424
10505
+
Leu
TAA
[ENA]
¡û
Identical group No.217062 (1 seq.)
>CHL090100447
AJ294725
Euglenozoa
Euglena longa
37479
37398
-
Leu
TAA
[ENA]
¡û
Identical group No.217846 (1 seq.)
>CHL1810005318
JQ237893
Euglenozoa
Euglena viridis NJ001 (JQ237893)
10958
11041
+
Leu
TAA
[ENA]
¡û
Identical group No.223593 (1 seq.)
>CHL1810008824
KC684276
Euglenozoa
Euglenaformis proxima SAG 1224-11a (KC684276)
439
520
+
Leu
TAA
[ENA]
¡û
Identical group No.224672 (1 seq.)
>CHL1810017487
KP410781
Euglenozoa
Cryptoglena skujai SAG 10.88 (KP410781)
15932
16014
+
Leu
TAA
[ENA]
¡û
Identical group No.225771 (1 seq.)
>CHL1810018204
KP939040
Euglenozoa
Euglena archaeoplastidiata Michigan (KP939040)
15997
16079
+
Leu
TAA
[ENA]
¡û
Identical group No.226266 (1 seq.)
>CHL1810017687
KP686077
Euglenozoa
Trachelomonas volvocina UTEX 1327 (KP686077)
68988
68908
-
Leu
TAA
[ENA]
¡û
Identical group No.227157 (1 seq.)
>CHL1810006164
JX457480
Euglenozoa
Monomorphina aenigmatica UTEX1284 (JX457480)
10565
10647
+
Leu
TAA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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