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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Euglenozoa
Anticodon = TTT
HIT:
10 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.541118 (1 seq.)
>CHL090103269
X70810
Euglenozoa
Euglena gracilis
37250
37324
+
Lys
TTT
[ENA]
¡û
Identical group No.561488 (1 seq.)
>CHL1810008830
KC684276
Euglenozoa
Euglenaformis proxima SAG 1224-11a (KC684276)
29481
29553
+
Lys
TTT
[ENA]
¡û
Identical group No.581954 (1 seq.)
>CHL1810017502
KP410781
Euglenozoa
Cryptoglena skujai SAG 10.88 (KP410781)
96775
96701
-
Lys
TTT
[ENA]
¡û
Identical group No.601841 (1 seq.)
>CHL1810017553
KP453743
Euglenozoa
Euglenaria anabaena UTEX 373 (KP453743)
78470
78398
-
Lys
TTT
[ENA]
¡û
Identical group No.601846 (1 seq.)
>CHL1810018218
KP939040
Euglenozoa
Euglena archaeoplastidiata Michigan (KP939040)
85880
85806
-
Lys
TTT
[ENA]
¡û
Identical group No.611285 (1 seq.)
>CHL1810017697
KP686077
Euglenozoa
Trachelomonas volvocina UTEX 1327 (KP686077)
40128
40055
-
Lys
TTT
[ENA]
¡û
Identical group No.627286 (1 seq.)
>CHL1810006178
JX457480
Euglenozoa
Monomorphina aenigmatica UTEX1284 (JX457480)
64261
64187
-
Lys
TTT
[ENA]
¡û
Identical group No.646340 (1 seq.)
>CHL1810017580
KP455987
Euglenozoa
Monomorphina parapyrum UTEX 2354 (KP455987)
70127
70053
-
Lys
TTT
[ENA]
¡û
Identical group No.648349 (1 seq.)
>CHL090100431
AJ294725
Euglenozoa
Euglena longa
18790
18862
+
Lys
TTT
[ENA]
¡û
Identical group No.652655 (1 seq.)
>CHL1810005323
JQ237893
Euglenozoa
Euglena viridis NJ001 (JQ237893)
33421
33493
+
Lys
TTT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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