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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Euglenozoa
Anticodon = TGA
HIT:
10 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.66625 (1 seq.)
>CHL1810017702
KP686077
Euglenozoa
Trachelomonas volvocina UTEX 1327 (KP686077)
12596
12510
-
Ser
TGA
[ENA]
¡û
Identical group No.86337 (1 seq.)
>CHL1810017585
KP455987
Euglenozoa
Monomorphina parapyrum UTEX 2354 (KP455987)
44945
44860
-
Ser
TGA
[ENA]
¡û
Identical group No.86493 (1 seq.)
>CHL090100429
AJ294725
Euglenozoa
Euglena longa
17098
17185
+
Ser
TGA
[ENA]
¡û
Identical group No.97664 (1 seq.)
>CHL090103274
X70810
Euglenozoa
Euglena gracilis
71003
71087
+
Ser
TGA
[ENA]
¡û
Identical group No.100341 (1 seq.)
>CHL1810008835
KC684276
Euglenozoa
Euglenaformis proxima SAG 1224-11a (KC684276)
57803
57887
+
Ser
TGA
[ENA]
¡û
Identical group No.102979 (1 seq.)
>CHL1810017507
KP410781
Euglenozoa
Cryptoglena skujai SAG 10.88 (KP410781)
64940
64856
-
Ser
TGA
[ENA]
¡û
Identical group No.105594 (1 seq.)
>CHL1810017558
KP453743
Euglenozoa
Euglenaria anabaena UTEX 373 (KP453743)
51927
51843
-
Ser
TGA
[ENA]
¡û
Identical group No.105595 (1 seq.)
>CHL1810018223
KP939040
Euglenozoa
Euglena archaeoplastidiata Michigan (KP939040)
55994
55910
-
Ser
TGA
[ENA]
¡û
Identical group No.108789 (1 seq.)
>CHL1810006183
JX457480
Euglenozoa
Monomorphina aenigmatica UTEX1284 (JX457480)
40720
40636
-
Ser
TGA
[ENA]
¡û
Identical group No.112139 (1 seq.)
>CHL1810005328
JQ237893
Euglenozoa
Euglena viridis NJ001 (JQ237893)
58054
58138
+
Ser
TGA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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