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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
Euryarchaeota
Anticodon = TGC
HIT:
34 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.301898 (1 seq.)
>A171006541
CP014265
Euryarchaeota
Methanobrevibacter olleyae YLM1 [CP014265]
275810
275885
+
Ala
TGC
-
¡û
Identical group No.338098 (2 seq.)
>A171001216
CP001899
Euryarchaeota
Ferroglobus placidus DSM 10642 [CP001899]
1405542
1405617
+
Ala
TGC
-
¡û
>W1610001603
ACYZ01000011
Euryarchaeota
Ferroglobus placidus DSM 10642 [ACYZ]
1385
1460
+
Ala
TGC
[ENA]
¡û
Identical group No.349669 (3 seq.)
>A171002023
CP002551
Euryarchaeota
Methanobacterium lacus AL-21 [CP002551]
492028
492105
+
Ala
TGC
-
¡û
>A171002043
CP002551
Euryarchaeota
Methanobacterium lacus AL-21 [CP002551]
1543960
1543883
-
Ala
TGC
-
¡û
>W1910575110
JQLY01000001
Euryarchaeota
Methanobacterium sp. SMA-27 [JQLY]
1949081
1949004
-
Ala
TGC
[ENA]
¡û
Identical group No.372612 (2 seq.)
>A171001797
CP002278
Euryarchaeota
Methanothermus fervidus DSM 2088 [CP002278]
769516
769591
+
Ala
TGC
-
¡û
>A171001827
CP002278
Euryarchaeota
Methanothermus fervidus DSM 2088 [CP002278]
26933
26858
-
Ala
TGC
-
¡û
Identical group No.372672 (1 seq.)
>A179000644
CP012986
Euryarchaeota
Nanohaloarchaea archaeon SG9 [CP012986]
2743
2593
-
Ala
TGC
-
¡û
Identical group No.382808 (1 seq.)
>At1297
AE009439
Euryarchaeota
Methanopyrus kandleri AV19 [AE009439]
464925
465001
+
Ala
TGC
[Ensembl]
¡û
Identical group No.415933 (2 seq.)
>A171002678
CP002952
Euryarchaeota
Thermococcus sp. AM4 [CP002952]
1347854
1347778
-
Ala
TGC
-
¡û
>W1610000889
ABXN01000014
Euryarchaeota
Thermococcus sp. AM4 [ABXN]
103638
103714
+
Ala
TGC
[ENA]
¡û
Identical group No.506584 (4 seq.)
>A173000068
CP002565
Euryarchaeota
Methanothrix soehngenii GP6 [CP002565]
292981
293053
+
Ala
TGC
-
¡û
>A173000069
CP002565
Euryarchaeota
Methanothrix soehngenii GP6 [CP002565]
838293
838365
+
Ala
TGC
-
¡û
>W1630018543
LUYG01000067
Euryarchaeota
Methanosarcinales archaeon Methan_03 [LUYG]
2089
2017
-
Ala
TGC
[ENA]
¡û
>W1630018551
LUYH01000066
Euryarchaeota
Methanosarcinales archaeon Methan_04 [LUYH]
8495
8423
-
Ala
TGC
[ENA]
¡û
Identical group No.507972 (2 seq.)
>A171003646
CP005290
Euryarchaeota
Archaeoglobus sulfaticallidus PM70-1 [CP005290]
661833
661907
+
Ala
TGC
-
¡û
>A171005679
CP009552
Euryarchaeota
Geoglobus acetivorans SBH6 [CP009552]
1384565
1384491
-
Ala
TGC
-
¡û
Identical group No.526117 (3 seq.)
>A171001750
CP002117
Euryarchaeota
Methanolacinia petrolearia DSM 11571 [CP002117]
741701
741773
+
Ala
TGC
-
¡û
>A171001769
CP002117
Euryarchaeota
Methanolacinia petrolearia DSM 11571 [CP002117]
2355510
2355438
-
Ala
TGC
-
¡û
>W1610029781
AXDV01000044
Euryarchaeota
Methanolacinia paynteri DSM 2545 [AXDV]
1891
1963
+
Ala
TGC
[ENA]
¡û
Identical group No.526139 (4 seq.)
>A171003559
CP004050
Euryarchaeota
Methanobrevibacter sp. AbM4 [CP004050]
768343
768416
+
Ala
TGC
-
¡û
>A171003571
CP004050
Euryarchaeota
Methanobrevibacter sp. AbM4 [CP004050]
1661995
1661921
-
Ala
TGC
-
¡û
>W1610040640
BAGX02000047
Euryarchaeota
Methanobrevibacter boviskoreani JH1 [BAGX]
118
191
+
Ala
TGC
[ENA]
¡û
>W1610040641
BAGX02000053
Euryarchaeota
Methanobrevibacter boviskoreani JH1 [BAGX]
104
30
-
Ala
TGC
[ENA]
¡û
Identical group No.526246 (1 seq.)
>A171006144
CP011267
Euryarchaeota
Geoglobus ahangari 234 [CP011267]
397588
397514
-
Ala
TGC
-
¡û
Identical group No.528527 (6 seq.)
>At0971
CP000300
Euryarchaeota
Methanococcoides burtonii DSM 6242 [CP000300]
1878206
1878278
+
Ala
TGC
[Ensembl]
¡û
>At0980
CP000300
Euryarchaeota
Methanococcoides burtonii DSM 6242 [CP000300]
2480194
2480266
+
Ala
TGC
[Ensembl]
¡û
>At0994
CP000300
Euryarchaeota
Methanococcoides burtonii DSM 6242 [CP000300]
1022017
1021945
-
Ala
TGC
[Ensembl]
¡û
>W1610000138
AADH02000008
Euryarchaeota
Methanococcoides burtonii DSM 6242 [AADH]
96400
96472
+
Ala
TGC
[ENA]
¡û
>W1610000143
AADH02000011
Euryarchaeota
Methanococcoides burtonii DSM 6242 [AADH]
49378
49306
-
Ala
TGC
[ENA]
¡û
>W1610000159
AADH02000023
Euryarchaeota
Methanococcoides burtonii DSM 6242 [AADH]
17996
18068
+
Ala
TGC
[ENA]
¡û
Identical group No.538376 (2 seq.)
>At1171
CP000742
Euryarchaeota
Methanococcus vannielii SB [CP000742]
1215120
1215192
+
Ala
TGC
[Ensembl]
¡û
>W1610000379
AAWX01000004
Euryarchaeota
Methanococcus vannielii SB [AAWX]
157035
157108
+
Ala
TGC
[ENA]
¡û
Identical group No.551673 (2 seq.)
>A171002898
CP003243
Euryarchaeota
Methanocella conradii HZ254 [CP003243]
516253
516328
+
Ala
TGC
-
¡û
>A171002926
CP003243
Euryarchaeota
Methanocella conradii HZ254 [CP003243]
1677685
1677610
-
Ala
TGC
-
¡û
Identical group No.562787 (3 seq.)
>At1339
CP000477
Euryarchaeota
Methanothrix thermoacetophila PT [CP000477]
847061
847133
+
Ala
TGC
[Ensembl]
¡û
>At1371
CP000477
Euryarchaeota
Methanothrix thermoacetophila PT [CP000477]
1617131
1617059
-
Ala
TGC
[Ensembl]
¡û
>W1630000027
AAOR01000001
Euryarchaeota
Methanothrix thermoacetophila PT [AAOR]
83587
83661
+
Ala
TGC
[ENA]
¡û
Identical group No.563650 (1 seq.)
>A171007183
HE964772
Euryarchaeota
Methanoculleus bourgensis MS2 MS2T [HE964772]
566597
566670
+
Ala
TGC
-
¡û
Identical group No.594121 (2 seq.)
>A171000044
AP011532
Euryarchaeota
Methanocella paludicola SANAE [AP011532]
108223
108296
+
Ala
TGC
-
¡û
>A171000078
AP011532
Euryarchaeota
Methanocella paludicola SANAE [AP011532]
1524875
1524802
-
Ala
TGC
-
¡û
Identical group No.603265 (2 seq.)
>A171001605
CP002069
Euryarchaeota
Methanohalobium evestigatum Z-7303 [CP002069]
50229
50302
+
Ala
TGC
-
¡û
>A171001626
CP002069
Euryarchaeota
Methanohalobium evestigatum Z-7303 [CP002069]
1743838
1743765
-
Ala
TGC
-
¡û
Identical group No.640510 (1 seq.)
>A171002096
CP002588
Euryarchaeota
Archaeoglobus veneficus SNP6 [CP002588]
801204
801278
+
Ala
TGC
-
¡û
Identical group No.647519 (2 seq.)
>A171000927
CP001719
Euryarchaeota
Methanobrevibacter ruminantium M1 [CP001719]
762489
762564
+
Ala
TGC
-
¡û
>A171000953
CP001719
Euryarchaeota
Methanobrevibacter ruminantium M1 [CP001719]
2041705
2041631
-
Ala
TGC
-
¡û
Identical group No.647525 (1 seq.)
>A171000970
CP001719
Euryarchaeota
Methanobrevibacter ruminantium M1 [CP001719]
360888
360813
-
Ala
TGC
-
¡û
Identical group No.647531 (1 seq.)
>A171005202
CP009515
Euryarchaeota
Methanosarcina lacustris Z-7289 [CP009515]
1746550
1746622
+
Ala
TGC
-
¡û
Identical group No.655440 (8 seq.)
>A171000424
CP001365
Euryarchaeota
Halorubrum lacusprofundi ATCC 49239 [CP001365, CP001366]
22223
22296
+
Ala
TGC
-
¡û
>A171000459
CP001365
Euryarchaeota
Halorubrum lacusprofundi ATCC 49239 [CP001365, CP001366]
1538480
1538407
-
Ala
TGC
-
¡û
>A171000470
CP001366
Euryarchaeota
Halorubrum lacusprofundi ATCC 49239 [CP001365, CP001366]
162934
163007
+
Ala
TGC
-
¡û
>W1910749518
MJCD01000044
Euryarchaeota
Halorubrum lacusprofundi HLS1 [MJCD]
3538
3465
-
Ala
TGC
[ENA]
¡û
>W1910752272
MKFG01000106
Euryarchaeota
Halorubrum lacusprofundi DL18 [MKFG]
268
341
+
Ala
TGC
[ENA]
¡û
>W1910752273
MKFG01000107
Euryarchaeota
Halorubrum lacusprofundi DL18 [MKFG]
268
341
+
Ala
TGC
[ENA]
¡û
>W1610000514
ABEB01000004
Euryarchaeota
Halorubrum lacusprofundi ATCC 49239 [ABEB]
493
566
+
Ala
TGC
[ENA]
¡û
>W1610013190
AOJJ01000012
Euryarchaeota
Halorubrum arcis JCM 13916 [AOJJ]
1295
1368
+
Ala
TGC
[ENA]
¡û
Identical group No.655453 (105 seq.)
>A171001115
CP001860
Euryarchaeota
Haloterrigena turkmenica DSM 5511 [CP001860]
515091
515164
+
Ala
TGC
-
¡û
>A171001126
CP001860
Euryarchaeota
Haloterrigena turkmenica DSM 5511 [CP001860]
1945604
1945677
+
Ala
TGC
-
¡û
>A171001138
CP001860
Euryarchaeota
Haloterrigena turkmenica DSM 5511 [CP001860]
3693783
3693710
-
Ala
TGC
-
¡û
>A171001165
CP001868
Euryarchaeota
Haloferax mediterranei ATCC 33500 CGMCC 1.2087 [CP001868]
1747445
1747516
+
Ala
TGC
-
¡û
>A171001174
CP001868
Euryarchaeota
Haloferax mediterranei ATCC 33500 CGMCC 1.2087 [CP001868]
2840053
2839982
-
Ala
TGC
-
¡û
>A171001389
CP001956
Euryarchaeota
Haloferax volcanii DS2 [CP001956]
1599762
1599833
+
Ala
TGC
-
¡û
>A171001404
CP001956
Euryarchaeota
Haloferax volcanii DS2 [CP001956]
2770065
2769994
-
Ala
TGC
-
¡û
>A171003036
CP003372
Euryarchaeota
Natrinema pellirubrum DSM 15624 [CP003372]
226519
226592
+
Ala
TGC
-
¡û
>A171003068
CP003372
Euryarchaeota
Natrinema pellirubrum DSM 15624 [CP003372]
3342439
3342366
-
Ala
TGC
-
¡û
>A171003074
CP003372
Euryarchaeota
Natrinema pellirubrum DSM 15624 [CP003372]
2199494
2199421
-
Ala
TGC
-
¡û
>A171003178
CP003412
Euryarchaeota
Natrinema sp. J7-2 [CP003412]
2542878
2542805
-
Ala
TGC
-
¡û
>A171003193
CP003412
Euryarchaeota
Natrinema sp. J7-2 [CP003412]
442
369
-
Ala
TGC
-
¡û
>A171004136
CP007055
Euryarchaeota
Halostagnicola larsenii XH-48 [CP007055]
1412982
1413055
+
Ala
TGC
-
¡û
>A171004147
CP007055
Euryarchaeota
Halostagnicola larsenii XH-48 [CP007055]
2554953
2554880
-
Ala
TGC
-
¡û
>A171006200
CP011947
Euryarchaeota
Haloferax gibbonsii ARA6 [CP011947]
1619882
1619953
+
Ala
TGC
-
¡û
>A171006214
CP011947
Euryarchaeota
Haloferax gibbonsii ARA6 [CP011947]
2862072
2862001
-
Ala
TGC
-
¡û
>A171006954
CP019327
Euryarchaeota
Natronorubrum daqingense JX313 [CP019327]
1053717
1053790
+
Ala
TGC
-
¡û
>A171006971
CP019327
Euryarchaeota
Natronorubrum daqingense JX313 [CP019327]
2667194
2667121
-
Ala
TGC
-
¡û
>PL191000882
CP031304
Euryarchaeota
Haloterrigena jeotgali A29 plasmid:unnamed6 (CP031304)
669765
669692
-
Ala
TGC
[ENA]
¡û
>PL191000892
CP031309
Euryarchaeota
Natronorubrum bangense JCM 10635 plasmid:unnamed4 (CP031309)
29376
29449
+
Ala
TGC
[ENA]
¡û
>PL191000893
CP031309
Euryarchaeota
Natronorubrum bangense JCM 10635 plasmid:unnamed4 (CP031309)
111388
111315
-
Ala
TGC
[ENA]
¡û
>W1910186211
CCDK010000001
Euryarchaeota
Haloferax prahovense Arc-Hr [CCDK]
2060
2131
+
Ala
TGC
[ENA]
¡û
>W1910186237
CCDK010000002
Euryarchaeota
Haloferax prahovense Arc-Hr [CCDK]
517627
517556
-
Ala
TGC
[ENA]
¡û
>W1910186260
CCDK010000006
Euryarchaeota
Haloferax prahovense Arc-Hr [CCDK]
13872
13943
+
Ala
TGC
[ENA]
¡û
>W1910193559
CSTE01000002
Euryarchaeota
Haloferax massiliensis Arc-Hr [CSTE]
382199
382128
-
Ala
TGC
[ENA]
¡û
>W1910229316
FNWL01000001
Euryarchaeota
Natronorubrum sediminis CGMCC 1.8981 [FNWL]
3476
3403
-
Ala
TGC
[ENA]
¡û
>W1910229317
FNWL01000002
Euryarchaeota
Natronorubrum sediminis CGMCC 1.8981 [FNWL]
1878
1951
+
Ala
TGC
[ENA]
¡û
>W1910229335
FNWL01000003
Euryarchaeota
Natronorubrum sediminis CGMCC 1.8981 [FNWL]
1878
1951
+
Ala
TGC
[ENA]
¡û
>W1910229347
FNWL01000004
Euryarchaeota
Natronorubrum sediminis CGMCC 1.8981 [FNWL]
3476
3403
-
Ala
TGC
[ENA]
¡û
>W1910229646
FOAD01000018
Euryarchaeota
Haloferax larsenii CDM_5 [FOAD]
1816
1887
+
Ala
TGC
[ENA]
¡û
>W1910230831
FOZS01000001
Euryarchaeota
Halostagnicola kamekurae DSM 22427 [FOZS]
1497085
1497158
+
Ala
TGC
[ENA]
¡û
>W1910230846
FOZS01000001
Euryarchaeota
Halostagnicola kamekurae DSM 22427 [FOZS]
1690
1617
-
Ala
TGC
[ENA]
¡û
>W1910340523
FTNP01000012
Euryarchaeota
Natronorubrum daqingense CGMCC 1.8909 [FTNP]
3476
3403
-
Ala
TGC
[ENA]
¡û
>W1910340568
FTNR01000046
Euryarchaeota
Natronorubrum thiooxidans type strain: HArc- [FTNR]
3410
3337
-
Ala
TGC
[ENA]
¡û
>W1910568510
JDTG01000011
Euryarchaeota
Natrinema thermotolerans A29 [JDTG]
10385
10458
+
Ala
TGC
[ENA]
¡û
>W1910569065
JHUT02000003
Euryarchaeota
Natrinema mahii H13 [JHUT]
396230
396303
+
Ala
TGC
[ENA]
¡û
>W1910569085
JHUT02000014
Euryarchaeota
Natrinema mahii H13 [JHUT]
1792
1865
+
Ala
TGC
[ENA]
¡û
>W1910572581
JMIP02000023
Euryarchaeota
Halostagnicola sp. A56 [JMIP]
35511
35438
-
Ala
TGC
[ENA]
¡û
>W1910572735
JNCS01000019
Euryarchaeota
Natrinema altunense AJ2 [JNCS]
1783
1856
+
Ala
TGC
[ENA]
¡û
>W1910573487
JPES01000081
Euryarchaeota
Haloferax sp. ATB1 [JPES]
12174
12103
-
Ala
TGC
[ENA]
¡û
>W1910583032
JXAN01000167
Euryarchaeota
Natrinema altunense 1A4-DGR [JXAN]
350
277
-
Ala
TGC
[ENA]
¡û
>W1910646104
LWLN01000001
Euryarchaeota
Natrinema saccharevitans AB14 [LWLN]
11858
11931
+
Ala
TGC
[ENA]
¡û
>W1910646128
LWLN01000001
Euryarchaeota
Natrinema saccharevitans AB14 [LWLN]
3466275
3466348
+
Ala
TGC
[ENA]
¡û
>W1910646134
LWLN01000001
Euryarchaeota
Natrinema saccharevitans AB14 [LWLN]
2804992
2804919
-
Ala
TGC
[ENA]
¡û
>W1910646140
LWLN01000001
Euryarchaeota
Natrinema saccharevitans AB14 [LWLN]
1718549
1718476
-
Ala
TGC
[ENA]
¡û
>W1910646150
LWLN01000002
Euryarchaeota
Natrinema saccharevitans AB14 [LWLN]
259878
259951
+
Ala
TGC
[ENA]
¡û
>W1910696303
MEIH01000371
Euryarchaeota
Haladaptatus sp. W1 [MEIH]
1107
1036
-
Ala
TGC
[ENA]
¡û
>W1911433972
NXNI01000001
Euryarchaeota
Natrinema ejinorense JCM 13890 [NXNI]
1298067
1298140
+
Ala
TGC
[ENA]
¡û
>W1911433985
NXNI01000001
Euryarchaeota
Natrinema ejinorense JCM 13890 [NXNI]
3731157
3731230
+
Ala
TGC
[ENA]
¡û
>W1911433994
NXNI01000001
Euryarchaeota
Natrinema ejinorense JCM 13890 [NXNI]
2739127
2739054
-
Ala
TGC
[ENA]
¡û
>W1911493169
OBEJ01000011
Euryarchaeota
Natronoarchaeum philippinense DSM 27208 [OBEJ]
3550
3477
-
Ala
TGC
[ENA]
¡û
>W1911572214
PDBS01000001
Euryarchaeota
Natrinema sp. CBA1119 [PDBS]
1760017
1760090
+
Ala
TGC
[ENA]
¡û
>W1911572225
PDBS01000001
Euryarchaeota
Natrinema sp. CBA1119 [PDBS]
3912626
3912553
-
Ala
TGC
[ENA]
¡û
>W1911572240
PDBS01000001
Euryarchaeota
Natrinema sp. CBA1119 [PDBS]
981513
981440
-
Ala
TGC
[ENA]
¡û
>W1911629798
PSYS01000008
Euryarchaeota
Haloferax sp. Atlit-47N [PSYS]
1983
2054
+
Ala
TGC
[ENA]
¡û
>W1911629847
PSYT01000007
Euryarchaeota
Haloferax sp. Atlit-24N [PSYT]
1988
2059
+
Ala
TGC
[ENA]
¡û
>W1911629897
PSYU01000010
Euryarchaeota
Haloferax sp. Atlit-19N [PSYU]
3514
3443
-
Ala
TGC
[ENA]
¡û
>W1911629948
PSYV01000009
Euryarchaeota
Haloferax sp. Atlit-16N [PSYV]
1810
1881
+
Ala
TGC
[ENA]
¡û
>W1911629998
PSYW01000011
Euryarchaeota
Haloferax sp. Atlit-12N [PSYW]
2035
2106
+
Ala
TGC
[ENA]
¡û
>W1911630048
PSYX01000017
Euryarchaeota
Haloferax sp. Atlit-10N [PSYX]
1810
1881
+
Ala
TGC
[ENA]
¡û
>W1911630097
PSYY01000022
Euryarchaeota
Haloferax sp. Atlit-4N [PSYY]
2036
2107
+
Ala
TGC
[ENA]
¡û
>W1911655715
QEQI01000009
Euryarchaeota
Haloferax sp. Atlit-48N [QEQI]
1983
2054
+
Ala
TGC
[ENA]
¡û
>W1911655768
QEQJ01000011
Euryarchaeota
Haloferax sp. Atlit-6N [QEQJ]
2036
2107
+
Ala
TGC
[ENA]
¡û
>W1911709526
QPLO01000006
Euryarchaeota
Haloferax sp. Atlit-109R [QPLO]
1988
2059
+
Ala
TGC
[ENA]
¡û
>W1911709575
QPLP01000008
Euryarchaeota
Haloferax sp. Atlit-105R [QPLP]
1988
2059
+
Ala
TGC
[ENA]
¡û
>W1911717802
QQRR01000006
Euryarchaeota
Haloprofundus halophilus NK23 [QQRR]
3565
3491
-
Ala
TGC
[ENA]
¡û
>W1911718012
QQTY01000008
Euryarchaeota
Natronorubrum halophilum SHR37 [QQTY]
3480
3407
-
Ala
TGC
[ENA]
¡û
>W1610002996
AEMG01000031
Euryarchaeota
Haladaptatus paucihalophilus DX253 [AEMG]
129
58
-
Ala
TGC
[ENA]
¡û
>W1610004138
AGIN01000011
Euryarchaeota
Natrinema pellirubrum DSM 15624 [AGIN]
311
384
+
Ala
TGC
[ENA]
¡û
>W1610011538
ANPG01000769
Euryarchaeota
Haloferax sp. BAB-2207 BAB2207 [ANPG]
565
494
-
Ala
TGC
[ENA]
¡û
>W1610011837
AOHU01000104
Euryarchaeota
Haloferax volcanii DS2 [AOHU]
40407
40336
-
Ala
TGC
[ENA]
¡û
>W1610011892
AOHW01000002
Euryarchaeota
Natronorubrum tibetense GA33 [AOHW]
85013
85088
+
Ala
TGC
[ENA]
¡û
>W1610011969
AOHX01000046
Euryarchaeota
Natronorubrum sulfidifaciens JCM 14089 [AOHX]
2474
2401
-
Ala
TGC
[ENA]
¡û
>W1610011997
AOHY01000010
Euryarchaeota
Natronorubrum bangense JCM 10635 [AOHY]
655
582
-
Ala
TGC
[ENA]
¡û
>W1610012232
AOID01000070
Euryarchaeota
Natrinema versiforme JCM 10478 [AOID]
990
1063
+
Ala
TGC
[ENA]
¡û
>W1610012242
AOIE01000015
Euryarchaeota
Natrinema pellirubrum DSM 15624 [AOIE]
128
55
-
Ala
TGC
[ENA]
¡û
>W1610012318
AOII01000104
Euryarchaeota
Natrinema pallidum DSM 3751 [AOII]
606
533
-
Ala
TGC
[ENA]
¡û
>W1610012319
AOII01000104
Euryarchaeota
Natrinema pallidum DSM 3751 [AOII]
283
210
-
Ala
TGC
[ENA]
¡û
>W1610012343
AOIJ01000050
Euryarchaeota
Natrinema gari JCM 14663 [AOIJ]
580
507
-
Ala
TGC
[ENA]
¡û
>W1610012408
AOIK01000040
Euryarchaeota
Natrinema altunense JCM 12890 [AOIK]
17
90
+
Ala
TGC
[ENA]
¡û
>W1610012664
AOIR01000029
Euryarchaeota
Natrinema thermotolerans DSM 11522 [AOIR]
69
142
+
Ala
TGC
[ENA]
¡û
>W1610012719
AOIS01000019
Euryarchaeota
Haloterrigena salina JCM 13891 [AOIS]
68488
68563
+
Ala
TGC
[ENA]
¡û
>W1610012720
AOIS01000020
Euryarchaeota
Haloterrigena salina JCM 13891 [AOIS]
148
223
+
Ala
TGC
[ENA]
¡û
>W1610013450
AOLD01000003
Euryarchaeota
Haloferax sp. ATCC BAA-646 [AOLD]
44
115
+
Ala
TGC
[ENA]
¡û
>W1610013550
AOLE01000027
Euryarchaeota
Haloferax sp. ATCC BAA-645 [AOLE]
44
115
+
Ala
TGC
[ENA]
¡û
>W1610013582
AOLF01000030
Euryarchaeota
Haloferax sp. ATCC BAA-644 [AOLF]
587
516
-
Ala
TGC
[ENA]
¡û
>W1610013628
AOLG01000044
Euryarchaeota
Haloferax prahovense DSM 18310 [AOLG]
1073
1144
+
Ala
TGC
[ENA]
¡û
>W1610013698
AOLH01000027
Euryarchaeota
Haloferax lucentense DSM 14919 [AOLH]
63697
63768
+
Ala
TGC
[ENA]
¡û
>W1610013733
AOLI01000021
Euryarchaeota
Haloferax larsenii JCM 13917 [AOLI]
192
121
-
Ala
TGC
[ENA]
¡û
>W1610013768
AOLJ01000012
Euryarchaeota
Haloferax gibbonsii ATCC 33959 [AOLJ]
100036
100107
+
Ala
TGC
[ENA]
¡û
>W1610013830
AOLK01000021
Euryarchaeota
Haloferax elongans ATCC BAA-1513 [AOLK]
169
240
+
Ala
TGC
[ENA]
¡û
>W1610013853
AOLK01000025
Euryarchaeota
Haloferax elongans ATCC BAA-1513 [AOLK]
85
14
-
Ala
TGC
[ENA]
¡û
>W1610013884
AOLL01000014
Euryarchaeota
Haloferax alexandrinus JCM 10717 [AOLL]
74459
74530
+
Ala
TGC
[ENA]
¡û
>W1610013926
AOLM01000015
Euryarchaeota
Haloferax sulfurifontis ATCC BAA-897 [AOLM]
2036
2107
+
Ala
TGC
[ENA]
¡û
>W1610013988
AOLN01000016
Euryarchaeota
Haloferax mucosum ATCC BAA-1512 [AOLN]
1983
2054
+
Ala
TGC
[ENA]
¡û
>W1610014032
AOLO01000008
Euryarchaeota
Haloferax mediterranei ATCC 33500 [AOLO]
2037
2108
+
Ala
TGC
[ENA]
¡û
>W1610014084
AOLP01000013
Euryarchaeota
Haloferax denitrificans ATCC 35960 [AOLP]
2025
2096
+
Ala
TGC
[ENA]
¡û
>W1610018842
AQXI01000001
Euryarchaeota
Haladaptatus paucihalophilus DX253 [AQXI]
2130334
2130405
+
Ala
TGC
[ENA]
¡û
>W1610019003
ARPH01000001
Euryarchaeota
Natronorubrum tibetense GA33 [ARPH]
743
668
-
Ala
TGC
[ENA]
¡û
>W1610019012
ARPH01000003
Euryarchaeota
Natronorubrum tibetense GA33 [ARPH]
1224
1149
-
Ala
TGC
[ENA]
¡û
>W1610019018
ARPH01000004
Euryarchaeota
Natronorubrum tibetense GA33 [ARPH]
626977
627052
+
Ala
TGC
[ENA]
¡û
>W1610784320
LOEP01000048
Euryarchaeota
Haloferax sp. Q22 [LOEP]
1232
1161
-
Ala
TGC
[ENA]
¡û
>W1610799776
LOPU01000006
Euryarchaeota
Haloprofundus marisrubri SB9 [LOPU]
504
578
+
Ala
TGC
[ENA]
¡û
>W1610799822
LOPV01000001
Euryarchaeota
Haloferax profundi SB29 [LOPV]
2034
2105
+
Ala
TGC
[ENA]
¡û
>W1610799868
LOPW01000007
Euryarchaeota
Haloferax marisrubri SB3 [LOPW]
587
516
-
Ala
TGC
[ENA]
¡û
Identical group No.655461 (16 seq.)
>A171002609
CP002921
Euryarchaeota
Haloarcula hispanica ATCC 33960 CGMCC 1.2049 [CP002921, CP002922]
214741
214812
+
Ala
TGC
-
¡û
>A171003942
CP006884
Euryarchaeota
Haloarcula hispanica N601 [CP006884, CP006885]
227142
227213
+
Ala
TGC
-
¡û
>A171005799
CP010529
Euryarchaeota
Haloarcula sp. CBA1115 [CP010529]
1822695
1822766
+
Ala
TGC
-
¡û
>At0765
AY596297
Euryarchaeota
Haloarcula marismortui ATCC 43049 [AY596297, AY596298]
2633932
2634003
+
Ala
TGC
[Ensembl]
¡û
>W1910175091
BIXZ01000001
Euryarchaeota
Haloarcula mannanilytica MD-130 MD130-1 [BIXZ]
1400237
1400166
-
Ala
TGC
[ENA]
¡û
>W1910228403
FNOF01000017
Euryarchaeota
Haloarcula vallismortis DSM 3756 [FNOF]
72030
72101
+
Ala
TGC
[ENA]
¡û
>W1910617613
LIUF01000006
Euryarchaeota
Haloarcula rubripromontorii SL3 [LIUF]
161152
161081
-
Ala
TGC
[ENA]
¡û
>W1610014135
AOLQ01000031
Euryarchaeota
Haloarcula vallismortis ATCC 29715 [AOLQ]
129
58
-
Ala
TGC
[ENA]
¡û
>W1610014183
AOLR01000014
Euryarchaeota
Haloarcula sinaiiensis ATCC 33800 [AOLR]
31372
31443
+
Ala
TGC
[ENA]
¡û
>W1610014248
AOLS01000114
Euryarchaeota
Haloarcula californiae ATCC 33799 [AOLS]
123
194
+
Ala
TGC
[ENA]
¡û
>W1610014285
AOLW01000042
Euryarchaeota
Haloarcula amylolytica JCM 13557 [AOLW]
427
356
-
Ala
TGC
[ENA]
¡û
>W1610014359
AOLX01000033
Euryarchaeota
Haloarcula argentinensis DSM 12282 [AOLX]
727
656
-
Ala
TGC
[ENA]
¡û
>W1610014383
AOLY01000013
Euryarchaeota
Haloarcula japonica DSM 6131 [AOLY]
1117
1046
-
Ala
TGC
[ENA]
¡û
>W1610061907
BCNA01000001
Euryarchaeota
Haloarcula sp. CBA1128 [BCNA]
2541044
2541115
+
Ala
TGC
[ENA]
¡û
>W1610061971
BCNB01000006
Euryarchaeota
Haloarcula sp. CBA1127 [BCNB]
352477
352406
-
Ala
TGC
[ENA]
¡û
>W1610881029
LRHL01000027
Euryarchaeota
Haloarcula sp. K1 [LRHL]
957
1028
+
Ala
TGC
[ENA]
¡û
Identical group No.655472 (11 seq.)
>A171000797
CP001688
Euryarchaeota
Halomicrobium mukohataei DSM 12286 [CP001688]
618367
618296
-
Ala
TGC
-
¡û
>A171000806
CP001690
Euryarchaeota
Halogeometricum borinquense DSM 11551 PR 3 [CP001690]
304309
304380
+
Ala
TGC
-
¡û
>A171000841
CP001690
Euryarchaeota
Halogeometricum borinquense DSM 11551 PR 3 [CP001690]
1377983
1377912
-
Ala
TGC
-
¡û
>W1910230725
FOYS01000008
Euryarchaeota
Halogeometricum limi CGMCC 1.8711 [FOYS]
71542
71471
-
Ala
TGC
[ENA]
¡û
>W1910230823
FOZK01000005
Euryarchaeota
Halomicrobium zhouii CGMCC 1.10457 [FOZK]
256507
256578
+
Ala
TGC
[ENA]
¡û
>W1911682216
QKMU01000001
Euryarchaeota
Halogeometricum sp. wsp3 [QKMU]
2576772
2576843
+
Ala
TGC
[ENA]
¡û
>W1610000750
ABTX01000001
Euryarchaeota
Halogeometricum borinquense DSM 11551 [ABTX]
1511502
1511573
+
Ala
TGC
[ENA]
¡û
>W1610000805
ABTY01000001
Euryarchaeota
Halomicrobium mukohataei DSM 12286 [ABTY]
3109008
3109079
+
Ala
TGC
[ENA]
¡û
>W1610005922
ALJD01000016
Euryarchaeota
Halogranum salarium B-1 [ALJD]
1837
1910
+
Ala
TGC
[ENA]
¡û
>W1610011766
AOHT01000014
Euryarchaeota
Halogeometricum borinquense DSM 11551 [AOHT]
839
768
-
Ala
TGC
[ENA]
¡û
>W1610018965
AQZY01000004
Euryarchaeota
Halomicrobium katesii DSM 19301 [AQZY]
373025
372954
-
Ala
TGC
[ENA]
¡û
Identical group No.655522 (34 seq.)
>A171002452
CP002839
Euryarchaeota
Halopiger xanaduensis SH-6 [CP002839]
1301641
1301714
+
Ala
TGC
-
¡û
>A171002456
CP002839
Euryarchaeota
Halopiger xanaduensis SH-6 [CP002839]
2728993
2729066
+
Ala
TGC
-
¡û
>A171002480
CP002839
Euryarchaeota
Halopiger xanaduensis SH-6 [CP002839]
426103
426030
-
Ala
TGC
-
¡û
>A171002693
CP003050
Euryarchaeota
Halovivax ruber XH-70 [CP003050]
199881
199954
+
Ala
TGC
-
¡û
>A171002724
CP003050
Euryarchaeota
Halovivax ruber XH-70 [CP003050]
1767424
1767351
-
Ala
TGC
-
¡û
>A171003096
CP003377
Euryarchaeota
Natronobacterium gregoryi SP2 [CP003377]
1819572
1819645
+
Ala
TGC
-
¡û
>A171003107
CP003377
Euryarchaeota
Natronobacterium gregoryi SP2 [CP003377]
3747500
3747427
-
Ala
TGC
-
¡û
>A171003116
CP003377
Euryarchaeota
Natronobacterium gregoryi SP2 [CP003377]
1332814
1332741
-
Ala
TGC
-
¡û
>A171006911
CP019285
Euryarchaeota
Halobiforma lacisalsi AJ5 [CP019285]
1272655
1272728
+
Ala
TGC
-
¡û
>A171006933
CP019285
Euryarchaeota
Halobiforma lacisalsi AJ5 [CP019285]
3028288
3028215
-
Ala
TGC
-
¡û
>A171006989
CP019893
Euryarchaeota
Natrarchaeobaculum aegyptiacum JW/NM-HA 15 [CP019893]
108835
108908
+
Ala
TGC
-
¡û
>A171007003
CP019893
Euryarchaeota
Natrarchaeobaculum aegyptiacum JW/NM-HA 15 [CP019893]
1872737
1872810
+
Ala
TGC
-
¡û
>W1910006932
BBMP01000022
Euryarchaeota
Halococcus sediminicola CBA1101 [BBMP]
276569
276498
-
Ala
TGC
[ENA]
¡û
>W1910230464
FORO01000070
Euryarchaeota
Natronobacterium gregoryi SP2 [FORO]
3469
3396
-
Ala
TGC
[ENA]
¡û
>W1910826084
MWPH01000001
Euryarchaeota
Natronolimnobius baerhuensis CGMCC 1.3597 [MWPH]
1302464
1302537
+
Ala
TGC
[ENA]
¡û
>W1911591355
PKKI01000104
Euryarchaeota
Natronobacterium gregoryi SP2 [PKKI]
1801
1874
+
Ala
TGC
[ENA]
¡û
>W1911824365
QZWE01000032
Euryarchaeota
Halococcus sp. IIIV-5B [QZWE]
19297
19226
-
Ala
TGC
[ENA]
¡û
>W1610004113
AGIM01000014
Euryarchaeota
Natronobacterium gregoryi SP2 [AGIM]
67307
67234
-
Ala
TGC
[ENA]
¡û
>W1610005331
AJRK01000365
Euryarchaeota
Halococcus hamelinensis 100A6 [AJRK]
1953
2024
+
Ala
TGC
[ENA]
¡û
>W1610012060
AOHZ01000097
Euryarchaeota
Natronolimnohabitans innermongolicus JCM 12255 [AOHZ]
571
498
-
Ala
TGC
[ENA]
¡û
>W1610012162
AOIC01000047
Euryarchaeota
Natronobacterium gregoryi SP2 [AOIC]
16843
16770
-
Ala
TGC
[ENA]
¡û
>W1610012641
AOIQ01000016
Euryarchaeota
Halovivax asiaticus JCM 14624 [AOIQ]
16914
16987
+
Ala
TGC
[ENA]
¡û
>W1610014436
AOLZ01000059
Euryarchaeota
Halobiforma lacisalsi AJ5 [AOLZ]
45
118
+
Ala
TGC
[ENA]
¡û
>W1610014495
AOMB01000011
Euryarchaeota
Halococcus hamelinensis 100A6 [AOMB]
44934
45005
+
Ala
TGC
[ENA]
¡û
>W1610014538
AOMC01000054
Euryarchaeota
Halococcus morrhuae DSM 1307 [AOMC]
62967
63038
+
Ala
TGC
[ENA]
¡û
>W1610014596
AOMD01000030
Euryarchaeota
Halococcus saccharolyticus DSM 5350 [AOMD]
118735
118806
+
Ala
TGC
[ENA]
¡û
>W1610014638
AOME01000075
Euryarchaeota
Halococcus salifodinae DSM 8989 [AOME]
29632
29703
+
Ala
TGC
[ENA]
¡û
>W1610014653
AOMF01000040
Euryarchaeota
Halococcus thailandensis JCM 13552 [AOMF]
273
202
-
Ala
TGC
[ENA]
¡û
>W1610040548
BAFM01000010
Euryarchaeota
Halococcus agarilyticus 197A [BAFM]
107095
107166
+
Ala
TGC
[ENA]
¡û
>W1610041357
BANO01000323
Euryarchaeota
Halarchaeum acidiphilum MH1-52-1 [BANO]
1844
1917
+
Ala
TGC
[ENA]
¡û
>W1610041554
BATA01000133
Euryarchaeota
Halarchaeum acidiphilum MH1-52-1 JCM 16109 [BATA]
1856
1929
+
Ala
TGC
[ENA]
¡û
>W1610083002
CBMA010000055
Euryarchaeota
Halopiger djelfimassiliensis IIH2 [CBMA]
1901
1974
+
Ala
TGC
[ENA]
¡û
>W1610083044
CBMB010000011
Euryarchaeota
Halopiger goleimassiliensis IIH3 [CBMB]
3134
3061
-
Ala
TGC
[ENA]
¡û
>W1610671378
LKCV01000129
Euryarchaeota
Haloterrigena turkmenica WANU15 [LKCV]
3287
3214
-
Ala
TGC
[ENA]
¡û
Identical group No.655627 (16 seq.)
>A171000017
AM774415
Euryarchaeota
Halobacterium salinarum R1 DSM 671 [AM774415]
1865199
1865274
+
Ala
TGC
-
¡û
>A171003753
CP005962
Euryarchaeota
Salinarchaeum sp. Harcht-Bsk1 [CP005962]
1165646
1165573
-
Ala
TGC
-
¡û
>A171004163
CP007060
Euryarchaeota
Halobacterium sp. DL1 [CP007060]
192947
193022
+
Ala
TGC
-
¡û
>A171007428
LN831302
Euryarchaeota
Halobacterium hubeiense JI20-1 [LN831302]
35799
35874
+
Ala
TGC
-
¡û
>At0813
AE004437
Euryarchaeota
Halobacterium salinarum NRC-1; ATCC 700922 [AE004437]
1877083
1877154
+
Ala
TGC
[Ensembl]
¡û
>At1710
CR936257
Euryarchaeota
Natronomonas pharaonis DSM 2160 Gabara [CR936257]
214367
214296
-
Ala
TGC
[Ensembl]
¡û
>W1911709987
QPND01000009
Euryarchaeota
Saliphagus sp. LR7 [QPND]
37682
37609
-
Ala
TGC
[ENA]
¡û
>W1610004190
AGIR01000001
Euryarchaeota
Halobacterium sp. DL1 [AGIR]
318693
318618
-
Ala
TGC
[ENA]
¡û
>W1610061870
BCMZ01000001
Euryarchaeota
Halobacterium sp. CBA1132 [BCMZ]
2566738
2566813
+
Ala
TGC
[ENA]
¡û
>W1610085068
CEML01000001
Euryarchaeota
Halobacterium hubeiense JI20-4 [CEML]
1299560
1299635
+
Ala
TGC
[ENA]
¡û
>W1610085133
CEMN01000001
Euryarchaeota
Halobacterium hubeiense JI20-3 [CEMN]
160080
160005
-
Ala
TGC
[ENA]
¡û
>W1610085172
CEMO01000001
Euryarchaeota
Halobacterium hubeiense JI20-2 [CEMO]
202281
202206
-
Ala
TGC
[ENA]
¡û
>W1610085211
CEMP01000001
Euryarchaeota
Halobacterium hubeiense JI20-6 [CEMP]
201896
201821
-
Ala
TGC
[ENA]
¡û
>W1610085234
CEMQ01000001
Euryarchaeota
Halobacterium hubeiense JI20-7 [CEMQ]
2356884
2356959
+
Ala
TGC
[ENA]
¡û
>W1610085267
CEMR01000001
Euryarchaeota
Halobacterium hubeiense JI20-5 [CEMR]
1299644
1299719
+
Ala
TGC
[ENA]
¡û
>W1610085316
CEMZ01000001
Euryarchaeota
Halobacterium hubeiense JI20-8 [CEMZ]
2313488
2313563
+
Ala
TGC
[ENA]
¡û
Identical group No.673075 (15 seq.)
>PL171000345
CP001933
Euryarchaeota
Natrialba magadii ATCC 43099 plasmid:pNMAG01
372914
372841
-
Ala
TGC
[ENA]
¡û
>A171001285
CP001932
Euryarchaeota
Natrialba magadii ATCC 43099 [CP001932]
28475
28548
+
Ala
TGC
-
¡û
>A171001318
CP001932
Euryarchaeota
Natrialba magadii ATCC 43099 [CP001932]
1684311
1684238
-
Ala
TGC
-
¡û
>W1610001045
ACIT01000002
Euryarchaeota
Natrialba magadii ATCC 43099 [ACIT]
32035
32108
+
Ala
TGC
[ENA]
¡û
>W1610011702
AOHS01000001
Euryarchaeota
Natrialba magadii ATCC 43099 MS-3 [AOHS]
136
209
+
Ala
TGC
[ENA]
¡û
>W1610011712
AOHS01000020
Euryarchaeota
Natrialba magadii ATCC 43099 MS-3 [AOHS]
131
204
+
Ala
TGC
[ENA]
¡û
>W1610012450
AOIL01000067
Euryarchaeota
Natrialba taiwanensis DSM 12281 [AOIL]
827
756
-
Ala
TGC
[ENA]
¡û
>W1610012472
AOIM01000020
Euryarchaeota
Natrialba hulunbeirensis JCM 10989 [AOIM]
345
272
-
Ala
TGC
[ENA]
¡û
>W1610012473
AOIM01000020
Euryarchaeota
Natrialba hulunbeirensis JCM 10989 [AOIM]
88
15
-
Ala
TGC
[ENA]
¡û
>W1610012504
AOIN01000025
Euryarchaeota
Natrialba chahannaoensis JCM 10990 [AOIN]
3102
3029
-
Ala
TGC
[ENA]
¡û
>W1610012528
AOIN01000072
Euryarchaeota
Natrialba chahannaoensis JCM 10990 [AOIN]
190
117
-
Ala
TGC
[ENA]
¡û
>W1610012578
AOIO01000040
Euryarchaeota
Natrialba asiatica DSM 12278 [AOIO]
404641
404714
+
Ala
TGC
[ENA]
¡û
>W1610012579
AOIP01000001
Euryarchaeota
Natrialba aegyptia DSM 13077 [AOIP]
172
245
+
Ala
TGC
[ENA]
¡û
>W1610012582
AOIP01000004
Euryarchaeota
Natrialba aegyptia DSM 13077 [AOIP]
82
9
-
Ala
TGC
[ENA]
¡û
>W1610671385
LKCV01000147
Euryarchaeota
Haloterrigena turkmenica WANU15 [LKCV]
1722
1795
+
Ala
TGC
[ENA]
¡û
Identical group No.720690 (1 seq.)
>A171004716
CP009505
Euryarchaeota
Methanosarcina sp. MTP4 [CP009505]
46582
46653
+
Ala
TGC
-
¡û
Identical group No.756838 (2 seq.)
>A171000420
CP001338
Euryarchaeota
Methanosphaerula palustris E1-9c [CP001338]
356259
356187
-
Ala
TGC
-
¡û
>W1610001012
ABZB01000003
Euryarchaeota
Methanosphaerula palustris palustris E1-9c [ABZB]
517682
517610
-
Ala
TGC
[ENA]
¡û
Identical group No.756851 (2 seq.)
>A171006682
CP016070
Euryarchaeota
Halodesulfurarchaeum formicicum HTSR1 [CP016070]
186565
186636
+
Ala
TGC
-
¡û
>A171006724
CP016804
Euryarchaeota
Halodesulfurarchaeum formicicum HSR6 [CP016804]
187242
187313
+
Ala
TGC
-
¡û
Identical group No.761244 (2 seq.)
>C151003926
CP002988
Euryarchaeota
halophilic archaeon DL31 [CP002988]
2130384
2130313
-
Ala
TGC
[Ensembl]
¡û
>C151003938
CP002988
Euryarchaeota
halophilic archaeon DL31 [CP002988]
933127
933056
-
Ala
TGC
[Ensembl]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
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