tRNA genes clustered and arranged according to each identical group

Fossil microbiome from Mammuthus primigenius

Anticodon = CAT

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.276119 (25 seq.)
>W1710865652 LMGV01000009 Actinomycetota Nocardioides sp. Root614 [LMGV] 5991 6067 + Met CAT [ENA] ¡û
>W1710866351 LMHJ01000006 Actinomycetota Nocardioides sp. Root682 [LMHJ] 5991 6067 + Met CAT [ENA] ¡û
>W1710880664 LMSM01000006 Actinomycetota Nocardioides sp. Soil774 [LMSM] 19480 19406 - Met CAT [ENA] ¡û
>W1710880944 LMSR01000017 Actinomycetota Nocardioides sp. Soil797 [LMSR] 241061 240987 - Met CAT [ENA] ¡û
>W1712084132 NHQT01000006 Actinomycetota Nocardioides sp. XL1 [NHQT] 17460 17384 - Met CAT [ENA] ¡û
>W131190810 ASEP01000116 Actinomycetota Nocardioides sp. CF8 [ASEP] 31868 31944 + Met CAT [ENA] ¡û
>W131229401 AUGT01000023 Actinomycetota Nocardioides halotolerans DSM 19273 [AUGT] 100141 100215 + Met CAT [ENA] ¡û
>C015195 CP000509 Actinomycetota Nocardioides sp. JS614 [CP000509] 2095934 2096010 + Met CAT [Ensembl] ¡û
>WENV180690727 OCZS010020461 [OCZS] soil metagenome; soil 569 645 + Ile2 CAT [ENA] ¢þ
>WENV181162392 OEIN01121802 [OEIN] soil metagenome; soil 164 90 - Ile2 CAT [ENA] ¢þ
>WENV170552171 CXWJ01042489 [CXWJ] wastewater metagenome; activated sludge 757 681 - Met CAT [ENA] ¢þ
>C191158874 CP038267 Actinomycetota Nocardioides euryhalodurans MMS17-SY117 [CP038267] 948285 948210 - Met CAT - ¡û
>W141815879 JQJL01000019 Actinomycetota Nocardioides sp. UNC345MFTsu5.1 [JQJL] 13800 13724 - Met CAT [ENA] ¡û
>W09103283 AAJB01000084 Actinomycetota Nocardioides sp. JS614 [AAJB] 13883 13807 - Met CAT [ENA] ¡û
>W1911672128 QGDD01000008 Actinomycetota Nocardioides silvaticus CCTCC AB 2018079 [QGDD] 13558 13482 - Met CAT [ENA] ¡û
>W1810462634 PZYX01000009 Actinomycetota Nocardioides allogilvus KCTC 49020 [PZYX] 8336 8261 - Met CAT [ENA] ¡û
>C161082879 CP015079 Actinomycetota Nocardioides dokdonensis FR1436 [CP015079] 3937279 3937203 - Met CAT [Ensembl] ¡û
>W1610727998 LMGV01000009 Actinomycetota Nocardioides sp. Root614 [LMGV] 5991 6067 + Met CAT [ENA] ¡û
>W1610728697 LMHJ01000006 Actinomycetota Nocardioides sp. Root682 [LMHJ] 5991 6067 + Met CAT [ENA] ¡û
>W1610743010 LMSM01000006 Actinomycetota Nocardioides sp. Soil774 [LMSM] 19480 19406 - Met CAT [ENA] ¡û
>W1610743290 LMSR01000017 Actinomycetota Nocardioides sp. Soil797 [LMSR] 241061 240987 - Met CAT [ENA] ¡û
>WENV080843 ABEF01006373 Marine planktonic communities from Hawaii Ocean Times Series Station (HOT/ALOHA) 290 214 - Met CAT [ENA]
>WENV086968 CAAM02028534 Fossil microbiome from Mammuthus primigenius 20 96 + Met CAT [ENA]
>W1710523590 FNIC01000007 Actinomycetota Nocardioides szechwanensis [FNIC] 25457 25381 - Met CAT [ENA] ¡û
>W1710564153 FOQG01000026 Actinomycetota Nocardioides psychrotolerans [FOQG] 9158 9084 - Met CAT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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