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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Euglenozoa
Anticodon = TAG
HIT:
10 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.111666 (1 seq.)
>CHL090100436
AJ294725
Euglenozoa
Euglena longa
63975
64060
+
Leu
TAG
[ENA]
¡û
Identical group No.130243 (1 seq.)
>CHL090103275
X70810
Euglenozoa
Euglena gracilis
102477
102560
+
Leu
TAG
[ENA]
¡û
Identical group No.167553 (1 seq.)
>CHL1810008840
KC684276
Euglenozoa
Euglenaformis proxima SAG 1224-11a (KC684276)
90052
89969
-
Leu
TAG
[ENA]
¡û
Identical group No.170155 (1 seq.)
>CHL1810017491
KP410781
Euglenozoa
Cryptoglena skujai SAG 10.88 (KP410781)
26058
26140
+
Leu
TAG
[ENA]
¡û
Identical group No.172864 (1 seq.)
>CHL1810017544
KP453743
Euglenozoa
Euglenaria anabaena UTEX 373 (KP453743)
21570
21654
+
Leu
TAG
[ENA]
¡û
Identical group No.172865 (1 seq.)
>CHL1810018208
KP939040
Euglenozoa
Euglena archaeoplastidiata Michigan (KP939040)
22798
22880
+
Leu
TAG
[ENA]
¡û
Identical group No.176217 (1 seq.)
>CHL1810006168
JX457480
Euglenozoa
Monomorphina aenigmatica UTEX1284 (JX457480)
15340
15422
+
Leu
TAG
[ENA]
¡û
Identical group No.179039 (1 seq.)
>CHL1810017570
KP455987
Euglenozoa
Monomorphina parapyrum UTEX 2354 (KP455987)
17898
17980
+
Leu
TAG
[ENA]
¡û
Identical group No.179823 (1 seq.)
>CHL1810005334
JQ237893
Euglenozoa
Euglena viridis NJ001 (JQ237893)
84443
84361
-
Leu
TAG
[ENA]
¡û
Identical group No.209932 (1 seq.)
>CHL1810017691
KP686077
Euglenozoa
Trachelomonas volvocina UTEX 1327 (KP686077)
59745
59664
-
Leu
TAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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