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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Euglenozoa
Anticodon = TAC
HIT:
11 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.541120 (1 seq.)
>CHL090103282
X70810
Euglenozoa
Euglena gracilis
102844
102770
-
Val
TAC
[ENA]
¡û
Identical group No.561491 (1 seq.)
>CHL1810008842
KC684276
Euglenozoa
Euglenaformis proxima SAG 1224-11a (KC684276)
78520
78446
-
Val
TAC
[ENA]
¡û
Identical group No.581956 (1 seq.)
>CHL1810017508
KP410781
Euglenozoa
Cryptoglena skujai SAG 10.88 (KP410781)
26425
26351
-
Val
TAC
[ENA]
¡û
Identical group No.601843 (1 seq.)
>CHL1810017559
KP453743
Euglenozoa
Euglenaria anabaena UTEX 373 (KP453743)
21977
21905
-
Val
TAC
[ENA]
¡û
Identical group No.601847 (1 seq.)
>CHL1810018224
KP939040
Euglenozoa
Euglena archaeoplastidiata Michigan (KP939040)
23151
23077
-
Val
TAC
[ENA]
¡û
Identical group No.611280 (1 seq.)
>CHL1810017680
KP686077
Euglenozoa
Trachelomonas volvocina UTEX 1327 (KP686077)
59404
59476
+
Val
TAC
[ENA]
¡û
Identical group No.627287 (1 seq.)
>CHL1810006184
JX457480
Euglenozoa
Monomorphina aenigmatica UTEX1284 (JX457480)
15690
15618
-
Val
TAC
[ENA]
¡û
Identical group No.646341 (1 seq.)
>CHL1810017586
KP455987
Euglenozoa
Monomorphina parapyrum UTEX 2354 (KP455987)
18282
18208
-
Val
TAC
[ENA]
¡û
Identical group No.648352 (1 seq.)
>CHL090100444
AJ294725
Euglenozoa
Euglena longa
52259
52187
-
Val
TAC
[ENA]
¡û
Identical group No.648353 (1 seq.)
>CHL090100445
AJ294725
Euglenozoa
Euglena longa
41320
41248
-
Val
TAC
[ENA]
¡û
Identical group No.652657 (1 seq.)
>CHL1810005329
JQ237893
Euglenozoa
Euglena viridis NJ001 (JQ237893)
84099
84173
+
Val
TAC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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