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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Euryarchaeota
Anticodon = CCA
HIT:
42 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.156319 (6 seq.)
>A17A000053
CP000867
Euryarchaeota
Methanococcus maripaludis [CP000867]
934770
934934
+
Trp
CCA
-
¡û
>A17A000665
CP002913
Euryarchaeota
Methanococcus maripaludis X1 [CP002913]
1713239
1713075
-
Trp
CCA
-
¡û
>A178000156
CP002057
Euryarchaeota
Methanococcus voltae [CP002057]
1437066
1437181
+
Trp
CCA
-
¡û
>At1055
CP000609
Euryarchaeota
Methanococcus maripaludis C5 [CP000609]
1672014
1672177
+
Trp
CCA
[Ensembl]
¡û
>At1113
CP000745
Euryarchaeota
Methanococcus maripaludis [CP000745]
922165
922002
-
Trp
CCA
[Ensembl]
¡û
>At1155
BX950229
Euryarchaeota
Methanococcus maripaludis S2 [BX950229]
1627676
1627513
-
Trp
CCA
[Ensembl]
¡û
Identical group No.156320 (23 seq.)
>A17A000046
CP000855
Euryarchaeota
Thermococcus onnurineus NA1 [CP000855]
1367706
1367846
+
Trp
CCA
-
¡û
>A17A000128
CP001398
Euryarchaeota
Thermococcus gammatolerans EJ3 EJ3; DSM 15229 [CP001398]
117102
117241
+
Trp
CCA
-
¡û
>A17A000498
CP002372
Euryarchaeota
Thermococcus barophilus MP [CP002372]
1615156
1615017
-
Trp
CCA
-
¡û
>A17A000581
CP002670
Euryarchaeota
Pyrococcus sp. NA2 [CP002670]
1183208
1183356
+
Trp
CCA
-
¡û
>A17A000589
CP002779
Euryarchaeota
Pyrococcus yayanosii CH1 [CP002779]
890973
890825
-
Trp
CCA
-
¡û
>A17A000674
CP002920
Euryarchaeota
Thermococcus sp. 4557 [CP002920]
1507424
1507284
-
Trp
CCA
-
¡û
>A17A000697
CP002952
Euryarchaeota
Thermococcus sp. AM4 [CP002952]
1521529
1521668
+
Trp
CCA
-
¡û
>A17A000946
CP003534
Euryarchaeota
Pyrococcus sp. ST04 [CP003534]
1103071
1102923
-
Trp
CCA
-
¡û
>A17A000950
CP003651
Euryarchaeota
Thermococcus cleftensis CL1 [CP003651]
1166785
1166646
-
Trp
CCA
-
¡û
>A17A000953
CP003685
Euryarchaeota
Pyrococcus furiosus COM1 [CP003685]
739615
739467
-
Trp
CCA
-
¡û
>A17A001074
CP006670
Euryarchaeota
Thermococcus litoralis DSM 5473 [CP006670]
1250528
1250388
-
Trp
CCA
-
¡û
>A17A001107
CP006965
Euryarchaeota
Thermococcus paralvinellae ES1 [CP006965]
1731062
1730922
-
Trp
CCA
-
¡û
>A17A001169
CP007140
Euryarchaeota
Thermococcus guaymasensis DSM 11113 [CP007140]
776434
776295
-
Trp
CCA
-
¡û
>A17A001183
CP007264
Euryarchaeota
Thermococcus nautili 30-1 [CP007264]
1717567
1717428
-
Trp
CCA
-
¡û
>A17A001210
CP008887
Euryarchaeota
Thermococcus eurythermalis A501 [CP008887]
289071
289210
+
Trp
CCA
-
¡û
>A17A001321
CP010835
Euryarchaeota
Pyrococcus kukulkanii NCB100 [CP010835]
909401
909549
+
Trp
CCA
-
¡û
>A17A001468
CP012200
Euryarchaeota
Thermococcus sp. 2319x1 [CP012200]
1686881
1686742
-
Trp
CCA
-
¡û
>A17A001493
CP013050
Euryarchaeota
Thermococcus barophilus CH5 [CP013050]
1832660
1832521
-
Trp
CCA
-
¡û
>A17A001503
CP014750
Euryarchaeota
Thermococcus peptonophilus OG-1 [CP014750]
879746
879606
-
Trp
CCA
-
¡û
>A17A001689
CP021848
Euryarchaeota
Thermococcus sp. 5-4 [CP021848]
1303517
1303377
-
Trp
CCA
-
¡û
>A17A001828
LN999010
Euryarchaeota
Thermococcus chitonophagus [LN999010]
618577
618725
+
Trp
CCA
-
¡û
>A179000445
CP006670
Euryarchaeota
Thermococcus litoralis DSM 5473 [CP006670]
1250528
1250388
-
Trp
CCA
-
¡û
>A179000456
CP006965
Euryarchaeota
Thermococcus paralvinellae ES1 [CP006965]
1731062
1730922
-
Trp
CCA
-
¡û
Identical group No.156995 (10 seq.)
>A17A000249
CP001696
Euryarchaeota
Methanocaldococcus fervens AG86 [CP001696]
365482
365372
-
Trp
CCA
-
¡û
>A17A000262
CP001787
Euryarchaeota
Methanocaldococcus vulcanius M7 [CP001787]
372215
372105
-
Trp
CCA
-
¡û
>A17A000326
CP001901
Euryarchaeota
Methanocaldococcus sp. FS406-22 [CP001901]
692463
692353
-
Trp
CCA
-
¡û
>A17A001214
CP009149
Euryarchaeota
Methanocaldococcus bathoardescens JH146 [CP009149]
478014
477904
-
Trp
CCA
-
¡û
>A179000097
CP001696
Euryarchaeota
Methanocaldococcus fervens AG86 [CP001696]
365482
365372
-
Trp
CCA
-
¡û
>A179000108
CP001787
Euryarchaeota
Methanocaldococcus vulcanius M7 [CP001787]
372215
372105
-
Trp
CCA
-
¡û
>A179000122
CP001901
Euryarchaeota
Methanocaldococcus sp. FS406-22 [CP001901]
692463
692353
-
Trp
CCA
-
¡û
>A179000267
CP002737
Euryarchaeota
Methanotorris igneus Kol 5 [CP002737]
1085594
1085476
-
Trp
CCA
-
¡û
>A179000504
CP009149
Euryarchaeota
Methanocaldococcus bathoardescens JH146 [CP009149]
478014
477904
-
Trp
CCA
-
¡û
>At0945
L77117
Euryarchaeota
Methanocaldococcus jannaschii DSM 2661 [L77117]
1189945
1190055
+
Trp
CCA
[Ensembl]
¡û
Identical group No.159030 (2 seq.)
>A17A000591
CP002792
Euryarchaeota
Methanothermococcus okinawensis IH1 [CP002792]
792128
792013
-
Trp
CCA
-
¡û
>A179000273
CP002792
Euryarchaeota
Methanothermococcus okinawensis IH1 [CP002792]
792128
792014
-
Trp
CCA
-
¡û
Identical group No.163362 (10 seq.)
>A17A001057
CP006019
Euryarchaeota
Palaeococcus pacificus DY20341 [CP006019]
1832397
1832545
+
Trp
CCA
-
¡û
>A179000052
CP001398
Euryarchaeota
Thermococcus gammatolerans EJ3 EJ3; DSM 15229 [CP001398]
117102
117241
+
Trp
CCA
-
¡û
>A179000205
CP002372
Euryarchaeota
Thermococcus barophilus MP [CP002372]
1615156
1615017
-
Trp
CCA
-
¡û
>A179000271
CP002779
Euryarchaeota
Pyrococcus yayanosii CH1 [CP002779]
890973
890825
-
Trp
CCA
-
¡û
>A179000298
CP002920
Euryarchaeota
Thermococcus sp. 4557 [CP002920]
1507424
1507284
-
Trp
CCA
-
¡û
>A179000394
CP003534
Euryarchaeota
Pyrococcus sp. ST04 [CP003534]
1103071
1102923
-
Trp
CCA
-
¡û
>A179000426
CP006019
Euryarchaeota
Palaeococcus pacificus DY20341 [CP006019]
1832397
1832545
+
Trp
CCA
-
¡û
>A179000634
CP012200
Euryarchaeota
Thermococcus sp. 2319x1 [CP012200]
1686881
1686742
-
Trp
CCA
-
¡û
>A179000656
CP014750
Euryarchaeota
Thermococcus peptonophilus OG-1 [CP014750]
879746
879606
-
Trp
CCA
-
¡û
>At1854
AE009950
Euryarchaeota
Pyrococcus furiosus DSM 3638 [AE009950]
937515
937367
-
Trp
CCA
[Ensembl]
¡û
Identical group No.165778 (17 seq.)
>A17A000182
CP001463
Euryarchaeota
Thermococcus sibiricus MM 739 [CP001463]
1675086
1674945
-
Trp
CCA
-
¡û
>A179000014
CP000855
Euryarchaeota
Thermococcus onnurineus NA1 [CP000855]
1367706
1367846
+
Trp
CCA
-
¡û
>A179000091
CP001463
Euryarchaeota
Thermococcus sibiricus MM 739 [CP001463]
1675086
1674945
-
Trp
CCA
-
¡û
>A179000265
CP002670
Euryarchaeota
Pyrococcus sp. NA2 [CP002670]
1183208
1183356
+
Trp
CCA
-
¡û
>A179000300
CP002952
Euryarchaeota
Thermococcus sp. AM4 [CP002952]
1521529
1521668
+
Trp
CCA
-
¡û
>A179000396
CP003651
Euryarchaeota
Thermococcus cleftensis CL1 [CP003651]
1166785
1166646
-
Trp
CCA
-
¡û
>A179000398
CP003685
Euryarchaeota
Pyrococcus furiosus COM1 [CP003685]
739615
739467
-
Trp
CCA
-
¡û
>A179000470
CP007140
Euryarchaeota
Thermococcus guaymasensis DSM 11113 [CP007140]
776434
776295
-
Trp
CCA
-
¡û
>A179000479
CP007264
Euryarchaeota
Thermococcus nautili 30-1 [CP007264]
1717567
1717428
-
Trp
CCA
-
¡û
>A179000501
CP008887
Euryarchaeota
Thermococcus eurythermalis A501 [CP008887]
289071
289210
+
Trp
CCA
-
¡û
>A179000561
CP010835
Euryarchaeota
Pyrococcus kukulkanii NCB100 [CP010835]
909401
909549
+
Trp
CCA
-
¡û
>A179000652
CP013050
Euryarchaeota
Thermococcus barophilus CH5 [CP013050]
1832660
1832521
-
Trp
CCA
-
¡û
>A179000696
CP021848
Euryarchaeota
Thermococcus sp. 5-4 [CP021848]
1303517
1303377
-
Trp
CCA
-
¡û
>A179000726
LN999010
Euryarchaeota
Thermococcus chitonophagus [LN999010]
618577
618725
+
Trp
CCA
-
¡û
>At1816
AL096836
Euryarchaeota
Pyrococcus abyssi [AL096836]
1330624
1330476
-
Trp
CCA
[Ensembl]
¡û
>At1880
BA000001
Euryarchaeota
Pyrococcus horikoshii OT3 [BA000001]
597231
597379
+
Trp
CCA
[Ensembl]
¡û
>At1936
AP006878
Euryarchaeota
Thermococcus kodakarensis KOD1 [AP006878]
1945687
1945826
+
Trp
CCA
[Ensembl]
¡û
Identical group No.168149 (1 seq.)
>At1294
AE009439
Euryarchaeota
Methanopyrus kandleri AV19 [AE009439]
55068
55221
+
Trp
CCA
[Ensembl]
¡û
Identical group No.172664 (3 seq.)
>A17A000421
CP002009
Euryarchaeota
Methanocaldococcus infernus ME [CP002009]
684046
684156
+
Trp
CCA
-
¡û
>A17A000582
CP002737
Euryarchaeota
Methanotorris igneus Kol 5 [CP002737]
1085594
1085476
-
Trp
CCA
-
¡û
>A179000150
CP002009
Euryarchaeota
Methanocaldococcus infernus ME [CP002009]
684046
684156
+
Trp
CCA
-
¡û
Identical group No.173412 (1 seq.)
>At1043
CP000743
Euryarchaeota
Methanococcus aeolicus Nankai-3 [CP000743]
1449341
1449227
-
Trp
CCA
[Ensembl]
¡û
Identical group No.174817 (1 seq.)
>At1189
CP000742
Euryarchaeota
Methanococcus vannielii SB [CP000742]
1004623
1004459
-
Trp
CCA
[Ensembl]
¡û
Identical group No.179328 (7 seq.)
>A17A001725
HE964772
Euryarchaeota
Methanoculleus bourgensis MS2 MS2T [HE964772]
1109815
1109662
-
Trp
CCA
-
¡û
>A17A001834
LT158599
Euryarchaeota
Methanoculleus bourgensis [LT158599]
1136453
1136300
-
Trp
CCA
-
¡û
>A17A001848
LT549891
Euryarchaeota
Methanoculleus bourgensis [LT549891]
1239607
1239454
-
Trp
CCA
-
¡û
>A179000718
HE964772
Euryarchaeota
Methanoculleus bourgensis MS2 MS2T [HE964772]
1109815
1109663
-
Trp
CCA
-
¡û
>A179000729
LT158599
Euryarchaeota
Methanoculleus bourgensis [LT158599]
1136453
1136301
-
Trp
CCA
-
¡û
>A179000737
LT549891
Euryarchaeota
Methanoculleus bourgensis [LT549891]
1239607
1239455
-
Trp
CCA
-
¡û
>At0656
CP000780
Euryarchaeota
Methanoregula boonei 6A8 [CP000780]
742580
742751
+
Trp
CCA
[Ensembl]
¡û
Identical group No.179333 (23 seq.)
>A178000366
CP004144
Euryarchaeota
Methanosarcina mazei Tuc01 [CP004144]
1862561
1862369
-
Trp
CCA
-
¡û
>A178000441
CP008746
Euryarchaeota
Methanosarcina barkeri CM1 [CP008746]
3795913
3796105
+
Trp
CCA
-
¡û
>A178000452
CP009503
Euryarchaeota
Methanosarcina sp. WWM596 [CP009503]
2718092
2717899
-
Trp
CCA
-
¡û
>A178000456
CP009504
Euryarchaeota
Methanosarcina sp. WH1 [CP009504]
3439097
3439290
+
Trp
CCA
-
¡û
>A178000459
CP009506
Euryarchaeota
Methanosarcina siciliae T4/M [CP009506]
661261
661069
-
Trp
CCA
-
¡û
>A178000462
CP009507
Euryarchaeota
Methanosarcina siciliae HI350 [CP009507]
630373
630181
-
Trp
CCA
-
¡û
>A178000465
CP009508
Euryarchaeota
Methanosarcina siciliae C2J [CP009508]
677818
677626
-
Trp
CCA
-
¡û
>A178000470
CP009509
Euryarchaeota
Methanosarcina mazei WWM610 [CP009509]
3518802
3518994
+
Trp
CCA
-
¡û
>A178000473
CP009511
Euryarchaeota
Methanosarcina mazei SarPi [CP009511]
3477327
3477519
+
Trp
CCA
-
¡û
>A178000476
CP009512
Euryarchaeota
Methanosarcina mazei S-6 [CP009512]
3574499
3574691
+
Trp
CCA
-
¡û
>A178000478
CP009513
Euryarchaeota
Methanosarcina mazei LYC [CP009513]
2826170
2825978
-
Trp
CCA
-
¡û
>A178000480
CP009514
Euryarchaeota
Methanosarcina mazei C16 [CP009514]
1901809
1901617
-
Trp
CCA
-
¡û
>A178000483
CP009515
Euryarchaeota
Methanosarcina lacustris Z-7289 [CP009515]
454109
453915
-
Trp
CCA
-
¡û
>A178000488
CP009516
Euryarchaeota
Methanosarcina horonobensis HB-1 = JCM 15518 [CP009516]
4382633
4382825
+
Trp
CCA
-
¡û
>A178000491
CP009517
Euryarchaeota
Methanosarcina barkeri 3 [CP009517]
2476477
2476285
-
Trp
CCA
-
¡û
>A178000496
CP009520
Euryarchaeota
Methanosarcina vacuolata Z-761 [CP009520]
3491612
3491420
-
Trp
CCA
-
¡û
>A178000499
CP009524
Euryarchaeota
Methanosarcina sp. Kolksee [CP009524]
3517666
3517474
-
Trp
CCA
-
¡û
>A178000502
CP009526
Euryarchaeota
Methanosarcina barkeri str. Wiesmoor [CP009526]
4155610
4155802
+
Trp
CCA
-
¡û
>A178000505
CP009528
Euryarchaeota
Methanosarcina barkeri MS [CP009528]
3796916
3797108
+
Trp
CCA
-
¡û
>A178000508
CP009530
Euryarchaeota
Methanosarcina barkeri 227 [CP009530]
3716095
3716287
+
Trp
CCA
-
¡û
>At1410
AE010299
Euryarchaeota
Methanosarcina acetivorans C2A [AE010299]
751064
750873
-
Trp
CCA
[Ensembl]
¡û
>At1486
CP000099
Euryarchaeota
Methanosarcina barkeri [CP000099]
1909530
1909339
-
Trp
CCA
[Ensembl]
¡û
>At1544
AE008384
Euryarchaeota
Methanosarcina mazei Go1 [AE008384]
2153650
2153459
-
Trp
CCA
[Ensembl]
¡û
Identical group No.184010 (7 seq.)
>A17A000094
CP001338
Euryarchaeota
Methanosphaerula palustris E1-9c [CP001338]
1060884
1061035
+
Trp
CCA
-
¡û
>A17A000484
CP002117
Euryarchaeota
Methanolacinia petrolearia DSM 11571 [CP002117]
820756
820948
+
Trp
CCA
-
¡û
>A179000050
CP001338
Euryarchaeota
Methanosphaerula palustris E1-9c [CP001338]
1060884
1061034
+
Trp
CCA
-
¡û
>A179000191
CP002117
Euryarchaeota
Methanolacinia petrolearia DSM 11571 [CP002117]
820756
820947
+
Trp
CCA
-
¡û
>At1609
CP000254
Euryarchaeota
Methanospirillum hungatei JF-1 [CP000254]
1849204
1849362
+
Trp
CCA
[Ensembl]
¡û
>At2291
CP000562
Euryarchaeota
Methanoculleus marisnigri JR1 [CP000562]
1074898
1074745
-
Trp
CCA
[Ensembl]
¡û
>At2292
CP000559
Euryarchaeota
Methanocorpusculum labreanum Z [CP000559]
1002908
1003083
+
Trp
CCA
[Ensembl]
¡û
Identical group No.197211 (2 seq.)
>A17A000586
CP002772
Euryarchaeota
Methanobacterium paludis SWAN1 [CP002772]
2297099
2296955
-
Trp
CCA
-
¡û
>A179000268
CP002772
Euryarchaeota
Methanobacterium paludis SWAN1 [CP002772]
2297099
2296956
-
Trp
CCA
-
¡û
Identical group No.197212 (3 seq.)
>A17A000778
CP003117
Euryarchaeota
Methanothrix harundinacea 6Ac [CP003117]
1640961
1641138
+
Trp
CCA
-
¡û
>A179000330
CP003117
Euryarchaeota
Methanothrix harundinacea 6Ac [CP003117]
1640961
1641137
+
Trp
CCA
-
¡û
>At1337
CP000477
Euryarchaeota
Methanothrix thermoacetophila PT [CP000477]
799925
800106
+
Trp
CCA
[Ensembl]
¡û
Identical group No.197224 (16 seq.)
>A17A000239
CP001690
Euryarchaeota
Halogeometricum borinquense DSM 11551 PR 3 [CP001690]
1870501
1870323
-
Trp
CCA
-
¡û
>A17A000444
CP002062
Euryarchaeota
Halalkalicoccus jeotgali B3 [CP002062]
1756304
1756102
-
Trp
CCA
-
¡û
>A17A000841
CP003372
Euryarchaeota
Natrinema pellirubrum DSM 15624 [CP003372]
2143778
2143604
-
Trp
CCA
-
¡û
>A17A000907
CP003412
Euryarchaeota
Natrinema sp. J7-2 [CP003412]
727975
728149
+
Trp
CCA
-
¡û
>A17A001628
CP019327
Euryarchaeota
Natronorubrum daqingense JX313 [CP019327]
1247685
1247509
-
Trp
CCA
-
¡û
>A178000114
CP001860
Euryarchaeota
Haloterrigena turkmenica DSM 5511 [CP001860]
2022461
2022635
+
Trp
CCA
-
¡û
>A178000122
CP001932
Euryarchaeota
Natrialba magadii ATCC 43099 [CP001932]
645352
645178
-
Trp
CCA
-
¡û
>A178000283
CP002839
Euryarchaeota
Halopiger xanaduensis SH-6 [CP002839]
3632698
3632525
-
Trp
CCA
-
¡û
>A178000287
CP003050
Euryarchaeota
Halovivax ruber XH-70 [CP003050]
1521672
1521497
-
Trp
CCA
-
¡û
>A178000331
CP003377
Euryarchaeota
Natronobacterium gregoryi SP2 [CP003377]
3226340
3226514
+
Trp
CCA
-
¡û
>A178000362
CP003929
Euryarchaeota
Natronococcus occultus SP4 [CP003929]
3572901
3573075
+
Trp
CCA
-
¡û
>A178000415
CP007055
Euryarchaeota
Halostagnicola larsenii XH-48 [CP007055]
1786706
1786881
+
Trp
CCA
-
¡û
>A178000697
CP019285
Euryarchaeota
Halobiforma lacisalsi AJ5 [CP019285]
2700377
2700551
+
Trp
CCA
-
¡û
>A178000705
CP019893
Euryarchaeota
Natrarchaeobaculum aegyptiacum JW/NM-HA 15 [CP019893]
3524769
3524595
-
Trp
CCA
-
¡û
>A178000721
FR746099
Euryarchaeota
Haloquadratum walsbyi C23 DSM 16854 [FR746099]
1657778
1657956
+
Trp
CCA
-
¡û
>At0851
AM180088
Euryarchaeota
Haloquadratum walsbyi DSM 16790 DSM 16790 [AM180088]
1627110
1627288
+
Trp
CCA
[Ensembl]
¡û
Identical group No.209583 (13 seq.)
>A17A000272
CP001857
Euryarchaeota
Archaeoglobus profundus DSM 5631 [CP001857]
747270
747405
+
Trp
CCA
-
¡û
>A17A000325
CP001899
Euryarchaeota
Ferroglobus placidus DSM 10642 [CP001899]
1643868
1644003
+
Trp
CCA
-
¡û
>A17A001015
CP005290
Euryarchaeota
Archaeoglobus sulfaticallidus PM70-1 [CP005290]
309749
309613
-
Trp
CCA
-
¡û
>A17A001061
CP006577
Euryarchaeota
Archaeoglobus fulgidus DSM 8774 [CP006577]
2279603
2279468
-
Trp
CCA
-
¡û
>A17A001273
CP009552
Euryarchaeota
Geoglobus acetivorans SBH6 [CP009552]
1057172
1057307
+
Trp
CCA
-
¡û
>A17A001364
CP011267
Euryarchaeota
Geoglobus ahangari 234 [CP011267]
214292
214157
-
Trp
CCA
-
¡û
>A179000115
CP001857
Euryarchaeota
Archaeoglobus profundus DSM 5631 [CP001857]
747270
747404
+
Trp
CCA
-
¡û
>A179000120
CP001899
Euryarchaeota
Ferroglobus placidus DSM 10642 [CP001899]
1643868
1644003
+
Trp
CCA
-
¡û
>A179000421
CP005290
Euryarchaeota
Archaeoglobus sulfaticallidus PM70-1 [CP005290]
309749
309614
-
Trp
CCA
-
¡û
>A179000428
CP006577
Euryarchaeota
Archaeoglobus fulgidus DSM 8774 [CP006577]
2279603
2279468
-
Trp
CCA
-
¡û
>A179000530
CP009552
Euryarchaeota
Geoglobus acetivorans SBH6 [CP009552]
1057172
1057307
+
Trp
CCA
-
¡û
>A179000598
CP011267
Euryarchaeota
Geoglobus ahangari 234 [CP011267]
214292
214157
-
Trp
CCA
-
¡û
>At0650
AE000782
Euryarchaeota
Archaeoglobus fulgidus DSM 4304 [AE000782]
2141721
2141586
-
Trp
CCA
[Ensembl]
¡û
Identical group No.209584 (7 seq.)
>A17A000027
AP011952
Euryarchaeota
Methanothermobacter sp. CaT2 [AP011952]
1141932
1141789
-
Trp
CCA
-
¡û
>A17A000251
CP001710
Euryarchaeota
Methanothermobacter marburgensis str. Marburg [CP001710]
1517921
1517777
-
Trp
CCA
-
¡û
>A17A001860
LT608329
Euryarchaeota
Methanothermobacter wolfeii [LT608329]
1528728
1528584
-
Trp
CCA
-
¡û
>A179000004
AP011952
Euryarchaeota
Methanothermobacter sp. CaT2 [AP011952]
1141931
1141790
-
Trp
CCA
-
¡û
>A179000099
CP001710
Euryarchaeota
Methanothermobacter marburgensis str. Marburg [CP001710]
1517920
1517779
-
Trp
CCA
-
¡û
>A179000740
LT608329
Euryarchaeota
Methanothermobacter wolfeii [LT608329]
1528727
1528586
-
Trp
CCA
-
¡û
>At1675
AE000666
Euryarchaeota
Methanothermobacter thermautotrophicus str. Delta H [AE000666]
1159072
1158931
-
Trp
CCA
[Ensembl]
¡û
Identical group No.209585 (5 seq.)
>A178000094
CP001688
Euryarchaeota
Halomicrobium mukohataei DSM 12286 [CP001688]
2273440
2273621
+
Trp
CCA
-
¡û
>A178000285
CP002921
Euryarchaeota
Haloarcula hispanica ATCC 33960 CGMCC 1.2049 [CP002921, CP002922]
1342627
1342807
+
Trp
CCA
-
¡û
>A178000398
CP006884
Euryarchaeota
Haloarcula hispanica N601 [CP006884, CP006885]
1354060
1354240
+
Trp
CCA
-
¡û
>A178000521
CP010529
Euryarchaeota
Haloarcula sp. CBA1115 [CP010529]
2993306
2993486
+
Trp
CCA
-
¡û
>At0749
AY596297
Euryarchaeota
Haloarcula marismortui ATCC 43049 [AY596297, AY596298]
646395
646575
+
Trp
CCA
[Ensembl]
¡û
Identical group No.209588 (3 seq.)
>A178000442
CP008874
Euryarchaeota
Halanaeroarchaeum sulfurireducens HSR2 [CP008874]
1519663
1519487
-
Trp
CCA
-
¡û
>A178000560
CP011564
Euryarchaeota
Halanaeroarchaeum sulfurireducens M27-SA2 [CP011564]
1519866
1519690
-
Trp
CCA
-
¡û
>At0801
AE004437
Euryarchaeota
Halobacterium salinarum NRC-1; ATCC 700922 [AE004437]
770516
770691
+
Trp
CCA
[Ensembl]
¡û
Identical group No.219471 (4 seq.)
>A17A000483
CP002101
Euryarchaeota
Methanosalsum zhilinae DSM 4017 [CP002101]
1355508
1355700
+
Trp
CCA
-
¡û
>A17A000737
CP003083
Euryarchaeota
Methanolobus psychrophilus R15 [CP003083]
2606702
2606898
+
Trp
CCA
-
¡û
>A179000188
CP002101
Euryarchaeota
Methanosalsum zhilinae DSM 4017 [CP002101]
1355508
1355700
+
Trp
CCA
-
¡û
>A179000304
CP003083
Euryarchaeota
Methanolobus psychrophilus R15 [CP003083]
2606703
2606897
+
Trp
CCA
-
¡û
Identical group No.219473 (12 seq.)
>A17A000542
CP002551
Euryarchaeota
Methanobacterium lacus AL-21 [CP002551]
238164
238308
+
Trp
CCA
-
¡û
>A17A001105
CP006933
Euryarchaeota
Methanobacterium formicicum BRM9 [CP006933]
2229618
2229465
-
Trp
CCA
-
¡û
>A17A001782
HG425166
Euryarchaeota
Methanobacterium sp. MB1 [HG425166]
1801297
1801144
-
Trp
CCA
-
¡û
>A17A001784
LN515531
Euryarchaeota
Methanobacterium formicicum [LN515531]
1089038
1088885
-
Trp
CCA
-
¡û
>A17A001792
LN734822
Euryarchaeota
Methanobacterium formicicum [LN734822]
2229984
2229831
-
Trp
CCA
-
¡û
>A17A001856
LT607756
Euryarchaeota
Methanobacterium congolense [LT607756]
2201673
2201530
-
Trp
CCA
-
¡û
>A179000236
CP002551
Euryarchaeota
Methanobacterium lacus AL-21 [CP002551]
238165
238307
+
Trp
CCA
-
¡û
>A179000454
CP006933
Euryarchaeota
Methanobacterium formicicum BRM9 [CP006933]
2229618
2229465
-
Trp
CCA
-
¡û
>A179000719
HG425166
Euryarchaeota
Methanobacterium sp. MB1 [HG425166]
1801297
1801144
-
Trp
CCA
-
¡û
>A179000720
LN515531
Euryarchaeota
Methanobacterium formicicum [LN515531]
1089038
1088885
-
Trp
CCA
-
¡û
>A179000721
LN734822
Euryarchaeota
Methanobacterium formicicum [LN734822]
2229984
2229831
-
Trp
CCA
-
¡û
>A179000738
LT607756
Euryarchaeota
Methanobacterium congolense [LT607756]
2201673
2201531
-
Trp
CCA
-
¡û
Identical group No.219474 (2 seq.)
>A178000380
CP005962
Euryarchaeota
Salinarchaeum sp. Harcht-Bsk1 [CP005962]
3088069
3088239
+
Trp
CCA
-
¡û
>A178000725
HF571520
Euryarchaeota
Halorhabdus tiamatea SARL4B type strain: SARL4B [HF571520]
2534911
2534737
-
Trp
CCA
-
¡û
Identical group No.219476 (9 seq.)
>A17A001160
CP007060
Euryarchaeota
Halobacterium sp. DL1 [CP007060]
1851454
1851277
-
Trp
CCA
-
¡û
>A17A001512
CP016070
Euryarchaeota
Halodesulfurarchaeum formicicum HTSR1 [CP016070]
896142
895970
-
Trp
CCA
-
¡û
>A17A001522
CP016804
Euryarchaeota
Halodesulfurarchaeum formicicum HSR6 [CP016804]
889596
889423
-
Trp
CCA
-
¡û
>A178000002
AM774415
Euryarchaeota
Halobacterium salinarum R1 DSM 671 [AM774415]
763036
763211
+
Trp
CCA
-
¡û
>A178000029
CP001365
Euryarchaeota
Halorubrum lacusprofundi ATCC 49239 [CP001365, CP001366]
1222533
1222708
+
Trp
CCA
-
¡û
>A178000119
CP001868
Euryarchaeota
Haloferax mediterranei ATCC 33500 CGMCC 1.2087 [CP001868]
1221655
1221831
+
Trp
CCA
-
¡û
>A178000139
CP001956
Euryarchaeota
Haloferax volcanii DS2 [CP001956]
1165740
1165917
+
Trp
CCA
-
¡û
>A178000564
CP011947
Euryarchaeota
Haloferax gibbonsii ARA6 [CP011947]
1180264
1180441
+
Trp
CCA
-
¡û
>A178000734
LN831302
Euryarchaeota
Halobacterium hubeiense JI20-1 [LN831302]
1102748
1102924
+
Trp
CCA
-
¡û
Identical group No.220294 (1 seq.)
>At2282
CP000300
Euryarchaeota
Methanococcoides burtonii DSM 6242 [CP000300]
175851
176046
+
Trp
CCA
[Ensembl]
¡û
Identical group No.225728 (2 seq.)
>A178000447
CP009501
Euryarchaeota
Methanosarcina thermophila TM-1 [CP009501]
2695546
2695354
-
Trp
CCA
-
¡û
>A178000448
CP009502
Euryarchaeota
Methanosarcina thermophila CHTI-55 [CP009502]
1335045
1335237
+
Trp
CCA
-
¡û
Identical group No.225757 (7 seq.)
>A17A000418
CP001994
Euryarchaeota
Methanohalophilus mahii DSM 5219 [CP001994]
819045
819245
+
Trp
CCA
-
¡û
>A17A000456
CP002069
Euryarchaeota
Methanohalobium evestigatum Z-7303 [CP002069]
1322647
1322443
-
Trp
CCA
-
¡û
>A17A001223
CP009505
Euryarchaeota
Methanosarcina sp. MTP4 [CP009505]
3654056
3654253
+
Trp
CCA
-
¡û
>A17A001256
CP009518
Euryarchaeota
Methanococcoides methylutens MM1 [CP009518]
794684
794883
+
Trp
CCA
-
¡û
>A17A001543
CP017921
Euryarchaeota
Methanohalophilus halophilus Z-7982 [CP017921]
1887043
1886843
-
Trp
CCA
-
¡û
>A179000168
CP002069
Euryarchaeota
Methanohalobium evestigatum Z-7303 [CP002069]
1322647
1322445
-
Trp
CCA
-
¡û
>A179000509
CP009505
Euryarchaeota
Methanosarcina sp. MTP4 [CP009505]
3654056
3654251
+
Trp
CCA
-
¡û
Identical group No.232260 (2 seq.)
>A17A000798
CP003243
Euryarchaeota
Methanocella conradii HZ254 [CP003243]
2200384
2200174
-
Trp
CCA
-
¡û
>A179000342
CP003243
Euryarchaeota
Methanocella conradii HZ254 [CP003243]
2200384
2200175
-
Trp
CCA
-
¡û
Identical group No.232261 (1 seq.)
>A178000228
CP002565
Euryarchaeota
Methanothrix soehngenii GP6 [CP002565]
1608903
1609106
+
Trp
CCA
-
¡û
Identical group No.238271 (1 seq.)
>A178000172
CP002278
Euryarchaeota
Methanothermus fervidus DSM 2088 [CP002278]
476156
476291
+
Trp
CCA
-
¡û
Identical group No.238280 (2 seq.)
>A178000730
HF582854
Euryarchaeota
Natronomonas moolapensis 8.8.11 [HF582854]
2259298
2259118
-
Trp
CCA
-
¡û
>At1723
CR936257
Euryarchaeota
Natronomonas pharaonis DSM 2160 Gabara [CR936257]
1620543
1620363
-
Trp
CCA
[Ensembl]
¡û
Identical group No.248930 (3 seq.)
>A17A000196
CP001687
Euryarchaeota
Halorhabdus utahensis DSM 12940 [CP001687]
2854620
2854444
-
Trp
CCA
-
¡û
>A17A001558
CP019067
Euryarchaeota
Halorientalis sp. IM1011 [CP019067]
15945
16123
+
Trp
CCA
-
¡û
>A17A001583
CP019067
Euryarchaeota
Halorientalis sp. IM1011 [CP019067]
3377676
3377854
+
Trp
CCA
-
¡û
Identical group No.252744 (1 seq.)
>A17A000019
AP011532
Euryarchaeota
Methanocella paludicola SANAE [AP011532]
1474758
1475000
+
Trp
CCA
-
¡û
Identical group No.256903 (4 seq.)
>A17A000789
CP003167
Euryarchaeota
Methanoregula formicica SMSP [CP003167]
2011337
2011163
-
Trp
CCA
-
¡û
>A17A000825
CP003362
Euryarchaeota
Methanomethylovorans hollandica DSM 15978 [CP003362]
1868184
1868372
+
Trp
CCA
-
¡û
>A179000336
CP003167
Euryarchaeota
Methanoregula formicica SMSP [CP003167]
2011337
2011164
-
Trp
CCA
-
¡û
>A179000365
CP003362
Euryarchaeota
Methanomethylovorans hollandica DSM 15978 [CP003362]
1868184
1868371
+
Trp
CCA
-
¡û
Identical group No.262296 (1 seq.)
>At2084
AM114193
Euryarchaeota
Methanocella arvoryzae MRE50 [AM114193]
215398
215150
-
Trp
CCA
[Ensembl]
¡û
Identical group No.269038 (1 seq.)
>CL170700008
CP002988
Euryarchaeota
halophilic archaeon DL31 [CP002988]
808575
808399
-
Trp
CCA
[Ensembl]
¡û
Identical group No.274972 (2 seq.)
>A17A000551
CP002588
Euryarchaeota
Archaeoglobus veneficus SNP6 [CP002588]
900745
900882
+
Trp
CCA
-
¡û
>A179000243
CP002588
Euryarchaeota
Archaeoglobus veneficus SNP6 [CP002588]
900745
900881
+
Trp
CCA
-
¡û
Identical group No.303805 (5 seq.)
>A17A001010
CP004050
Euryarchaeota
Methanobrevibacter sp. AbM4 [CP004050]
1850490
1850333
-
Trp
CCA
-
¡û
>A179000560
CP010834
Euryarchaeota
Methanobrevibacter sp. YE315 [CP010834]
2064814
2064667
-
Trp
CCA
-
¡û
>A17A001501
CP014265
Euryarchaeota
Methanobrevibacter olleyae YLM1 [CP014265]
1755367
1755210
-
Trp
CCA
-
¡û
>At0911
CP000678
Euryarchaeota
Methanobrevibacter smithii ATCC 35061 ATCC 35061; PS; DSMZ 861 [CP000678]
1050247
1050099
-
Trp
CCA
[Ensembl]
¡û
>At1592
CP000102
Euryarchaeota
Methanosphaera stadtmanae DSM 3091 [CP000102]
1696551
1696409
-
Trp
CCA
[Ensembl]
¡û
Identical group No.343295 (4 seq.)
>A17A000253
CP001719
Euryarchaeota
Methanobrevibacter ruminantium M1 [CP001719]
2583770
2583615
-
Trp
CCA
-
¡û
>A17A001320
CP010834
Euryarchaeota
Methanobrevibacter sp. YE315 [CP010834]
2064815
2064666
-
Trp
CCA
-
¡û
>A17A001363
CP011266
Euryarchaeota
Methanobrevibacter millerae SM9 [CP011266]
2295926
2295777
-
Trp
CCA
-
¡û
>A179000596
CP011266
Euryarchaeota
Methanobrevibacter millerae SM9 [CP011266]
2295925
2295778
-
Trp
CCA
-
¡û
Identical group No.349864 (1 seq.)
>A17A001481
CP012986
Euryarchaeota
Nanohaloarchaea archaeon SG9 [CP012986]
668263
668602
+
Trp
CCA
-
¡û
Identical group No.478305 (1 seq.)
>A171000972
CP001719
Euryarchaeota
Methanobrevibacter ruminantium M1 [CP001719]
360730
360659
-
Pseudo
CCA
-
¡û
Identical group No.494412 (2 seq.)
>A171006875
CP019067
Euryarchaeota
Halorientalis sp. IM1011 [CP019067]
2243902
2243831
-
Trp
CCA
-
¡û
>W1910229718
FOCX01000031
Euryarchaeota
Halorientalis persicus IBRC-M 10043 [FOCX]
20237
20166
-
Trp
CCA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
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Start
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Direction
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