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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Euryarchaeota
Anticodon = TCG
HIT:
76 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.235724 (2 seq.)
>A171002255
CP002772
Euryarchaeota
Methanobacterium paludis SWAN1 [CP002772]
2463840
2463764
-
Arg
TCG
-
¡û
>W1910575104
JQLY01000001
Euryarchaeota
Methanobacterium sp. SMA-27 [JQLY]
2323752
2323676
-
Arg
TCG
[ENA]
¡û
Identical group No.237027 (1 seq.)
>A171002018
CP002551
Euryarchaeota
Methanobacterium lacus AL-21 [CP002551]
133133
133209
+
Arg
TCG
-
¡û
Identical group No.237731 (1 seq.)
>A171001812
CP002278
Euryarchaeota
Methanothermus fervidus DSM 2088 [CP002278]
941642
941567
-
Arg
TCG
-
¡û
Identical group No.238185 (1 seq.)
>At1303
AE009439
Euryarchaeota
Methanopyrus kandleri AV19 [AE009439]
954681
954755
+
Arg
TCG
[Ensembl]
¡û
Identical group No.240114 (3 seq.)
>At1576
CP000102
Euryarchaeota
Methanosphaera stadtmanae DSM 3091 [CP000102]
1757158
1757233
+
Arg
TCG
[Ensembl]
¡û
>W1910656132
MAIF01000110
Euryarchaeota
Methanosphaera sp. A6 [MAIF]
7982
7905
-
Arg
TCG
[ENA]
¡û
>W1910899171
NGJK01000096
Euryarchaeota
Methanosphaera stadtmanae PA5 [NGJK]
6537
6614
+
Arg
TCG
[ENA]
¡û
Identical group No.241118 (22 seq.)
>A171000820
CP001690
Euryarchaeota
Halogeometricum borinquense DSM 11551 PR 3 [CP001690]
1733175
1733249
+
Arg
TCG
-
¡û
>A171001415
CP001956
Euryarchaeota
Haloferax volcanii DS2 [CP001956]
1307561
1307487
-
Arg
TCG
-
¡û
>W1910226915
FNFE01000002
Euryarchaeota
Natronorubrum texcoconense B4,CECT 8067,JCM 17497 [FNFE]
355718
355644
-
Arg
TCG
[ENA]
¡û
>W1910230697
FOYS01000002
Euryarchaeota
Halogeometricum limi CGMCC 1.8711 [FOYS]
104817
104891
+
Arg
TCG
[ENA]
¡û
>W1910230737
FOYT01000001
Euryarchaeota
Halogeometricum rufum CGMCC 1.7736 [FOYT]
1746583
1746509
-
Arg
TCG
[ENA]
¡û
>W1911629753
PSYS01000001
Euryarchaeota
Haloferax sp. Atlit-47N [PSYS]
289652
289726
+
Arg
TCG
[ENA]
¡û
>W1911629812
PSYT01000001
Euryarchaeota
Haloferax sp. Atlit-24N [PSYT]
1354989
1354915
-
Arg
TCG
[ENA]
¡û
>W1911655676
QEQI01000001
Euryarchaeota
Haloferax sp. Atlit-48N [QEQI]
291482
291556
+
Arg
TCG
[ENA]
¡û
>W1911709491
QPLO01000001
Euryarchaeota
Haloferax sp. Atlit-109R [QPLO]
1354989
1354915
-
Arg
TCG
[ENA]
¡û
>W1911709540
QPLP01000001
Euryarchaeota
Haloferax sp. Atlit-105R [QPLP]
1354989
1354915
-
Arg
TCG
[ENA]
¡û
>W1911717993
QQTY01000002
Euryarchaeota
Natronorubrum halophilum SHR37 [QQTY]
456695
456620
-
Arg
TCG
[ENA]
¡û
>W1610000739
ABTX01000001
Euryarchaeota
Halogeometricum borinquense DSM 11551 [ABTX]
118128
118202
+
Arg
TCG
[ENA]
¡û
>W1610011767
AOHT01000024
Euryarchaeota
Halogeometricum borinquense DSM 11551 [AOHT]
118379
118453
+
Arg
TCG
[ENA]
¡û
>W1610011814
AOHU01000090
Euryarchaeota
Haloferax volcanii DS2 [AOHU]
71351
71425
+
Arg
TCG
[ENA]
¡û
>W1610011909
AOHW01000023
Euryarchaeota
Natronorubrum tibetense GA33 [AOHW]
101293
101367
+
Arg
TCG
[ENA]
¡û
>W1610011962
AOHX01000041
Euryarchaeota
Natronorubrum sulfidifaciens JCM 14089 [AOHX]
41852
41927
+
Arg
TCG
[ENA]
¡û
>W1610012882
AOIV01000044
Euryarchaeota
Halogeometricum pallidum JCM 14848 [AOIV]
97436
97510
+
Arg
TCG
[ENA]
¡û
>W1610013455
AOLD01000017
Euryarchaeota
Haloferax sp. ATCC BAA-646 [AOLD]
276066
276143
+
Arg
TCG
[ENA]
¡û
>W1610013525
AOLE01000019
Euryarchaeota
Haloferax sp. ATCC BAA-645 [AOLE]
107997
108074
+
Arg
TCG
[ENA]
¡û
>W1610013553
AOLF01000013
Euryarchaeota
Haloferax sp. ATCC BAA-644 [AOLF]
503859
503782
-
Arg
TCG
[ENA]
¡û
>W1610013674
AOLH01000015
Euryarchaeota
Haloferax lucentense DSM 14919 [AOLH]
252562
252636
+
Arg
TCG
[ENA]
¡û
>W1610019010
ARPH01000002
Euryarchaeota
Natronorubrum tibetense GA33 [ARPH]
399999
399925
-
Arg
TCG
[ENA]
¡û
Identical group No.241123 (20 seq.)
>A171002618
CP002921
Euryarchaeota
Haloarcula hispanica ATCC 33960 CGMCC 1.2049 [CP002921, CP002922]
1872851
1872925
+
Arg
TCG
-
¡û
>A171003951
CP006884
Euryarchaeota
Haloarcula hispanica N601 [CP006884, CP006885]
1884284
1884358
+
Arg
TCG
-
¡û
>A171005787
CP010529
Euryarchaeota
Haloarcula sp. CBA1115 [CP010529]
473995
474069
+
Arg
TCG
-
¡û
>At0752
AY596297
Euryarchaeota
Haloarcula marismortui ATCC 43049 [AY596297, AY596298]
1197384
1197458
+
Arg
TCG
[Ensembl]
¡û
>W1910175116
BIXZ01000004
Euryarchaeota
Haloarcula mannanilytica MD-130 MD130-1 [BIXZ]
196822
196748
-
Arg
TCG
[ENA]
¡û
>W1910228402
FNOF01000014
Euryarchaeota
Haloarcula vallismortis DSM 3756 [FNOF]
76751
76677
-
Arg
TCG
[ENA]
¡û
>W1910583047
JXAO01000009
Euryarchaeota
Haloarcula argentinensis H5-DGR [JXAO]
53692
53618
-
Arg
TCG
[ENA]
¡û
>W1910617610
LIUF01000005
Euryarchaeota
Haloarcula rubripromontorii SL3 [LIUF]
207891
207817
-
Arg
TCG
[ENA]
¡û
>W1911709439
QPLN01000001
Euryarchaeota
Haloarcula sp. Atlit-120R [QPLN]
34199
34273
+
Arg
TCG
[ENA]
¡û
>W1911709576
QPLQ01000001
Euryarchaeota
Haloarcula sp. Atlit-47R [QPLQ]
34364
34438
+
Arg
TCG
[ENA]
¡û
>W1911770060
QXIK01000019
Euryarchaeota
Haloarcula sp. Atlit-7R [QXIK]
10829
10755
-
Arg
TCG
[ENA]
¡û
>W1610014134
AOLQ01000025
Euryarchaeota
Haloarcula vallismortis ATCC 29715 [AOLQ]
76656
76582
-
Arg
TCG
[ENA]
¡û
>W1610014160
AOLR01000002
Euryarchaeota
Haloarcula sinaiiensis ATCC 33800 [AOLR]
32504
32578
+
Arg
TCG
[ENA]
¡û
>W1610014205
AOLS01000008
Euryarchaeota
Haloarcula californiae ATCC 33799 [AOLS]
32365
32439
+
Arg
TCG
[ENA]
¡û
>W1610014291
AOLW01000050
Euryarchaeota
Haloarcula amylolytica JCM 13557 [AOLW]
146278
146204
-
Arg
TCG
[ENA]
¡û
>W1610014344
AOLX01000027
Euryarchaeota
Haloarcula argentinensis DSM 12282 [AOLX]
223762
223688
-
Arg
TCG
[ENA]
¡û
>W1610014379
AOLY01000009
Euryarchaeota
Haloarcula japonica DSM 6131 [AOLY]
305764
305690
-
Arg
TCG
[ENA]
¡û
>W1610061895
BCNA01000001
Euryarchaeota
Haloarcula sp. CBA1128 [BCNA]
1192345
1192419
+
Arg
TCG
[ENA]
¡û
>W1610061959
BCNB01000006
Euryarchaeota
Haloarcula sp. CBA1127 [BCNB]
1757837
1757763
-
Arg
TCG
[ENA]
¡û
>W1610881015
LRHL01000011
Euryarchaeota
Haloarcula sp. K1 [LRHL]
33398
33472
+
Arg
TCG
[ENA]
¡û
Identical group No.241139 (3 seq.)
>A171000775
CP001688
Euryarchaeota
Halomicrobium mukohataei DSM 12286 [CP001688]
1907614
1907688
+
Arg
TCG
-
¡û
>W1610000813
ABTY01000001
Euryarchaeota
Halomicrobium mukohataei DSM 12286 [ABTY]
1819102
1819028
-
Arg
TCG
[ENA]
¡û
>W1610018995
AQZY01000019
Euryarchaeota
Halomicrobium katesii DSM 19301 [AQZY]
21998
21924
-
Arg
TCG
[ENA]
¡û
Identical group No.241197 (9 seq.)
>A171007462
LN831302
Euryarchaeota
Halobacterium hubeiense JI20-1 [LN831302]
651996
651922
-
Arg
TCG
-
¡û
>W1610061885
BCMZ01000001
Euryarchaeota
Halobacterium sp. CBA1132 [BCMZ]
590026
589952
-
Arg
TCG
[ENA]
¡û
>W1610085092
CEML01000002
Euryarchaeota
Halobacterium hubeiense JI20-4 [CEML]
433653
433576
-
Arg
TCG
[ENA]
¡û
>W1610085111
CEMN01000001
Euryarchaeota
Halobacterium hubeiense JI20-3 [CEMN]
2030616
2030693
+
Arg
TCG
[ENA]
¡û
>W1610085150
CEMO01000001
Euryarchaeota
Halobacterium hubeiense JI20-2 [CEMO]
2073962
2074039
+
Arg
TCG
[ENA]
¡û
>W1610085189
CEMP01000001
Euryarchaeota
Halobacterium hubeiense JI20-6 [CEMP]
2115867
2115944
+
Arg
TCG
[ENA]
¡û
>W1610085250
CEMQ01000001
Euryarchaeota
Halobacterium hubeiense JI20-7 [CEMQ]
442577
442500
-
Arg
TCG
[ENA]
¡û
>W1610085291
CEMR01000002
Euryarchaeota
Halobacterium hubeiense JI20-5 [CEMR]
442534
442457
-
Arg
TCG
[ENA]
¡û
>W1610085332
CEMZ01000001
Euryarchaeota
Halobacterium hubeiense JI20-8 [CEMZ]
442481
442404
-
Arg
TCG
[ENA]
¡û
Identical group No.241217 (11 seq.)
>A171000271
CP000867
Euryarchaeota
Methanococcus maripaludis [CP000867]
1298816
1298739
-
Arg
TCG
-
¡û
>A171001526
CP002057
Euryarchaeota
Methanococcus voltae [CP002057]
48897
48976
+
Arg
TCG
-
¡û
>A171001527
CP002057
Euryarchaeota
Methanococcus voltae [CP002057]
113153
113232
+
Arg
TCG
-
¡û
>A171002500
CP002913
Euryarchaeota
Methanococcus maripaludis X1 [CP002913]
1350908
1350985
+
Arg
TCG
-
¡û
>At1065
CP000609
Euryarchaeota
Methanococcus maripaludis C5 [CP000609]
276134
276060
-
Arg
TCG
[Ensembl]
¡û
>At1082
CP000745
Euryarchaeota
Methanococcus maripaludis [CP000745]
532127
532201
+
Arg
TCG
[Ensembl]
¡û
>At1133
BX950229
Euryarchaeota
Methanococcus maripaludis S2 [BX950229]
1263591
1263665
+
Arg
TCG
[Ensembl]
¡û
>W1610000331
AAWI01000003
Euryarchaeota
Methanococcus maripaludis C5 [AAWI]
211814
211892
+
Arg
TCG
[ENA]
¡û
>W1610000460
AAZM01000001
Euryarchaeota
Methanococcus maripaludis C7 [AAZM]
456583
456505
-
Arg
TCG
[ENA]
¡û
>W1610000584
ABFP01000001
Euryarchaeota
Methanococcus maripaludis C6 [ABFP]
399588
399510
-
Arg
TCG
[ENA]
¡û
>W1610000595
ABHB01000001
Euryarchaeota
Methanococcus voltae A3 [ABHB]
1142675
1142754
+
Arg
TCG
[ENA]
¡û
Identical group No.244311 (21 seq.)
>A171001308
CP001932
Euryarchaeota
Natrialba magadii ATCC 43099 [CP001932]
3308130
3308055
-
Arg
TCG
-
¡û
>A171003175
CP003412
Euryarchaeota
Natrinema sp. J7-2 [CP003412]
3120638
3120564
-
Arg
TCG
-
¡û
>W1910226707
FMZP01000013
Euryarchaeota
Natrinema hispanicum CDM_1 [FMZP]
62518
62443
-
Arg
TCG
[ENA]
¡û
>W1910229804
FOFD01000002
Euryarchaeota
Natrinema salaciae DSM 25055 [FOFD]
570406
570332
-
Arg
TCG
[ENA]
¡û
>W1910229919
FOIC01000015
Euryarchaeota
Natrinema hispanicum CDM_6 [FOIC]
20364
20439
+
Arg
TCG
[ENA]
¡û
>W1910572703
JNCS01000002
Euryarchaeota
Natrinema altunense AJ2 [JNCS]
236468
236542
+
Arg
TCG
[ENA]
¡û
>W1910583024
JXAN01000078
Euryarchaeota
Natrinema altunense 1A4-DGR [JXAN]
894
820
-
Arg
TCG
[ENA]
¡û
>W1910657571
MASN01000035
Euryarchaeota
Natrialba sp. SSL1 [MASN]
258792
258866
+
Arg
TCG
[ENA]
¡û
>W1610001067
ACIT01000004
Euryarchaeota
Natrialba magadii ATCC 43099 [ACIT]
5036
4961
-
Arg
TCG
[ENA]
¡û
>W1610005365
AJVG01000003
Euryarchaeota
Natrinema sp. J7-1 [AJVG]
1234
1160
-
Arg
TCG
[ENA]
¡û
>W1610011732
AOHS01000044
Euryarchaeota
Natrialba magadii ATCC 43099 MS-3 [AOHS]
91257
91332
+
Arg
TCG
[ENA]
¡û
>W1610012197
AOID01000013
Euryarchaeota
Natrinema versiforme JCM 10478 [AOID]
16294
16368
+
Arg
TCG
[ENA]
¡û
>W1610012311
AOII01000088
Euryarchaeota
Natrinema pallidum DSM 3751 [AOII]
19418
19492
+
Arg
TCG
[ENA]
¡û
>W1610012362
AOIJ01000063
Euryarchaeota
Natrinema gari JCM 14663 [AOIJ]
76227
76301
+
Arg
TCG
[ENA]
¡û
>W1610012375
AOIK01000013
Euryarchaeota
Natrinema altunense JCM 12890 [AOIK]
95969
96043
+
Arg
TCG
[ENA]
¡û
>W1610012451
AOIL01000069
Euryarchaeota
Natrialba taiwanensis DSM 12281 [AOIL]
40745
40820
+
Arg
TCG
[ENA]
¡û
>W1610012494
AOIM01000041
Euryarchaeota
Natrialba hulunbeirensis JCM 10989 [AOIM]
145367
145293
-
Arg
TCG
[ENA]
¡û
>W1610012512
AOIN01000055
Euryarchaeota
Natrialba chahannaoensis JCM 10990 [AOIN]
4823
4748
-
Arg
TCG
[ENA]
¡û
>W1610012559
AOIO01000030
Euryarchaeota
Natrialba asiatica DSM 12278 [AOIO]
149954
150028
+
Arg
TCG
[ENA]
¡û
>W1610012587
AOIP01000012
Euryarchaeota
Natrialba aegyptia DSM 13077 [AOIP]
42892
42966
+
Arg
TCG
[ENA]
¡û
>W1610012764
AOIT01000016
Euryarchaeota
Natrinema limicola JCM 13563 [AOIT]
154208
154133
-
Arg
TCG
[ENA]
¡û
Identical group No.244703 (2 seq.)
>A171000721
CP001687
Euryarchaeota
Halorhabdus utahensis DSM 12940 [CP001687]
93150
93226
+
Arg
TCG
-
¡û
>W1610000831
ABTZ01000001
Euryarchaeota
Halorhabdus utahensis DSM 12940 [ABTZ]
821923
821999
+
Arg
TCG
[ENA]
¡û
Identical group No.244722 (33 seq.)
>A171001192
CP001868
Euryarchaeota
Haloferax mediterranei ATCC 33500 CGMCC 1.2087 [CP001868]
1415310
1415236
-
Arg
TCG
-
¡û
>A171006226
CP011947
Euryarchaeota
Haloferax gibbonsii ARA6 [CP011947]
1317410
1317336
-
Arg
TCG
-
¡û
>W1910186256
CCDK010000005
Euryarchaeota
Haloferax prahovense Arc-Hr [CCDK]
879591
879517
-
Arg
TCG
[ENA]
¡û
>W1910193538
CSTE01000002
Euryarchaeota
Haloferax massiliensis Arc-Hr [CSTE]
706105
706179
+
Arg
TCG
[ENA]
¡û
>W1910227028
FNHL01000003
Euryarchaeota
Halogranum gelatinilyticum CGMCC 1.10119 [FNHL]
85244
85170
-
Arg
TCG
[ENA]
¡û
>W1910227098
FNKQ01000002
Euryarchaeota
Halopelagius longus CGMCC 1.12397 [FNKQ]
316876
316950
+
Arg
TCG
[ENA]
¡û
>W1910229606
FOAD01000001
Euryarchaeota
Haloferax larsenii CDM_5 [FOAD]
1072347
1072272
-
Arg
TCG
[ENA]
¡û
>W1910230490
FOTC01000002
Euryarchaeota
Halogranum rubrum CGMCC 1.7738 [FOTC]
982580
982506
-
Arg
TCG
[ENA]
¡û
>W1910573476
JPES01000030
Euryarchaeota
Haloferax sp. ATB1 [JPES]
9156
9230
+
Arg
TCG
[ENA]
¡û
>W1911629873
PSYU01000002
Euryarchaeota
Haloferax sp. Atlit-19N [PSYU]
301856
301930
+
Arg
TCG
[ENA]
¡û
>W1911629910
PSYV01000001
Euryarchaeota
Haloferax sp. Atlit-16N [PSYV]
1072590
1072516
-
Arg
TCG
[ENA]
¡û
>W1911629949
PSYW01000001
Euryarchaeota
Haloferax sp. Atlit-12N [PSYW]
52056
52130
+
Arg
TCG
[ENA]
¡û
>W1911630010
PSYX01000001
Euryarchaeota
Haloferax sp. Atlit-10N [PSYX]
1072590
1072516
-
Arg
TCG
[ENA]
¡û
>W1911630062
PSYY01000001
Euryarchaeota
Haloferax sp. Atlit-4N [PSYY]
1454098
1454024
-
Arg
TCG
[ENA]
¡û
>W1911655719
QEQJ01000001
Euryarchaeota
Haloferax sp. Atlit-6N [QEQJ]
302659
302733
+
Arg
TCG
[ENA]
¡û
>W1911655720
QEQJ01000001
Euryarchaeota
Haloferax sp. Atlit-6N [QEQJ]
309965
310039
+
Arg
TCG
[ENA]
¡û
>W1911717762
QQRR01000001
Euryarchaeota
Haloprofundus halophilus NK23 [QQRR]
337893
337967
+
Arg
TCG
[ENA]
¡û
>W1911717807
QQST01000001
Euryarchaeota
Halopelagius longus BC12-B1 [QQST]
361100
361174
+
Arg
TCG
[ENA]
¡û
>W1610005867
ALJD01000002
Euryarchaeota
Halogranum salarium B-1 [ALJD]
383664
383738
+
Arg
TCG
[ENA]
¡û
>W1610011525
ANPG01000475
Euryarchaeota
Haloferax sp. BAB-2207 BAB2207 [ANPG]
2428
2354
-
Arg
TCG
[ENA]
¡û
>W1610013623
AOLG01000013
Euryarchaeota
Haloferax prahovense DSM 18310 [AOLG]
2068
1994
-
Arg
TCG
[ENA]
¡û
>W1610013705
AOLI01000009
Euryarchaeota
Haloferax larsenii JCM 13917 [AOLI]
206229
206155
-
Arg
TCG
[ENA]
¡û
>W1610013796
AOLJ01000022
Euryarchaeota
Haloferax gibbonsii ATCC 33959 [AOLJ]
269908
269982
+
Arg
TCG
[ENA]
¡û
>W1610013823
AOLK01000015
Euryarchaeota
Haloferax elongans ATCC BAA-1513 [AOLK]
547076
547002
-
Arg
TCG
[ENA]
¡û
>W1610013857
AOLL01000008
Euryarchaeota
Haloferax alexandrinus JCM 10717 [AOLL]
268669
268743
+
Arg
TCG
[ENA]
¡û
>W1610013917
AOLM01000004
Euryarchaeota
Haloferax sulfurifontis ATCC BAA-897 [AOLM]
163960
164034
+
Arg
TCG
[ENA]
¡û
>W1610013958
AOLN01000001
Euryarchaeota
Haloferax mucosum ATCC BAA-1512 [AOLN]
315292
315366
+
Arg
TCG
[ENA]
¡û
>W1610014009
AOLO01000003
Euryarchaeota
Haloferax mediterranei ATCC 33500 [AOLO]
35547
35621
+
Arg
TCG
[ENA]
¡û
>W1610014085
AOLP01000014
Euryarchaeota
Haloferax denitrificans ATCC 35960 [AOLP]
47347
47273
-
Arg
TCG
[ENA]
¡û
>W1610784297
LOEP01000018
Euryarchaeota
Haloferax sp. Q22 [LOEP]
6531
6605
+
Arg
TCG
[ENA]
¡û
>W1610799794
LOPU01000018
Euryarchaeota
Haloprofundus marisrubri SB9 [LOPU]
761207
761133
-
Arg
TCG
[ENA]
¡û
>W1610799865
LOPV01000716
Euryarchaeota
Haloferax profundi SB29 [LOPV]
2188
2114
-
Arg
TCG
[ENA]
¡û
>W1610799886
LOPW01000031
Euryarchaeota
Haloferax marisrubri SB3 [LOPW]
134117
134043
-
Arg
TCG
[ENA]
¡û
Identical group No.244820 (2 seq.)
>A171002355
CP002792
Euryarchaeota
Methanothermococcus okinawensis IH1 [CP002792]
378418
378344
-
Arg
TCG
-
¡û
>W1610002125
AEDA01000003
Euryarchaeota
Methanothermococcus okinawensis IH1 [AEDA]
116017
115943
-
Arg
TCG
[ENA]
¡û
Identical group No.248076 (2 seq.)
>A171004418
CP008874
Euryarchaeota
Halanaeroarchaeum sulfurireducens HSR2 [CP008874]
1050945
1050867
-
Arg
TCG
-
¡û
>A171006176
CP011564
Euryarchaeota
Halanaeroarchaeum sulfurireducens M27-SA2 [CP011564]
1047802
1047724
-
Arg
TCG
-
¡û
Identical group No.250829 (2 seq.)
>A171006598
CP014750
Euryarchaeota
Thermococcus peptonophilus OG-1 [CP014750]
1494774
1494697
-
Arg
TCG
-
¡û
>At1932
AP006878
Euryarchaeota
Thermococcus kodakarensis KOD1 [AP006878]
1499113
1499190
+
Arg
TCG
[Ensembl]
¡û
Identical group No.250836 (6 seq.)
>A171004132
CP007055
Euryarchaeota
Halostagnicola larsenii XH-48 [CP007055]
984813
984887
+
Arg
TCG
-
¡û
>A171006986
CP019327
Euryarchaeota
Natronorubrum daqingense JX313 [CP019327]
688829
688755
-
Arg
TCG
-
¡û
>W1910229304
FNWL01000001
Euryarchaeota
Natronorubrum sediminis CGMCC 1.8981 [FNWL]
366985
367059
+
Arg
TCG
[ENA]
¡û
>W1910230854
FOZS01000002
Euryarchaeota
Halostagnicola kamekurae DSM 22427 [FOZS]
809730
809805
+
Arg
TCG
[ENA]
¡û
>W1910340486
FTNP01000001
Euryarchaeota
Natronorubrum daqingense CGMCC 1.8909 [FTNP]
363458
363532
+
Arg
TCG
[ENA]
¡û
>W1910572563
JMIP02000015
Euryarchaeota
Halostagnicola sp. A56 [JMIP]
39240
39314
+
Arg
TCG
[ENA]
¡û
Identical group No.252654 (2 seq.)
>At1156
CP000742
Euryarchaeota
Methanococcus vannielii SB [CP000742]
643422
643496
+
Arg
TCG
[Ensembl]
¡û
>W1610000346
AAWX01000001
Euryarchaeota
Methanococcus vannielii SB [AAWX]
379991
380069
+
Arg
TCG
[ENA]
¡û
Identical group No.252695 (3 seq.)
>A171000474
CP001398
Euryarchaeota
Thermococcus gammatolerans EJ3 EJ3; DSM 15229 [CP001398]
475647
475724
+
Arg
TCG
-
¡û
>A171002668
CP002952
Euryarchaeota
Thermococcus sp. AM4 [CP002952]
1921675
1921752
+
Arg
TCG
-
¡û
>W1610000878
ABXN01000011
Euryarchaeota
Thermococcus sp. AM4 [ABXN]
54290
54367
+
Arg
TCG
[ENA]
¡û
Identical group No.252717 (1 seq.)
>A171002303
CP002779
Euryarchaeota
Pyrococcus yayanosii CH1 [CP002779]
1624584
1624661
+
Arg
TCG
-
¡û
Identical group No.252741 (1 seq.)
>A171003297
CP003534
Euryarchaeota
Pyrococcus sp. ST04 [CP003534]
52457
52380
-
Arg
TCG
-
¡û
Identical group No.253217 (3 seq.)
>A171003365
CP003685
Euryarchaeota
Pyrococcus furiosus COM1 [CP003685]
1558770
1558693
-
Arg
TCG
-
¡û
>At1842
AE009950
Euryarchaeota
Pyrococcus furiosus DSM 3638 [AE009950]
1844702
1844779
+
Arg
TCG
[Ensembl]
¡û
>At1917
BA000001
Euryarchaeota
Pyrococcus horikoshii OT3 [BA000001]
1735806
1735729
-
Arg
TCG
[Ensembl]
¡û
Identical group No.254654 (1 seq.)
>A171002164
CP002670
Euryarchaeota
Pyrococcus sp. NA2 [CP002670]
734854
734931
+
Arg
TCG
-
¡û
Identical group No.256405 (2 seq.)
>A171000856
CP001696
Euryarchaeota
Methanocaldococcus fervens AG86 [CP001696]
810095
810172
+
Arg
TCG
-
¡û
>W1610001103
ACQW01000003
Euryarchaeota
Methanocaldococcus fervens AG86 [ACQW]
81860
81938
+
Arg
TCG
[ENA]
¡û
Identical group No.256468 (1 seq.)
>A171006412
CP012986
Euryarchaeota
Nanohaloarchaea archaeon SG9 [CP012986]
578251
578173
-
Arg
TCG
-
¡û
Identical group No.256683 (1 seq.)
>At1824
AL096836
Euryarchaeota
Pyrococcus abyssi [AL096836]
1761997
1761923
-
Arg
TCG
[Ensembl]
¡û
Identical group No.259819 (2 seq.)
>A171004171
CP007060
Euryarchaeota
Halobacterium sp. DL1 [CP007060]
1107382
1107456
+
Arg
TCG
-
¡û
>W1610004176
AGIR01000001
Euryarchaeota
Halobacterium sp. DL1 [AGIR]
2251098
2251024
-
Arg
TCG
[ENA]
¡û
Identical group No.259858 (1 seq.)
>A171003765
CP006019
Euryarchaeota
Palaeococcus pacificus DY20341 [CP006019]
389704
389781
+
Arg
TCG
-
¡û
Identical group No.259877 (1 seq.)
>A171006890
CP019067
Euryarchaeota
Halorientalis sp. IM1011 [CP019067]
2240809
2240733
-
Arg
TCG
-
¡û
Identical group No.261099 (2 seq.)
>A171007222
HF571520
Euryarchaeota
Halorhabdus tiamatea SARL4B type strain: SARL4B [HF571520]
48851
48927
+
Arg
TCG
-
¡û
>W1610003266
AFNT02000012
Euryarchaeota
Halorhabdus tiamatea SARL4B [AFNT]
67762
67686
-
Arg
TCG
[ENA]
¡û
Identical group No.262380 (2 seq.)
>A171004302
CP007264
Euryarchaeota
Thermococcus nautili 30-1 [CP007264]
29364
29287
-
Arg
TCG
-
¡û
>A171004448
CP008887
Euryarchaeota
Thermococcus eurythermalis A501 [CP008887]
1044604
1044681
+
Arg
TCG
-
¡û
Identical group No.262390 (1 seq.)
>A171007536
LN999010
Euryarchaeota
Thermococcus chitonophagus [LN999010]
58230
58153
-
Arg
TCG
-
¡û
Identical group No.265363 (1 seq.)
>A171002231
CP002737
Euryarchaeota
Methanotorris igneus Kol 5 [CP002737]
653937
653861
-
Arg
TCG
-
¡û
Identical group No.265372 (2 seq.)
>A171006692
CP016070
Euryarchaeota
Halodesulfurarchaeum formicicum HTSR1 [CP016070]
1134571
1134645
+
Arg
TCG
-
¡û
>A171006733
CP016804
Euryarchaeota
Halodesulfurarchaeum formicicum HSR6 [CP016804]
1166485
1166559
+
Arg
TCG
-
¡û
Identical group No.275055 (9 seq.)
>A178000484
CP009515
Euryarchaeota
Methanosarcina lacustris Z-7289 [CP009515]
1412053
1411959
-
Arg
TCG
-
¡û
>A178000489
CP009517
Euryarchaeota
Methanosarcina barkeri 3 [CP009517]
792959
792866
-
Arg
TCG
-
¡û
>A178000495
CP009520
Euryarchaeota
Methanosarcina vacuolata Z-761 [CP009520]
2894662
2894568
-
Arg
TCG
-
¡û
>A178000498
CP009524
Euryarchaeota
Methanosarcina sp. Kolksee [CP009524]
2931593
2931499
-
Arg
TCG
-
¡û
>A178000500
CP009526
Euryarchaeota
Methanosarcina barkeri str. Wiesmoor [CP009526]
2031717
2031811
+
Arg
TCG
-
¡û
>A178000451
CP009503
Euryarchaeota
Methanosarcina sp. WWM596 [CP009503]
1607799
1607704
-
Arg
TCG
-
¡û
>A178000454
CP009504
Euryarchaeota
Methanosarcina sp. WH1 [CP009504]
1506411
1506316
-
Arg
TCG
-
¡û
>A178000457
CP009505
Euryarchaeota
Methanosarcina sp. MTP4 [CP009505]
2469413
2469528
+
Arg
TCG
-
¡û
>At1492
CP000099
Euryarchaeota
Methanosarcina barkeri [CP000099]
3995529
3995436
-
Arg
TCG
[Ensembl]
¡û
Identical group No.301899 (2 seq.)
>A171006545
CP014265
Euryarchaeota
Methanobrevibacter olleyae YLM1 [CP014265]
1827781
1827856
+
Arg
TCG
-
¡û
>W1910230556
FOTL01000039
Euryarchaeota
Methanobrevibacter olleyae DSM 16632 [FOTL]
7648
7573
-
Arg
TCG
[ENA]
¡û
Identical group No.322029 (1 seq.)
>A171005697
CP009552
Euryarchaeota
Geoglobus acetivorans SBH6 [CP009552]
393112
393037
-
Arg
TCG
-
¡û
Identical group No.322042 (3 seq.)
>A178000439
CP008746
Euryarchaeota
Methanosarcina barkeri CM1 [CP008746]
353283
353377
+
Arg
TCG
-
¡û
>A178000504
CP009528
Euryarchaeota
Methanosarcina barkeri MS [CP009528]
2787394
2787300
-
Arg
TCG
-
¡û
>A178000506
CP009530
Euryarchaeota
Methanosarcina barkeri 227 [CP009530]
356411
356505
+
Arg
TCG
-
¡û
Identical group No.322050 (14 seq.)
>A178000445
CP009501
Euryarchaeota
Methanosarcina thermophila TM-1 [CP009501]
930795
930889
+
Arg
TCG
-
¡û
>A178000450
CP009502
Euryarchaeota
Methanosarcina thermophila CHTI-55 [CP009502]
3106382
3106288
-
Arg
TCG
-
¡û
>A178000486
CP009516
Euryarchaeota
Methanosarcina horonobensis HB-1 = JCM 15518 [CP009516]
2559057
2559152
+
Arg
TCG
-
¡û
>A178000368
CP004144
Euryarchaeota
Methanosarcina mazei Tuc01 [CP004144]
3062352
3062257
-
Arg
TCG
-
¡û
>A178000461
CP009506
Euryarchaeota
Methanosarcina siciliae T4/M [CP009506]
1750747
1750842
+
Arg
TCG
-
¡û
>A178000464
CP009507
Euryarchaeota
Methanosarcina siciliae HI350 [CP009507]
1701719
1701814
+
Arg
TCG
-
¡û
>A178000467
CP009508
Euryarchaeota
Methanosarcina siciliae C2J [CP009508]
3422878
3422783
-
Arg
TCG
-
¡û
>A178000468
CP009509
Euryarchaeota
Methanosarcina mazei WWM610 [CP009509]
2028324
2028419
+
Arg
TCG
-
¡û
>A178000471
CP009511
Euryarchaeota
Methanosarcina mazei SarPi [CP009511]
2020088
2020183
+
Arg
TCG
-
¡û
>A178000474
CP009512
Euryarchaeota
Methanosarcina mazei S-6 [CP009512]
2091053
2091148
+
Arg
TCG
-
¡û
>A178000477
CP009513
Euryarchaeota
Methanosarcina mazei LYC [CP009513]
1876508
1876413
-
Arg
TCG
-
¡û
>A178000482
CP009514
Euryarchaeota
Methanosarcina mazei C16 [CP009514]
3753898
3753993
+
Arg
TCG
-
¡û
>At1417
AE010299
Euryarchaeota
Methanosarcina acetivorans C2A [AE010299]
3031244
3031151
-
Arg
TCG
[Ensembl]
¡û
>At1552
AE008384
Euryarchaeota
Methanosarcina mazei Go1 [AE008384]
3631276
3631183
-
Arg
TCG
[Ensembl]
¡û
Identical group No.338138 (4 seq.)
>A171003563
CP004050
Euryarchaeota
Methanobrevibacter sp. AbM4 [CP004050]
1913570
1913644
+
Arg
TCG
-
¡û
>W1910569118
JHWX01000014
Euryarchaeota
Methanobrevibacter wolinii SH [JHWX]
36063
35989
-
Arg
TCG
[ENA]
¡û
>W1910793152
MRCT01000043
Euryarchaeota
Methanobrevibacter sp. 87.7 [MRCT]
3960
4034
+
Arg
TCG
[ENA]
¡û
>W1610040619
BAGX02000020
Euryarchaeota
Methanobrevibacter boviskoreani JH1 [BAGX]
216846
216920
+
Arg
TCG
[ENA]
¡û
Identical group No.340343 (1 seq.)
>At0963
CP000300
Euryarchaeota
Methanococcoides burtonii DSM 6242 [CP000300]
436719
436814
+
Arg
TCG
[Ensembl]
¡û
Identical group No.349709 (1 seq.)
>A179000668
CP017921
Euryarchaeota
Methanohalophilus halophilus Z-7982 [CP017921]
1377983
1377885
-
Arg
TCG
-
¡û
Identical group No.361329 (2 seq.)
>A171001507
CP002009
Euryarchaeota
Methanocaldococcus infernus ME [CP002009]
115613
115539
-
Arg
TCG
-
¡û
>W1610001131
ACQY01000001
Euryarchaeota
Methanocaldococcus infernus ME [ACQY]
86027
85953
-
Arg
TCG
[ENA]
¡û
Identical group No.361473 (1 seq.)
>A171006074
CP011266
Euryarchaeota
Methanobrevibacter millerae SM9 [CP011266]
2434644
2434718
+
Arg
TCG
-
¡û
Identical group No.372640 (1 seq.)
>A171005859
CP010834
Euryarchaeota
Methanobrevibacter sp. YE315 [CP010834]
138610
138535
-
Arg
TCG
-
¡û
Identical group No.399295 (1 seq.)
>A171000070
AP011532
Euryarchaeota
Methanocella paludicola SANAE [AP011532]
2622994
2622920
-
Arg
TCG
-
¡û
Identical group No.407530 (1 seq.)
>A178000160
CP002069
Euryarchaeota
Methanohalobium evestigatum Z-7303 [CP002069]
508894
508795
-
Arg
TCG
-
¡û
Identical group No.415945 (1 seq.)
>A178000493
CP009518
Euryarchaeota
Methanococcoides methylutens MM1 [CP009518]
920839
920935
+
Arg
TCG
-
¡û
Identical group No.422947 (1 seq.)
>A179000364
CP003362
Euryarchaeota
Methanomethylovorans hollandica DSM 15978 [CP003362]
1742563
1742652
+
Arg
TCG
-
¡û
Identical group No.429436 (1 seq.)
>A171005875
CP010835
Euryarchaeota
Pyrococcus kukulkanii NCB100 [CP010835]
1332569
1332645
+
Arg
TCG
-
¡û
Identical group No.446351 (1 seq.)
>A178000290
CP003083
Euryarchaeota
Methanolobus psychrophilus R15 [CP003083]
410176
410274
+
Arg
TCG
-
¡û
Identical group No.446354 (1 seq.)
>A179000147
CP001994
Euryarchaeota
Methanohalophilus mahii DSM 5219 [CP001994]
1338943
1339040
+
Arg
TCG
-
¡û
Identical group No.456295 (3 seq.)
>A171003901
CP006670
Euryarchaeota
Thermococcus litoralis DSM 5473 [CP006670]
482577
482502
-
Arg
TCG
-
¡û
>W1910200322
FJMQ01000103
Euryarchaeota
Thermococcus litoralis [FJMQ]
29405
29330
-
Arg
TCG
[ENA]
¡û
>W1610004908
AHVB01000009
Euryarchaeota
Thermococcus litoralis DSM 5473 [AHVB]
934
859
-
Arg
TCG
[ENA]
¡û
Identical group No.485712 (1 seq.)
>A171004029
CP006965
Euryarchaeota
Thermococcus paralvinellae ES1 [CP006965]
266784
266859
+
Arg
TCG
-
¡û
Identical group No.526082 (2 seq.)
>A171001240
CP001899
Euryarchaeota
Ferroglobus placidus DSM 10642 [CP001899]
1034327
1034253
-
Arg
TCG
-
¡û
>W1610001581
ACYZ01000001
Euryarchaeota
Ferroglobus placidus DSM 10642 [ACYZ]
97430
97356
-
Pseudo
TCG
[ENA]
¡û
Identical group No.526235 (3 seq.)
>A171002567
CP002920
Euryarchaeota
Thermococcus sp. 4557 [CP002920]
722304
722379
+
Arg
TCG
-
¡û
>A171004217
CP007140
Euryarchaeota
Thermococcus guaymasensis DSM 11113 [CP007140]
1135375
1135450
+
Arg
TCG
-
¡û
>A171007095
CP021848
Euryarchaeota
Thermococcus sp. 5-4 [CP021848]
370274
370349
+
Arg
TCG
-
¡û
Identical group No.538523 (3 seq.)
>A171001858
CP002372
Euryarchaeota
Thermococcus barophilus MP [CP002372]
156530
156605
+
Arg
TCG
-
¡û
>A171006458
CP013050
Euryarchaeota
Thermococcus barophilus CH5 [CP013050]
187372
187447
+
Arg
TCG
-
¡û
>W1610000697
ABSF01000002
Euryarchaeota
Thermococcus barophilus MP [ABSF]
3815
3890
+
Arg
TCG
[ENA]
¡û
Identical group No.563647 (1 seq.)
>A171003301
CP003651
Euryarchaeota
Thermococcus cleftensis CL1 [CP003651]
369260
369335
+
Arg
TCG
-
¡û
Identical group No.628483 (1 seq.)
>A171000188
CP000855
Euryarchaeota
Thermococcus onnurineus NA1 [CP000855]
158981
159056
+
Arg
TCG
-
¡û
Identical group No.640513 (1 seq.)
>A171002122
CP002588
Euryarchaeota
Archaeoglobus veneficus SNP6 [CP002588]
886654
886582
-
Arg
TCG
-
¡û
Identical group No.647526 (1 seq.)
>A171001067
CP001857
Euryarchaeota
Archaeoglobus profundus DSM 5631 [CP001857]
286315
286387
+
Arg
TCG
-
¡û
Identical group No.647547 (1 seq.)
>A171006663
CP015520
Euryarchaeota
Thermococcus piezophilus CDGS [CP015520]
1365650
1365575
-
Arg
TCG
-
¡û
Identical group No.659649 (1 seq.)
>At0936
L77117
Euryarchaeota
Methanocaldococcus jannaschii DSM 2661 [L77117]
862590
862661
+
Arg
TCG
[Ensembl]
¡û
Identical group No.659728 (2 seq.)
>At1611
CP000254
Euryarchaeota
Methanospirillum hungatei JF-1 [CP000254]
2522186
2522257
+
Arg
TCG
[Ensembl]
¡û
>W1610000172
AALU01000006
Euryarchaeota
Methanospirillum hungatei JF-1 [AALU]
9089
9160
+
Arg
TCG
[ENA]
¡û
Identical group No.673291 (1 seq.)
>A179000333
CP003117
Euryarchaeota
Methanothrix harundinacea 6Ac [CP003117]
1083320
1083232
-
Arg
TCG
-
¡û
Identical group No.676163 (2 seq.)
>A171002839
CP003167
Euryarchaeota
Methanoregula formicica SMSP [CP003167]
2591152
2591223
+
Arg
TCG
-
¡û
>At0678
CP000780
Euryarchaeota
Methanoregula boonei 6A8 [CP000780]
509768
509697
-
Arg
TCG
[Ensembl]
¡û
Identical group No.697566 (2 seq.)
>A171001232
CP001899
Euryarchaeota
Ferroglobus placidus DSM 10642 [CP001899]
1587689
1587618
-
Arg
TCG
-
¡û
>W1610001584
ACYZ01000002
Euryarchaeota
Ferroglobus placidus DSM 10642 [ACYZ]
116242
116171
-
Pseudo
TCG
[ENA]
¡û
Identical group No.697582 (2 seq.)
>A171001784
CP002117
Euryarchaeota
Methanolacinia petrolearia DSM 11571 [CP002117]
412945
412873
-
Arg
TCG
-
¡û
>W1610029786
AXDV01000064
Euryarchaeota
Methanolacinia paynteri DSM 2545 [AXDV]
54964
54892
-
Arg
TCG
[ENA]
¡û
Identical group No.697639 (1 seq.)
>A171006113
CP011267
Euryarchaeota
Geoglobus ahangari 234 [CP011267]
1164985
1165057
+
Arg
TCG
-
¡û
Identical group No.697647 (1 seq.)
>A179000189
CP002101
Euryarchaeota
Methanosalsum zhilinae DSM 4017 [CP002101]
493254
493151
-
Arg
TCG
-
¡û
Identical group No.713265 (3 seq.)
>A171003838
CP006577
Euryarchaeota
Archaeoglobus fulgidus DSM 8774 [CP006577]
1032403
1032329
-
Arg
TCG
-
¡û
>At0634
AE000782
Euryarchaeota
Archaeoglobus fulgidus DSM 4304 [AE000782]
985809
985738
-
Arg
TCG
[Ensembl]
¡û
>W1910200365
FJNF01000135
Euryarchaeota
Archaeoglobus fulgidus [FJNF]
1752
1678
-
Arg
TCG
[ENA]
¡û
Identical group No.713276 (1 seq.)
>A178000231
CP002565
Euryarchaeota
Methanothrix soehngenii GP6 [CP002565]
2808425
2808334
-
Arg
TCG
-
¡û
Identical group No.720585 (2 seq.)
>A171001015
CP001787
Euryarchaeota
Methanocaldococcus vulcanius M7 [CP001787]
1741984
1741913
-
Arg
TCG
-
¡û
>W1610001534
ACUW01000001
Euryarchaeota
Methanocaldococcus vulcanius M7 [ACUW]
477513
477587
+
Arg
TCG
[ENA]
¡û
Identical group No.728097 (1 seq.)
>At1354
CP000477
Euryarchaeota
Methanothrix thermoacetophila PT [CP000477]
143220
143133
-
Arg
TCG
[Ensembl]
¡û
Identical group No.756830 (2 seq.)
>A171000374
CP001338
Euryarchaeota
Methanosphaerula palustris E1-9c [CP001338]
326052
326125
+
Arg
TCG
-
¡û
>W1610001009
ABZB01000003
Euryarchaeota
Methanosphaerula palustris palustris E1-9c [ABZB]
487475
487548
+
Arg
TCG
[ENA]
¡û
Identical group No.756846 (1 seq.)
>A171003647
CP005290
Euryarchaeota
Archaeoglobus sulfaticallidus PM70-1 [CP005290]
711422
711494
+
Arg
TCG
-
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
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