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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Euglenozoa
Anticodon = TTG
HIT:
8 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.706715 (1 seq.)
>CHL090103289
X70810
Euglenozoa
Euglena gracilis
31389
31316
-
Gln
TTG
[ENA]
¡û
Identical group No.719330 (1 seq.)
>CHL1810008827
KC684276
Euglenozoa
Euglenaformis proxima SAG 1224-11a (KC684276)
28801
28874
+
Gln
TTG
[ENA]
¡û
Identical group No.732028 (1 seq.)
>CHL1810017496
KP410781
Euglenozoa
Cryptoglena skujai SAG 10.88 (KP410781)
101153
101226
+
Gln
TTG
[ENA]
¡û
Identical group No.744278 (2 seq.)
>CHL1810017548
KP453743
Euglenozoa
Euglenaria anabaena UTEX 373 (KP453743)
82680
82753
+
Gln
TTG
[ENA]
¡û
>CHL1810018213
KP939040
Euglenozoa
Euglena archaeoplastidiata Michigan (KP939040)
90453
90526
+
Gln
TTG
[ENA]
¡û
Identical group No.750862 (1 seq.)
>CHL1810017678
KP686077
Euglenozoa
Trachelomonas volvocina UTEX 1327 (KP686077)
44886
44957
+
Gln
TTG
[ENA]
¡û
Identical group No.760748 (2 seq.)
>CHL1810006173
JX457480
Euglenozoa
Monomorphina aenigmatica UTEX1284 (JX457480)
68973
69046
+
Gln
TTG
[ENA]
¡û
>CHL1810017575
KP455987
Euglenozoa
Monomorphina parapyrum UTEX 2354 (KP455987)
74710
74783
+
Gln
TTG
[ENA]
¡û
Identical group No.776278 (1 seq.)
>CHL090100432
AJ294725
Euglenozoa
Euglena longa
36771
36844
+
Gln
TTG
[ENA]
¡û
Identical group No.778928 (1 seq.)
>CHL1810005339
JQ237893
Euglenozoa
Euglena viridis NJ001 (JQ237893)
28786
28715
-
Gln
TTG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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