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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Euglenozoa
Anticodon = TCC
HIT:
9 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.541122 (1 seq.)
>CHL090103288
X70810
Euglenozoa
Euglena gracilis
100502
100430
-
Gly
TCC
[ENA]
¡û
Identical group No.561487 (1 seq.)
>CHL1810008826
KC684276
Euglenozoa
Euglenaformis proxima SAG 1224-11a (KC684276)
4869
4941
+
Gly
TCC
[ENA]
¡û
Identical group No.581952 (1 seq.)
>CHL1810017495
KP410781
Euglenozoa
Cryptoglena skujai SAG 10.88 (KP410781)
37953
38025
+
Gly
TCC
[ENA]
¡û
Identical group No.601840 (1 seq.)
>CHL1810017547
KP453743
Euglenozoa
Euglenaria anabaena UTEX 373 (KP453743)
33490
33562
+
Gly
TCC
[ENA]
¡û
Identical group No.601844 (1 seq.)
>CHL1810018212
KP939040
Euglenozoa
Euglena archaeoplastidiata Michigan (KP939040)
35159
35231
+
Gly
TCC
[ENA]
¡û
Identical group No.611284 (1 seq.)
>CHL1810017695
KP686077
Euglenozoa
Trachelomonas volvocina UTEX 1327 (KP686077)
47747
47675
-
Gly
TCC
[ENA]
¡û
Identical group No.627285 (2 seq.)
>CHL1810006172
JX457480
Euglenozoa
Monomorphina aenigmatica UTEX1284 (JX457480)
25519
25591
+
Gly
TCC
[ENA]
¡û
>CHL1810017574
KP455987
Euglenozoa
Monomorphina parapyrum UTEX 2354 (KP455987)
29310
29382
+
Gly
TCC
[ENA]
¡û
Identical group No.648351 (1 seq.)
>CHL090100443
AJ294725
Euglenozoa
Euglena longa
60466
60394
-
Gly
TCC
[ENA]
¡û
Identical group No.652659 (1 seq.)
>CHL1810005338
JQ237893
Euglenozoa
Euglena viridis NJ001 (JQ237893)
72629
72557
-
Gly
TCC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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