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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Euryarchaeota
Anticodon = TCT
HIT:
54 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.235696 (4 seq.)
>A171000734
CP001687
Euryarchaeota
Halorhabdus utahensis DSM 12940 [CP001687]
1842580
1842655
+
Arg
TCT
-
¡û
>A171007253
HF571520
Euryarchaeota
Halorhabdus tiamatea SARL4B type strain: SARL4B [HF571520]
1864780
1864705
-
Arg
TCT
-
¡û
>W1610000844
ABTZ01000001
Euryarchaeota
Halorhabdus utahensis DSM 12940 [ABTZ]
2573966
2574041
+
Arg
TCT
[ENA]
¡û
>W1610003277
AFNT02000026
Euryarchaeota
Halorhabdus tiamatea SARL4B [AFNT]
13739
13814
+
Arg
TCT
[ENA]
¡û
Identical group No.240410 (1 seq.)
>A179000293
CP002839
Euryarchaeota
Halopiger xanaduensis SH-6 [CP002839]
647728
647624
-
Arg
TCT
-
¡û
Identical group No.241113 (13 seq.)
>A171001108
CP001860
Euryarchaeota
Haloterrigena turkmenica DSM 5511 [CP001860]
287922
287996
+
Arg
TCT
-
¡û
>A171003064
CP003372
Euryarchaeota
Natrinema pellirubrum DSM 15624 [CP003372]
3628921
3628847
-
Arg
TCT
-
¡û
>W1910226920
FNFE01000004
Euryarchaeota
Natronorubrum texcoconense B4,CECT 8067,JCM 17497 [FNFE]
178489
178563
+
Arg
TCT
[ENA]
¡û
>W1910229805
FOFD01000003
Euryarchaeota
Natrinema salaciae DSM 25055 [FOFD]
485877
485951
+
Arg
TCT
[ENA]
¡û
>W1910568500
JDTG01000009
Euryarchaeota
Natrinema thermotolerans A29 [JDTG]
391511
391585
+
Arg
TCT
[ENA]
¡û
>W1910569061
JHUT02000003
Euryarchaeota
Natrinema mahii H13 [JHUT]
119466
119540
+
Arg
TCT
[ENA]
¡û
>W1910646130
LWLN01000001
Euryarchaeota
Natrinema saccharevitans AB14 [LWLN]
3075201
3075127
-
Arg
TCT
[ENA]
¡û
>W1610004133
AGIN01000007
Euryarchaeota
Natrinema pellirubrum DSM 15624 [AGIN]
27160
27086
-
Arg
TCT
[ENA]
¡û
>W1610011925
AOHW01000051
Euryarchaeota
Natronorubrum tibetense GA33 [AOHW]
27536
27462
-
Arg
TCT
[ENA]
¡û
>W1610012275
AOIE01000105
Euryarchaeota
Natrinema pellirubrum DSM 15624 [AOIE]
38054
37980
-
Arg
TCT
[ENA]
¡û
>W1610012665
AOIR01000031
Euryarchaeota
Natrinema thermotolerans DSM 11522 [AOIR]
39225
39151
-
Arg
TCT
[ENA]
¡û
>W1610012716
AOIS01000012
Euryarchaeota
Haloterrigena salina JCM 13891 [AOIS]
53362
53288
-
Arg
TCT
[ENA]
¡û
>W1610019013
ARPH01000004
Euryarchaeota
Natronorubrum tibetense GA33 [ARPH]
370280
370354
+
Arg
TCT
[ENA]
¡û
Identical group No.241195 (8 seq.)
>A171007449
LN831302
Euryarchaeota
Halobacterium hubeiense JI20-1 [LN831302]
2385294
2385369
+
Arg
TCT
-
¡û
>W1610085067
CEML01000001
Euryarchaeota
Halobacterium hubeiense JI20-4 [CEML]
1138485
1138560
+
Arg
TCT
[ENA]
¡û
>W1610085132
CEMN01000001
Euryarchaeota
Halobacterium hubeiense JI20-3 [CEMN]
321168
321093
-
Arg
TCT
[ENA]
¡û
>W1610085171
CEMO01000001
Euryarchaeota
Halobacterium hubeiense JI20-2 [CEMO]
363526
363451
-
Arg
TCT
[ENA]
¡û
>W1610085210
CEMP01000001
Euryarchaeota
Halobacterium hubeiense JI20-6 [CEMP]
363007
362932
-
Arg
TCT
[ENA]
¡û
>W1610085233
CEMQ01000001
Euryarchaeota
Halobacterium hubeiense JI20-7 [CEMQ]
2195777
2195852
+
Arg
TCT
[ENA]
¡û
>W1610085266
CEMR01000001
Euryarchaeota
Halobacterium hubeiense JI20-5 [CEMR]
1138551
1138626
+
Arg
TCT
[ENA]
¡û
>W1610085315
CEMZ01000001
Euryarchaeota
Halobacterium hubeiense JI20-8 [CEMZ]
2152380
2152455
+
Arg
TCT
[ENA]
¡û
Identical group No.241215 (9 seq.)
>A171001560
CP002057
Euryarchaeota
Methanococcus voltae [CP002057]
594
519
-
Arg
TCT
-
¡û
>A171002496
CP002913
Euryarchaeota
Methanococcus maripaludis X1 [CP002913]
328101
328178
+
Arg
TCT
-
¡û
>At1071
CP000609
Euryarchaeota
Methanococcus maripaludis C5 [CP000609]
1283171
1283094
-
Arg
TCT
[Ensembl]
¡û
>At1097
CP000745
Euryarchaeota
Methanococcus maripaludis [CP000745]
1300479
1300556
+
Arg
TCT
[Ensembl]
¡û
>At1128
BX950229
Euryarchaeota
Methanococcus maripaludis S2 [BX950229]
335487
335564
+
Arg
TCT
[Ensembl]
¡û
>W1610000328
AAWI01000002
Euryarchaeota
Methanococcus maripaludis C5 [AAWI]
74203
74126
-
Arg
TCT
[ENA]
¡û
>W1610000478
AAZM01000002
Euryarchaeota
Methanococcus maripaludis C7 [AAZM]
473332
473255
-
Arg
TCT
[ENA]
¡û
>W1610000604
ABHB01000001
Euryarchaeota
Methanococcus voltae A3 [ABHB]
1094372
1094297
-
Arg
TCT
[ENA]
¡û
>W1610018889
AQXV01000046
Euryarchaeota
Methanothermococcus thermolithotrophicus DSM 2095 [AQXV]
41687
41764
+
Arg
TCT
[ENA]
¡û
Identical group No.241259 (3 seq.)
>A171007573
LT158599
Euryarchaeota
Methanoculleus bourgensis [LT158599]
260865
260791
-
Arg
TCT
-
¡û
>A171007642
LT549891
Euryarchaeota
Methanoculleus bourgensis [LT549891]
297121
297047
-
Arg
TCT
-
¡û
>W1910211665
FMID01000009
Euryarchaeota
Methanoculleus chikugoensis [FMID]
855
929
+
Arg
TCT
[ENA]
¡û
Identical group No.242138 (4 seq.)
>At1622
CP000254
Euryarchaeota
Methanospirillum hungatei JF-1 [CP000254]
76803
76729
-
Arg
TCT
[Ensembl]
¡û
>W1911675975
QGMZ01000044
Euryarchaeota
Methanospirillum stamsii Pt1 [QGMZ]
38017
37941
-
Arg
TCT
[ENA]
¡û
>W1610000166
AALU01000001
Euryarchaeota
Methanospirillum hungatei JF-1 [AALU]
225515
225440
-
Arg
TCT
[ENA]
¡û
>W1610946065
LUYJ01000337
Euryarchaeota
Methanomicrobiales archaeon Methan_06 [LUYJ]
7182
7257
+
Arg
TCT
[ENA]
¡û
Identical group No.244713 (9 seq.)
>A171006910
CP019285
Euryarchaeota
Halobiforma lacisalsi AJ5 [CP019285]
1051378
1051452
+
Arg
TCT
-
¡û
>W1910227114
FNKQ01000003
Euryarchaeota
Halopelagius longus CGMCC 1.12397 [FNKQ]
625746
625671
-
Arg
TCT
[ENA]
¡û
>W1910229958
FOIS01000004
Euryarchaeota
Natrinema salifodinae CGMCC 1.12284 [FOIS]
380670
380744
+
Arg
TCT
[ENA]
¡û
>W1910230247
FOKW01000005
Euryarchaeota
Halobiforma haloterrestris DSM 13078 [FOKW]
217521
217447
-
Arg
TCT
[ENA]
¡û
>W1910575877
JROF01000011
Euryarchaeota
Natrinema salifodinae KCY07-B2 [JROF]
32596
32670
+
Arg
TCT
[ENA]
¡û
>W1911696816
QNGA01000001
Euryarchaeota
halophilic archaeon H22 [QNGA]
335028
334954
-
Arg
TCT
[ENA]
¡û
>W1911717838
QQST01000001
Euryarchaeota
Halopelagius longus BC12-B1 [QQST]
1647564
1647489
-
Arg
TCT
[ENA]
¡û
>W1610004036
AGFZ01000007
Euryarchaeota
Halobiforma lacisalsi AJ5 [AGFZ]
78883
78809
-
Arg
TCT
[ENA]
¡û
>W1610014423
AOLZ01000033
Euryarchaeota
Halobiforma lacisalsi AJ5 [AOLZ]
1711
1785
+
Arg
TCT
[ENA]
¡û
Identical group No.244741 (3 seq.)
>A171001475
CP002009
Euryarchaeota
Methanocaldococcus infernus ME [CP002009]
279368
279445
+
Arg
TCT
-
¡û
>W1610001150
ACQY01000012
Euryarchaeota
Methanocaldococcus infernus ME [ACQY]
31824
31901
+
Arg
TCT
[ENA]
¡û
>W1610018654
AQUK01000001
Euryarchaeota
Methanocaldococcus villosus KIN24-T80 [AQUK]
455207
455130
-
Arg
TCT
[ENA]
¡û
Identical group No.245527 (1 seq.)
>At0664
CP000780
Euryarchaeota
Methanoregula boonei 6A8 [CP000780]
1993588
1993662
+
Arg
TCT
[Ensembl]
¡û
Identical group No.248061 (5 seq.)
>A171004360
CP008746
Euryarchaeota
Methanosarcina barkeri CM1 [CP008746]
4049066
4049141
+
Arg
TCT
-
¡û
>A171005581
CP009528
Euryarchaeota
Methanosarcina barkeri MS [CP009528]
4071585
4071660
+
Arg
TCT
-
¡û
>A171005630
CP009530
Euryarchaeota
Methanosarcina barkeri 227 [CP009530]
3993398
3993473
+
Arg
TCT
-
¡û
>W1910655372
LZPK01000010
Euryarchaeota
Methanosarcina sp. A14 [LZPK]
34899
34974
+
Arg
TCT
[ENA]
¡û
>W1610048590
BBEF01000001
Euryarchaeota
Methanosarcina barkeri JCM 10043 [BBEF]
100332
100407
+
Arg
TCT
[ENA]
¡û
Identical group No.248066 (1 seq.)
>A171005686
CP009552
Euryarchaeota
Geoglobus acetivorans SBH6 [CP009552]
1136750
1136675
-
Arg
TCT
-
¡û
Identical group No.248082 (9 seq.)
>A178000284
CP002921
Euryarchaeota
Haloarcula hispanica ATCC 33960 CGMCC 1.2049 [CP002921, CP002922]
22451
22555
+
Arg
TCT
-
¡û
>A178000397
CP006884
Euryarchaeota
Haloarcula hispanica N601 [CP006884, CP006885]
22451
22555
+
Arg
TCT
-
¡û
>A178000444
CP008874
Euryarchaeota
Halanaeroarchaeum sulfurireducens HSR2 [CP008874]
2038820
2038925
+
Arg
TCT
-
¡û
>A178000520
CP010529
Euryarchaeota
Haloarcula sp. CBA1115 [CP010529]
1614700
1614804
+
Arg
TCT
-
¡û
>A178000562
CP011564
Euryarchaeota
Halanaeroarchaeum sulfurireducens M27-SA2 [CP011564]
2082696
2082801
+
Arg
TCT
-
¡û
>A179000093
CP001688
Euryarchaeota
Halomicrobium mukohataei DSM 12286 [CP001688]
912487
912590
+
Arg
TCT
-
¡û
>At0762
AY596297
Euryarchaeota
Haloarcula marismortui ATCC 43049 [AY596297, AY596298]
2436991
2437095
+
Arg
TCT
[Ensembl]
¡û
>W1911493162
OBEJ01000003
Euryarchaeota
Natronoarchaeum philippinense DSM 27208 [OBEJ]
492571
492645
+
Arg
TCT
[ENA]
¡û
>W1911749402
QWGG01000002
Euryarchaeota
Halosimplex salinum YPL4 [QWGG]
526222
526148
-
Arg
TCT
[ENA]
¡û
Identical group No.248399 (2 seq.)
>A171000024
AM774415
Euryarchaeota
Halobacterium salinarum R1 DSM 671 [AM774415]
1826893
1826817
-
Arg
TCT
-
¡û
>At0837
AE004437
Euryarchaeota
Halobacterium salinarum NRC-1; ATCC 700922 [AE004437]
1838642
1838568
-
Arg
TCT
[Ensembl]
¡û
Identical group No.250428 (11 seq.)
>A171001456
CP001994
Euryarchaeota
Methanohalophilus mahii DSM 5219 [CP001994]
1815099
1815174
+
Arg
TCT
-
¡û
>A171006819
CP017921
Euryarchaeota
Methanohalophilus halophilus Z-7982 [CP017921]
906803
906728
-
Arg
TCT
-
¡û
>W1910228331
FNMU01000004
Euryarchaeota
Methanohalophilus halophilus Z-7982 [FNMU]
165332
165407
+
Arg
TCT
[ENA]
¡û
>W1910471820
FXBN01000002
Euryarchaeota
Methanohalophilus portucalensis FDF-1 [FXBN]
334215
334290
+
Arg
TCT
[ENA]
¡û
>W1910582993
JWTK01000007
Euryarchaeota
Methanohalophilus portucalensis FDF-1 [JWTK]
9227
9302
+
Arg
TCT
[ENA]
¡û
>W1910672535
MCNQ01000002
Euryarchaeota
Methanohalophilus sp. 2-GBenrich [MCNQ]
93222
93147
-
Arg
TCT
[ENA]
¡û
>W1911492134
OBDR01000005
Euryarchaeota
Methanohalophilus euhalobius WG-1MB [OBDR]
93218
93143
-
Arg
TCT
[ENA]
¡û
>W1911633774
PVBU01000008
Euryarchaeota
Methanohalophilus euhalobius DSM 10369 [PVBU]
2625
2550
-
Arg
TCT
[ENA]
¡û
>W1911653215
QBKB01000002
Euryarchaeota
Methanohalophilus profundi SLHTYRO [QBKB]
1295698
1295623
-
Arg
TCT
[ENA]
¡û
>W1610919886
LSRU01000189
Euryarchaeota
Methanohalophilus sp. T328-1 [LSRU]
1261
1186
-
Arg
TCT
[ENA]
¡û
>W1611052512
MAFX01000049
Euryarchaeota
Methanohalophilus sp. DAL1 [MAFX]
2559
2634
+
Arg
TCT
[ENA]
¡û
Identical group No.250767 (2 seq.)
>A171001205
CP001899
Euryarchaeota
Ferroglobus placidus DSM 10642 [CP001899]
145028
145103
+
Arg
TCT
-
¡û
>W1610001601
ACYZ01000010
Euryarchaeota
Ferroglobus placidus DSM 10642 [ACYZ]
59063
59138
+
Arg
TCT
[ENA]
¡û
Identical group No.250781 (2 seq.)
>A171001775
CP002117
Euryarchaeota
Methanolacinia petrolearia DSM 11571 [CP002117]
1836954
1836878
-
Arg
TCT
-
¡û
>W1610029776
AXDV01000030
Euryarchaeota
Methanolacinia paynteri DSM 2545 [AXDV]
81307
81383
+
Arg
TCT
[ENA]
¡û
Identical group No.250815 (1 seq.)
>A171001745
CP002101
Euryarchaeota
Methanosalsum zhilinae DSM 4017 [CP002101]
108363
108288
-
Arg
TCT
-
¡û
Identical group No.250826 (1 seq.)
>A171006112
CP011267
Euryarchaeota
Geoglobus ahangari 234 [CP011267]
1058818
1058893
+
Arg
TCT
-
¡û
Identical group No.251206 (5 seq.)
>A171005376
CP009518
Euryarchaeota
Methanococcoides methylutens MM1 [CP009518]
2230273
2230349
+
Arg
TCT
-
¡û
>At0970
CP000300
Euryarchaeota
Methanococcoides burtonii DSM 6242 [CP000300]
1631638
1631712
+
Arg
TCT
[Ensembl]
¡û
>W1910229856
FOHQ01000005
Euryarchaeota
Methanococcoides vulcani SLH 33 [FOHQ]
5276
5352
+
Arg
TCT
[ENA]
¡û
>W1910575279
JRHO01000014
Euryarchaeota
Methanococcoides methylutens DSM 2657 [JRHO]
794853
794929
+
Arg
TCT
[ENA]
¡û
>W1610000124
AADH02000002
Euryarchaeota
Methanococcoides burtonii DSM 6242 [AADH]
172463
172539
+
Arg
TCT
[ENA]
¡û
Identical group No.252724 (1 seq.)
>A171002695
CP003050
Euryarchaeota
Halovivax ruber XH-70 [CP003050]
387300
387375
+
Arg
TCT
-
¡û
Identical group No.254663 (1 seq.)
>A171002916
CP003243
Euryarchaeota
Methanocella conradii HZ254 [CP003243]
2200513
2200438
-
Arg
TCT
-
¡û
Identical group No.256103 (3 seq.)
>At1689
CR936257
Euryarchaeota
Natronomonas pharaonis DSM 2160 Gabara [CR936257]
434096
434200
+
Arg
TCT
[Ensembl]
¡û
>W1910006745
BBJP01000013
Euryarchaeota
Halorubrum halophilum B8 [BBJP]
137090
137164
+
Arg
TCT
[ENA]
¡û
>W1910572762
JNFH02000051
Euryarchaeota
Halorubrum saccharovorum H3 [JNFH]
17286
17212
-
Arg
TCT
[ENA]
¡û
Identical group No.256401 (2 seq.)
>At1368
CP000477
Euryarchaeota
Methanothrix thermoacetophila PT [CP000477]
1457298
1457224
-
Arg
TCT
[Ensembl]
¡û
>W1610000225
AAOR01000003
Euryarchaeota
Methanothrix thermoacetophila PT [AAOR]
57405
57327
-
Arg
TCT
[ENA]
¡û
Identical group No.256446 (1 seq.)
>A171001810
CP002278
Euryarchaeota
Methanothermus fervidus DSM 2088 [CP002278]
984571
984496
-
Arg
TCT
-
¡û
Identical group No.256462 (1 seq.)
>A171004720
CP009505
Euryarchaeota
Methanosarcina sp. MTP4 [CP009505]
362248
362323
+
Arg
TCT
-
¡û
Identical group No.256466 (1 seq.)
>A171006399
CP012986
Euryarchaeota
Nanohaloarchaea archaeon SG9 [CP012986]
7876
7950
+
Arg
TCT
-
¡û
Identical group No.256470 (1 seq.)
>A171007217
HE964772
Euryarchaeota
Methanoculleus bourgensis MS2 MS2T [HE964772]
257926
257852
-
Arg
TCT
-
¡û
Identical group No.256483 (1 seq.)
>A178000726
HF582854
Euryarchaeota
Natronomonas moolapensis 8.8.11 [HF582854]
100907
100804
-
Arg
TCT
-
¡û
Identical group No.258381 (1 seq.)
>At1325
AE009439
Euryarchaeota
Methanopyrus kandleri AV19 [AE009439]
1662904
1662827
-
Arg
TCT
[Ensembl]
¡û
Identical group No.259817 (2 seq.)
>A171004201
CP007060
Euryarchaeota
Halobacterium sp. DL1 [CP007060]
47194
47119
-
Arg
TCT
-
¡û
>W1610004164
AGIR01000001
Euryarchaeota
Halobacterium sp. DL1 [AGIR]
464318
464393
+
Arg
TCT
[ENA]
¡û
Identical group No.259885 (1 seq.)
>A178000123
CP001932
Euryarchaeota
Natrialba magadii ATCC 43099 [CP001932]
1829336
1829231
-
Arg
TCT
-
¡û
Identical group No.259888 (1 seq.)
>A178000694
CP019067
Euryarchaeota
Halorientalis sp. IM1011 [CP019067]
1570699
1570802
+
Arg
TCT
-
¡û
Identical group No.261123 (1 seq.)
>A171000057
AP011532
Euryarchaeota
Methanocella paludicola SANAE [AP011532]
1474594
1474669
+
Arg
TCT
-
¡û
Identical group No.262365 (1 seq.)
>A171001619
CP002069
Euryarchaeota
Methanohalobium evestigatum Z-7303 [CP002069]
1898778
1898855
+
Arg
TCT
-
¡û
Identical group No.262377 (1 seq.)
>A171002856
CP003167
Euryarchaeota
Methanoregula formicica SMSP [CP003167]
1011575
1011500
-
Arg
TCT
-
¡û
Identical group No.265352 (2 seq.)
>A171000379
CP001338
Euryarchaeota
Methanosphaerula palustris E1-9c [CP001338]
690971
691045
+
Arg
TCT
-
¡û
>W1610000981
ABZB01000001
Euryarchaeota
Methanosphaerula palustris palustris E1-9c [ABZB]
268239
268313
+
Arg
TCT
[ENA]
¡û
Identical group No.265367 (1 seq.)
>A171003662
CP005290
Euryarchaeota
Archaeoglobus sulfaticallidus PM70-1 [CP005290]
1527993
1528067
+
Arg
TCT
-
¡û
Identical group No.265381 (1 seq.)
>A178000675
CP016804
Euryarchaeota
Halodesulfurarchaeum formicicum HSR6 [CP016804]
2054983
2055088
+
Arg
TCT
-
¡û
Identical group No.268539 (1 seq.)
>A171002128
CP002588
Euryarchaeota
Archaeoglobus veneficus SNP6 [CP002588]
525647
525572
-
Arg
TCT
-
¡û
Identical group No.269515 (1 seq.)
>A171000932
CP001719
Euryarchaeota
Methanobrevibacter ruminantium M1 [CP001719]
2680159
2680234
+
Arg
TCT
-
¡û
Identical group No.269520 (1 seq.)
>A171002765
CP003083
Euryarchaeota
Methanolobus psychrophilus R15 [CP003083]
1532269
1532194
-
Arg
TCT
-
¡û
Identical group No.269533 (1 seq.)
>A178000672
CP016070
Euryarchaeota
Halodesulfurarchaeum formicicum HTSR1 [CP016070]
1941214
1941318
+
Arg
TCT
-
¡û
Identical group No.298874 (30 seq.)
>A171001381
CP001956
Euryarchaeota
Haloferax volcanii DS2 [CP001956]
121223
121297
+
Arg
TCT
-
¡û
>A171006191
CP011947
Euryarchaeota
Haloferax gibbonsii ARA6 [CP011947]
125325
125399
+
Arg
TCT
-
¡û
>W1910193525
CSTE01000001
Euryarchaeota
Haloferax massiliensis Arc-Hr [CSTE]
773507
773581
+
Arg
TCT
[ENA]
¡û
>W1910228420
FNPB01000002
Euryarchaeota
Halobellus clavatus CGMCC 1.10118 [FNPB]
233275
233348
+
Arg
TCT
[ENA]
¡û
>W1910228592
FNVN01000001
Euryarchaeota
Halobellus limi CGMCC 1.10331 [FNVN]
1294570
1294497
-
Arg
TCT
[ENA]
¡û
>W1910229620
FOAD01000002
Euryarchaeota
Haloferax larsenii CDM_5 [FOAD]
247257
247184
-
Arg
TCT
[ENA]
¡û
>W1911629767
PSYS01000001
Euryarchaeota
Haloferax sp. Atlit-47N [PSYS]
1467576
1467502
-
Arg
TCT
[ENA]
¡û
>W1911629800
PSYT01000001
Euryarchaeota
Haloferax sp. Atlit-24N [PSYT]
196117
196191
+
Arg
TCT
[ENA]
¡û
>W1911629891
PSYU01000004
Euryarchaeota
Haloferax sp. Atlit-19N [PSYU]
206187
206261
+
Arg
TCT
[ENA]
¡û
>W1911629946
PSYV01000003
Euryarchaeota
Haloferax sp. Atlit-16N [PSYV]
108601
108527
-
Arg
TCT
[ENA]
¡û
>W1911629963
PSYW01000001
Euryarchaeota
Haloferax sp. Atlit-12N [PSYW]
1345820
1345746
-
Arg
TCT
[ENA]
¡û
>W1911630046
PSYX01000004
Euryarchaeota
Haloferax sp. Atlit-10N [PSYX]
108601
108527
-
Arg
TCT
[ENA]
¡û
>W1911630050
PSYY01000001
Euryarchaeota
Haloferax sp. Atlit-4N [PSYY]
206185
206259
+
Arg
TCT
[ENA]
¡û
>W1911655713
QEQI01000006
Euryarchaeota
Haloferax sp. Atlit-48N [QEQI]
48803
48877
+
Arg
TCT
[ENA]
¡û
>W1911655734
QEQJ01000001
Euryarchaeota
Haloferax sp. Atlit-6N [QEQJ]
1542751
1542677
-
Arg
TCT
[ENA]
¡û
>W1911709479
QPLO01000001
Euryarchaeota
Haloferax sp. Atlit-109R [QPLO]
196117
196191
+
Arg
TCT
[ENA]
¡û
>W1911709528
QPLP01000001
Euryarchaeota
Haloferax sp. Atlit-105R [QPLP]
196117
196191
+
Arg
TCT
[ENA]
¡û
>W1610011537
ANPG01000719
Euryarchaeota
Haloferax sp. BAB-2207 BAB2207 [ANPG]
2134
2207
+
Arg
TCT
[ENA]
¡û
>W1610011840
AOHU01000105
Euryarchaeota
Haloferax volcanii DS2 [AOHU]
127511
127585
+
Arg
TCT
[ENA]
¡û
>W1610013478
AOLD01000033
Euryarchaeota
Haloferax sp. ATCC BAA-646 [AOLD]
1338
1264
-
Arg
TCT
[ENA]
¡û
>W1610013549
AOLE01000025
Euryarchaeota
Haloferax sp. ATCC BAA-645 [AOLE]
96925
96851
-
Arg
TCT
[ENA]
¡û
>W1610013585
AOLF01000031
Euryarchaeota
Haloferax sp. ATCC BAA-644 [AOLF]
134073
134147
+
Arg
TCT
[ENA]
¡û
>W1610013603
AOLG01000008
Euryarchaeota
Haloferax prahovense DSM 18310 [AOLG]
205979
206053
+
Arg
TCT
[ENA]
¡û
>W1610013697
AOLH01000026
Euryarchaeota
Haloferax lucentense DSM 14919 [AOLH]
93337
93263
-
Arg
TCT
[ENA]
¡û
>W1610013734
AOLI01000022
Euryarchaeota
Haloferax larsenii JCM 13917 [AOLI]
2613
2687
+
Arg
TCT
[ENA]
¡û
>W1610013760
AOLJ01000011
Euryarchaeota
Haloferax gibbonsii ATCC 33959 [AOLJ]
739275
739201
-
Arg
TCT
[ENA]
¡û
>W1610013804
AOLK01000011
Euryarchaeota
Haloferax elongans ATCC BAA-1513 [AOLK]
107835
107909
+
Arg
TCT
[ENA]
¡û
>W1610013950
AOLM01000025
Euryarchaeota
Haloferax sulfurifontis ATCC BAA-897 [AOLM]
142104
142177
+
Arg
TCT
[ENA]
¡û
>W1610784319
LOEP01000042
Euryarchaeota
Haloferax sp. Q22 [LOEP]
255
181
-
Arg
TCT
[ENA]
¡û
>W1610799894
LOPW01000056
Euryarchaeota
Haloferax marisrubri SB3 [LOPW]
222403
222329
-
Arg
TCT
[ENA]
¡û
Identical group No.301568 (5 seq.)
>A171006190
CP011947
Euryarchaeota
Haloferax gibbonsii ARA6 [CP011947]
125074
125149
+
Arg
TCT
-
¡û
>W1910186231
CCDK010000002
Euryarchaeota
Haloferax prahovense Arc-Hr [CCDK]
725731
725806
+
Arg
TCT
[ENA]
¡û
>W1910193524
CSTE01000001
Euryarchaeota
Haloferax massiliensis Arc-Hr [CSTE]
773343
773418
+
Arg
TCT
[ENA]
¡û
>W1610013882
AOLL01000013
Euryarchaeota
Haloferax alexandrinus JCM 10717 [AOLL]
225747
225672
-
Arg
TCT
[ENA]
¡û
>W1610014062
AOLP01000009
Euryarchaeota
Haloferax denitrificans ATCC 35960 [AOLP]
221488
221563
+
Arg
TCT
[ENA]
¡û
Identical group No.301892 (27 seq.)
>A171000219
CP000855
Euryarchaeota
Thermococcus onnurineus NA1 [CP000855]
886726
886650
-
Arg
TCT
-
¡û
>A171000506
CP001398
Euryarchaeota
Thermococcus gammatolerans EJ3 EJ3; DSM 15229 [CP001398]
642494
642418
-
Arg
TCT
-
¡û
>A171001888
CP002372
Euryarchaeota
Thermococcus barophilus MP [CP002372]
1054065
1053989
-
Arg
TCT
-
¡û
>A171002165
CP002670
Euryarchaeota
Pyrococcus sp. NA2 [CP002670]
791785
791861
+
Arg
TCT
-
¡û
>A171002301
CP002779
Euryarchaeota
Pyrococcus yayanosii CH1 [CP002779]
1150587
1150663
+
Arg
TCT
-
¡û
>A171002649
CP002952
Euryarchaeota
Thermococcus sp. AM4 [CP002952]
2637
2713
+
Arg
TCT
-
¡û
>A171003259
CP003534
Euryarchaeota
Pyrococcus sp. ST04 [CP003534]
391668
391744
+
Arg
TCT
-
¡û
>A171003322
CP003651
Euryarchaeota
Thermococcus cleftensis CL1 [CP003651]
1625795
1625719
-
Arg
TCT
-
¡û
>A171004058
CP006965
Euryarchaeota
Thermococcus paralvinellae ES1 [CP006965]
1195094
1195018
-
Arg
TCT
-
¡û
>A171004219
CP007140
Euryarchaeota
Thermococcus guaymasensis DSM 11113 [CP007140]
1240646
1240722
+
Arg
TCT
-
¡û
>A171004270
CP007264
Euryarchaeota
Thermococcus nautili 30-1 [CP007264]
541993
542069
+
Arg
TCT
-
¡û
>A171004461
CP008887
Euryarchaeota
Thermococcus eurythermalis A501 [CP008887]
1436294
1436218
-
Arg
TCT
-
¡û
>A171005904
CP010835
Euryarchaeota
Pyrococcus kukulkanii NCB100 [CP010835]
233646
233570
-
Arg
TCT
-
¡û
>A171006488
CP013050
Euryarchaeota
Thermococcus barophilus CH5 [CP013050]
1198340
1198264
-
Arg
TCT
-
¡û
>A171006613
CP014750
Euryarchaeota
Thermococcus peptonophilus OG-1 [CP014750]
361401
361325
-
Arg
TCT
-
¡û
>A171006680
CP015520
Euryarchaeota
Thermococcus piezophilus CDGS [CP015520]
76524
76448
-
Arg
TCT
-
¡û
>A171007101
CP021848
Euryarchaeota
Thermococcus sp. 5-4 [CP021848]
1000411
1000487
+
Arg
TCT
-
¡û
>A171007494
LN999010
Euryarchaeota
Thermococcus chitonophagus [LN999010]
408767
408843
+
Arg
TCT
-
¡û
>At1823
AL096836
Euryarchaeota
Pyrococcus abyssi [AL096836]
1685759
1685683
-
Arg
TCT
[Ensembl]
¡û
>At1916
BA000001
Euryarchaeota
Pyrococcus horikoshii OT3 [BA000001]
1676957
1676881
-
Arg
TCT
[Ensembl]
¡û
>At1921
AP006878
Euryarchaeota
Thermococcus kodakarensis KOD1 [AP006878]
499262
499338
+
Arg
TCT
[Ensembl]
¡û
>W1910229965
FOIW01000001
Euryarchaeota
Thermococcus thioreducens OGL-20 [FOIW]
297676
297752
+
Arg
TCT
[ENA]
¡û
>W1610000731
ABSF01000013
Euryarchaeota
Thermococcus barophilus MP [ABSF]
324093
324169
+
Arg
TCT
[ENA]
¡û
>W1610000881
ABXN01000012
Euryarchaeota
Thermococcus sp. AM4 [ABXN]
2637
2713
+
Arg
TCT
[ENA]
¡û
>W1610045077
BBBB01000007
Euryarchaeota
Thermococcus celer JCM 8558 [BBBB]
84948
85024
+
Arg
TCT
[ENA]
¡û
>W1610046819
BBCU01000002
Euryarchaeota
Thermococcus sp. JCM 11816 [BBCU]
162550
162626
+
Arg
TCT
[ENA]
¡û
>W1610638240
LIXN01000009
Euryarchaeota
Thermococcus thioreducens DSM 14981 [LIXN]
85129
85053
-
Arg
TCT
[ENA]
¡û
Identical group No.338136 (2 seq.)
>A171003561
CP004050
Euryarchaeota
Methanobrevibacter sp. AbM4 [CP004050]
1880640
1880715
+
Arg
TCT
-
¡û
>W1610040617
BAGX02000020
Euryarchaeota
Methanobrevibacter boviskoreani JH1 [BAGX]
183992
184067
+
Arg
TCT
[ENA]
¡û
Identical group No.338232 (1 seq.)
>A171002582
CP002920
Euryarchaeota
Thermococcus sp. 4557 [CP002920]
2007274
2007198
-
Arg
TCT
-
¡û
Identical group No.338236 (1 seq.)
>A171003749
CP005962
Euryarchaeota
Salinarchaeum sp. Harcht-Bsk1 [CP005962]
1954907
1954834
-
Arg
TCT
-
¡û
Identical group No.361345 (3 seq.)
>A171001156
CP001868
Euryarchaeota
Haloferax mediterranei ATCC 33500 CGMCC 1.2087 [CP001868]
136073
136147
+
Arg
TCT
-
¡û
>W1610013976
AOLN01000011
Euryarchaeota
Haloferax mucosum ATCC BAA-1512 [AOLN]
353289
353215
-
Arg
TCT
[ENA]
¡û
>W1610014025
AOLO01000007
Euryarchaeota
Haloferax mediterranei ATCC 33500 [AOLO]
745884
745810
-
Arg
TCT
[ENA]
¡û
Identical group No.372607 (6 seq.)
>A171000851
CP001690
Euryarchaeota
Halogeometricum borinquense DSM 11551 PR 3 [CP001690]
83043
82969
-
Arg
TCT
-
¡û
>W1910230727
FOYT01000001
Euryarchaeota
Halogeometricum rufum CGMCC 1.7736 [FOYT]
247180
247253
+
Arg
TCT
[ENA]
¡û
>W1911709649
QPLR01000003
Euryarchaeota
Halobellus sp. Atlit-31R [QPLR]
345326
345399
+
Arg
TCT
[ENA]
¡û
>W1911769964
QXIJ01000002
Euryarchaeota
Halobellus sp. Atlit-38R [QXIJ]
317167
317240
+
Arg
TCT
[ENA]
¡û
>W1610000770
ABTX01000001
Euryarchaeota
Halogeometricum borinquense DSM 11551 [ABTX]
1289641
1289567
-
Arg
TCT
[ENA]
¡û
>W1610011772
AOHT01000036
Euryarchaeota
Halogeometricum borinquense DSM 11551 [AOHT]
55819
55745
-
Arg
TCT
[ENA]
¡û
Identical group No.391889 (1 seq.)
>A171003773
CP006019
Euryarchaeota
Palaeococcus pacificus DY20341 [CP006019]
938279
938355
+
Arg
TCT
-
¡û
Identical group No.430116 (1 seq.)
>CL171000011
CP002988
Euryarchaeota
halophilic archaeon DL31 [CP002988]
2249241
2249141
-
Arg
TCT
[Ensembl]
¡û
Identical group No.775771 (1 seq.)
>A171000971
CP001719
Euryarchaeota
Methanobrevibacter ruminantium M1 [CP001719]
360811
360740
-
Pseudo
TCT
-
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
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Representative sequence of each cluster
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