This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
Euglenozoa
Anticodon = TCT
HIT:
10 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.388405 (1 seq.)
>CHL1810017511
KP410781
Euglenozoa
Cryptoglena skujai SAG 10.88 (KP410781)
22884
22811
-
Arg
TCT
[ENA]
¡û
Identical group No.706716 (1 seq.)
>CHL090103291
X70810
Euglenozoa
Euglena gracilis
29768
29697
-
Arg
TCT
[ENA]
¡û
Identical group No.719334 (1 seq.)
>CHL1810008847
KC684276
Euglenozoa
Euglenaformis proxima SAG 1224-11a (KC684276)
3442
3371
-
Arg
TCT
[ENA]
¡û
Identical group No.744281 (1 seq.)
>CHL1810017563
KP453743
Euglenozoa
Euglenaria anabaena UTEX 373 (KP453743)
18373
18300
-
Arg
TCT
[ENA]
¡û
Identical group No.744287 (1 seq.)
>CHL1810018227
KP939040
Euglenozoa
Euglena archaeoplastidiata Michigan (KP939040)
19591
19520
-
Arg
TCT
[ENA]
¡û
Identical group No.750864 (1 seq.)
>CHL1810017684
KP686077
Euglenozoa
Trachelomonas volvocina UTEX 1327 (KP686077)
62776
62847
+
Arg
TCT
[ENA]
¡û
Identical group No.760751 (1 seq.)
>CHL1810006187
JX457480
Euglenozoa
Monomorphina aenigmatica UTEX1284 (JX457480)
12288
12215
-
Arg
TCT
[ENA]
¡û
Identical group No.775049 (1 seq.)
>CHL1810017589
KP455987
Euglenozoa
Monomorphina parapyrum UTEX 2354 (KP455987)
13931
13860
-
Arg
TCT
[ENA]
¡û
Identical group No.776279 (1 seq.)
>CHL090100434
AJ294725
Euglenozoa
Euglena longa
37311
37382
+
Arg
TCT
[ENA]
¡û
Identical group No.778929 (1 seq.)
>CHL1810005341
JQ237893
Euglenozoa
Euglena viridis NJ001 (JQ237893)
26154
26082
-
Arg
TCT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK