tRNA genes clustered and arranged according to each identical group

Fossil microbial community from Whale Fall (the West Antarctic Peninsula Shelf)

Anticodon = TAA

HIT: 4 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.73109 (57 seq.)
>W1711069218 LSFM01000023 Bacteroidota Polaribacter vadi [LSFM] 35874 35962 + Leu TAA [ENA] ¡û
>W1711167266 LVWE01000029 Bacteroidota Polaribacter atrinae [LVWE] 76114 76202 + Leu TAA [ENA] ¡û
>W1711167267 LVWE01000029 Bacteroidota Polaribacter atrinae [LVWE] 76537 76625 + Leu TAA [ENA] ¡û
>W131175289 ARJD01000050 Bacteroidota Polaribacter franzmannii ATCC 700399 [ARJD] 2628 2540 - Leu TAA [ENA] ¡û
>W131175308 ARJD01000068 Bacteroidota Polaribacter franzmannii ATCC 700399 [ARJD] 16866 16954 + Leu TAA [ENA] ¡û
>W1712097622 NIDK01000009 Bacteroidota Polaribacter haliotis [NIDK] 164234 164146 - Leu TAA [ENA] ¡û
>C171063233 CP017477 Bacteroidota Polaribacter vadi LPB0003 [CP017477] 2198688 2198776 + Leu TAA - ¡û
>w014166 AAOG01000001 Bacteroidota Polaribacter irgensii 23-P [AAOG] 300789 300879 + Leu TAA [ENA] ¡û
>WENV180101499 OAOV01000544 [OAOV] marine metagenome; ENVO:00002010 672 586 - Leu TAA [ENA] ¢þ
>WENV180102832 OAOZ01025578 [OAOZ] marine metagenome; ENVO:00002010 209 295 + Leu TAA [ENA] ¢þ
>WENV180356663 OBNL01005326 [OBNL] marine metagenome; ENVO:00002010 732 646 - Leu TAA [ENA] ¢þ
>WENV180399463 OBQH01037847 [OBQH] marine metagenome; ENV:00002010 255 169 - Leu TAA [ENA] ¢þ
>WENV180585248 OCOK01057839 [OCOK] marine metagenome; ENVO:00002010 194 280 + Leu TAA [ENA] ¢þ
>WENV180590403 OCOT01009510 [OCOT] marine metagenome; ENVO:00002010 234 148 - Leu TAA [ENA] ¢þ
>WENV181323984 OFLA01000666 [OFLA] marine metagenome; seawater 396 484 + Leu TAA [ENA] ¢þ
>WENV181393077 OFRX01041560 [OFRX] seawater metagenome; seawater 477 391 - Leu TAA [ENA] ¢þ
>WENV182547663 OJBT01000318 [OJBT] seawater metagenome; Sea water 4331 4417 + Leu TAA [ENA] ¢þ
>WENV182554833 OJCW01017971 [OJCW] seawater metagenome; Sea water 357 443 + Leu TAA [ENA] ¢þ
>WENV182558137 OJDL01006531 [OJDL] seawater metagenome; Sea water 982 1068 + Leu TAA [ENA] ¢þ
>WENV182560329 OJDU01000010 [OJDU] seawater metagenome; Sea water 50238 50152 - Leu TAA [ENA] ¢þ
>WENV182564419 OJEF01000062 [OJEF] seawater metagenome; Sea water 26445 26531 + Leu TAA [ENA] ¢þ
>WENV182567322 OJEO01000072 [OJEO] seawater metagenome; Sea water 12748 12834 + Leu TAA [ENA] ¢þ
>WENV182567833 OJEP01000526 [OJEP] seawater metagenome; Sea water 6963 7049 + Leu TAA [ENA] ¢þ
>WENV182578661 OJGP01000025 [OJGP] seawater metagenome; Sea water 14576 14490 - Leu TAA [ENA] ¢þ
>WENV182588905 OJHY01001730 [OJHY] seawater metagenome; Sea water 891 977 + Leu TAA [ENA] ¢þ
>WENV183056077 OLHI01000012 [OLHI] seawater metagenome; Sea water 59014 59100 + Leu TAA [ENA] ¢þ
>WENV183061287 OLHZ01002720 [OLHZ] seawater metagenome; Sea water 2737 2823 + Leu TAA [ENA] ¢þ
>WENV183064814 OLII01000963 [OLII] seawater metagenome; Sea water 9618 9532 - Leu TAA [ENA] ¢þ
>WENV183622689 OOFW01001963 [OOFW] marine metagenome; sea ice 2376 2290 - Leu TAA [ENA] ¢þ
>WENV183623439 OOGA01001153 [OOGA] marine metagenome; sea ice 560 474 - Leu TAA [ENA] ¢þ
>WENV183629444 OOGP01042526 [OOGP] marine metagenome; seawater 477 391 - Leu TAA [ENA] ¢þ
>WENV183630446 OOGS01016395 [OOGS] marine metagenome; seawater 618 704 + Leu TAA [ENA] ¢þ
>WENV170599191 FUWD010066377 [FUWD] metagenome; unknown 176 264 + Leu TAA [ENA] ¢þ
>WENV170600502 FUWD010129775 [FUWD] metagenome; unknown 456 368 - Leu TAA [ENA] ¢þ
>WENV170615894 FUWD012871365 [FUWD] metagenome; unknown 209 121 - Leu TAA [ENA] ¢þ
>WENV170619436 FUWD013014207 [FUWD] metagenome; unknown 474 562 + Leu TAA [ENA] ¢þ
>WENV170625254 FUWD013194273 [FUWD] metagenome; unknown 2491 2403 - Leu TAA [ENA] ¢þ
>WENV170626738 FUWD013229186 [FUWD] metagenome; unknown 3557 3645 + Leu TAA [ENA] ¢þ
>WENV170626822 FUWD013229720 [FUWD] metagenome; unknown 1577 1489 - Leu TAA [ENA] ¢þ
>WENV170627461 FUWD013232879 [FUWD] metagenome; unknown 736 648 - Leu TAA [ENA] ¢þ
>WENV170630231 FUWD013299508 [FUWD] metagenome; unknown 9150 9238 + Leu TAA [ENA] ¢þ
>WENV170826619 MDSY01113843 [MDSY] marine metagenome; seawater 3603 3515 - Leu TAA [ENA] ¢þ
>WENV170918718 MDTF01002754 [MDTF] marine metagenome; seawater 8893 8981 + Leu TAA [ENA] ¢þ
>WENV170949549 MEHZ011430554 [MEHZ] marine metagenome; marine surface water 293 205 - Leu TAA [ENA] ¢þ
>C181113412 CP025119 Bacteroidota Polaribacter sp. ALD11 [CP025119] 2795817 2795731 - Leu TAA - ¡û
>W141563390 JHZZ01000001 Bacteroidota Polaribacter sp. Hel_I_88 [JHZZ] 1645320 1645408 + Leu TAA [ENA] ¡û
>W1910785541 MQUA01000013 Bacteroidota Polaribacter filamentus ATCC 700397 [MQUA] 3073219 3073307 + Leu TAA [ENA] ¡û
>W1910796559 MSCK01000002 Bacteroidota Polaribacter butkevichii KCTC 12100 [MSCK] 1078891 1078805 - Leu TAA [ENA] ¡û
>W1910796560 MSCK01000002 Bacteroidota Polaribacter butkevichii KCTC 12100 [MSCK] 1078458 1078372 - Leu TAA [ENA] ¡û
>W1910796630 MSCM01000002 Bacteroidota Polaribacter glomeratus ATCC 43844 [MSCM] 901592 901506 - Leu TAA [ENA] ¡û
>W1810173121 PJMV01000001 Bacteroidota Polaribacter sp. Hel1_33_96 [PJMV] 3072149 3072235 + Leu TAA [ENA] ¡û
>W1511296855 JPDI01000001 Bacteroidota Polaribacter sp. Hel1_33_49 [JPDI] 1198287 1198375 + Leu TAA [ENA] ¡û
>W1610909746 LSFM01000023 Bacteroidota Polaribacter vadi [LSFM] 35874 35962 + Leu TAA [ENA] ¡û
>W1610977597 LVWE01000029 Bacteroidota Polaribacter atrinae [LVWE] 76114 76202 + Leu TAA [ENA] ¡û
>W1610977598 LVWE01000029 Bacteroidota Polaribacter atrinae [LVWE] 76537 76625 + Leu TAA [ENA] ¡û
>WENV078477 AAGA01021200 Fossil microbial community from Whale Fall (the West Antarctic Peninsula Shelf) 672 582 - Leu TAA [ENA]
>WENV081241 ABEF01037906 Marine planktonic communities from Hawaii Ocean Times Series Station (HOT/ALOHA) 874 964 + Leu TAA [ENA]
Identical group No.84102 (2 seq.)
>WENV170699449 LGVF01555670 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 752 666 - Leu TAA [ENA] ¢þ
>WENV078487 AAGA01022846 Fossil microbial community from Whale Fall (the West Antarctic Peninsula Shelf) 435 345 - Leu TAA [ENA]
Identical group No.117967 (16 seq.)
>C016458 CR954246 Gammaproteobacteria Pseudoalteromonas translucida TAC125 [CR954246, CR954247] 2022546 2022460 - Leu TAA [Ensembl] ¡û
>C016460 CR954246 Gammaproteobacteria Pseudoalteromonas translucida TAC125 [CR954246, CR954247] 2022280 2022194 - Leu TAA [Ensembl] ¡û
>C016463 CR954246 Gammaproteobacteria Pseudoalteromonas translucida TAC125 [CR954246, CR954247] 2021911 2021825 - Leu TAA [Ensembl] ¡û
>C181010579 CP011036 Gammaproteobacteria Pseudoalteromonas nigrifaciens KMM 661 [CP011036, CP011037] 2331601 2331515 - Leu TAA - ¡û
>C181010581 CP011036 Gammaproteobacteria Pseudoalteromonas nigrifaciens KMM 661 [CP011036, CP011037] 2331335 2331249 - Leu TAA - ¡û
>C181010584 CP011036 Gammaproteobacteria Pseudoalteromonas nigrifaciens KMM 661 [CP011036, CP011037] 2330965 2330879 - Leu TAA - ¡û
>W1911203740 NRGZ01000001 Gammaproteobacteria Pseudoalteromonas sp. JB197 [NRGZ] 1677663 1677577 - Leu TAA [ENA] ¡û
>W1911203742 NRGZ01000001 Gammaproteobacteria Pseudoalteromonas sp. JB197 [NRGZ] 1677386 1677300 - Leu TAA [ENA] ¡û
>W1911203745 NRGZ01000001 Gammaproteobacteria Pseudoalteromonas sp. JB197 [NRGZ] 1677018 1676932 - Leu TAA [ENA] ¡û
>C161031188 CP011034 Gammaproteobacteria Pseudoalteromonas translucida KMM 520 [CP011034, CP011035] 2195915 2195829 - Leu TAA [Ensembl] ¡û
>C161031190 CP011034 Gammaproteobacteria Pseudoalteromonas translucida KMM 520 [CP011034, CP011035] 2195649 2195563 - Leu TAA [Ensembl] ¡û
>C161031192 CP011034 Gammaproteobacteria Pseudoalteromonas translucida KMM 520 [CP011034, CP011035] 2195372 2195286 - Leu TAA [Ensembl] ¡û
>C161031195 CP011034 Gammaproteobacteria Pseudoalteromonas translucida KMM 520 [CP011034, CP011035] 2195003 2194917 - Leu TAA [Ensembl] ¡û
>WENV078364 AAGA01002207 Fossil microbial community from Whale Fall (the West Antarctic Peninsula Shelf) 252 340 + Leu TAA [ENA]
>WENV078366 AAGA01002207 Fossil microbial community from Whale Fall (the West Antarctic Peninsula Shelf) 518 606 + Leu TAA [ENA]
>WENV078369 AAGA01002207 Fossil microbial community from Whale Fall (the West Antarctic Peninsula Shelf) 888 976 + Leu TAA [ENA]
Identical group No.416800 (2 seq.)
>w013972 AAOB01000007 Actinomycetota marine actinobacterium PHSC20C1 [AAOB] 38119 38197 + Leu TAA [ENA] ¡û
>WENV078390 AAGA01005616 Fossil microbial community from Whale Fall (the West Antarctic Peninsula Shelf) 180 258 + Leu TAA [ENA]
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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